RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 KLK3P07288 261 aaPredicted RBP5.86□□□□□ -1.47
SF3B1-209ENST00000479532 BPGMP07738 259 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 SBK3P0C264 359 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 FGF3P11487 239 aaPredicted RBP5.86□□□□□ -1.47
SF3B1-209ENST00000479532 PCNAP12004 261 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 FGF5P12034 268 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 CCL4P13236 92 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 HGFP14210 728 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 CREB1P16220 341 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 ITIH1P19827 911 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 ZNF10P21506 573 aaPredicted RBP5.86□□□□□ -1.47
SF3B1-209ENST00000479532 AGXTP21549 392 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 HMOX2P30519 316 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 AHRP35869 848 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 CASP2P42575 452 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 NAGLUP54802 743 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 PKNOX1P55347 436 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 ERVPABLB-1P60509 514 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 STXBP1P61764 594 aaKnown RBP5.86□□□□□ -1.47
SF3B1-209ENST00000479532 CTAG1AP78358 180 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 PRR5P85299 388 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 SHC2P98077 582 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 TGM3Q08188 693 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 LCP2Q13094 533 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 DOC2AQ14183 400 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 RTP5Q14D33 572 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 PCLAFQ15004 111 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 PDCD1Q15116 288 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 ZIC1Q15915 447 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 DEFB110Q30KQ9 67 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 PLEKHN1Q494U1 663 aaPredicted RBP5.86□□□□□ -1.47
SF3B1-209ENST00000479532 GGTA1PQ4G0N0 100 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 ZNF385BQ569K4 471 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 MANEAQ5SRI9 462 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 GARNL3Q5VVW2 1013 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 ATG16L1Q676U5 607 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 NXNQ6DKJ4 435 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 PGM2L1Q6PCE3 622 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 TMIGD1Q6UXZ0 262 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 LRRC74BQ6ZQY2 392 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 FRMD7Q6ZUT3 714 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 GPRIN3Q6ZVF9 776 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 ABHD13Q7L211 337 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 ASPGQ86U10 573 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 C10orf107Q8IVU9 208 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 CSNK1A1LQ8N752 337 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 MFSD9Q8NBP5 474 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 MINDY2Q8NBR6 621 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 C1orf162Q8NEQ5 155 aaPredicted RBP5.86□□□□□ -1.47
SF3B1-209ENST00000479532 OR4K1Q8NGD4 311 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 RAB3IL1Q8TBN0 382 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 MGARPQ8TDB4 240 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 SLC13A3Q8WWT9 602 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 ASB15Q8WXK1 588 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 ZNF501Q96CX3 271 aaPredicted RBP5.86□□□□□ -1.47
SF3B1-209ENST00000479532 WDR34Q96EX3 536 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 CNDP1Q96KN2 507 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 ZNF578Q96N58 590 aaPredicted RBP5.86□□□□□ -1.47
SF3B1-209ENST00000479532 ZNF382Q96SR6 550 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 C17orf62Q9BQA9 187 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 NTMT1Q9BV86 223 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 SARGQ9BW04 601 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 ULBP3Q9BZM4 244 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 ELOVL6Q9H5J4 265 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 PLGRKTQ9HBL7 147 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 FAM60AQ9NP50 221 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 PFDN4Q9NQP4 134 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 SIDT1Q9NXL6 827 aaKnown RBP5.86□□□□□ -1.47
SF3B1-209ENST00000479532 CRNNQ9UBG3 495 aaPredicted RBP5.86□□□□□ -1.47
SF3B1-209ENST00000479532 TRPS1Q9UHF7 1281 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 ZFP69BQ9UJL9 534 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 PILRAQ9UKJ1 303 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 KLK13Q9UKR3 277 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 CDC14AQ9UNH5 594 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 PCDHGA7Q9Y5G6 932 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 PCDHGA3Q9Y5H0 932 aa5.86□□□□□ -1.47
SF3B1-209ENST00000479532 PIEZO1Q92508 2521 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 IGKV1-8A0A0C4DH67 115 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 HYKKA2RU49 373 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 WDR91A4D1P6 747 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 TRABD2BA6NFA1 517 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 LRRC14BA6NHZ5 514 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 TMEM114B3SHH9 223 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 H0YGG7 62 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 H0YIV9 168 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 H3BNX3 289 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 STMND1H3BQB6 276 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 NDUFS4O43181 175 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 ZNF749O43361 778 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 HNRNPRO43390 633 aaKnown RBP5.85□□□□□ -1.47
SF3B1-209ENST00000479532 PRAMEF10O60809 474 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 CTSVO60911 334 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 PDE5AO76074 875 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 ESRRBO95718 433 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 HSPA4LO95757 839 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 KRT6AP02538 564 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 KRT6BP04259 564 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 SERPINE1P05121 402 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 CD63P08962 238 aa5.85□□□□□ -1.47
SF3B1-209ENST00000479532 CHN1P15882 459 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms