RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 KRT6AP02538 564 aa21.66■■□□□ 1.06
C9orf3-215ENST00000478473 KRT6BP04259 564 aa21.66■■□□□ 1.06
C9orf3-215ENST00000478473 AGAP20933 346 aa21.66■■□□□ 1.06
C9orf3-215ENST00000478473 CNR1P21554 472 aa21.66■■□□□ 1.06
C9orf3-215ENST00000478473 KRT6CP48668 564 aa21.66■■□□□ 1.06
C9orf3-215ENST00000478473 PKNOX1P55347 436 aa21.66■■□□□ 1.06
C9orf3-215ENST00000478473 TRA2BP62995 288 aaKnown RBP21.66■■□□□ 1.06
C9orf3-215ENST00000478473 FUT7Q11130 342 aa21.66■■□□□ 1.06
C9orf3-215ENST00000478473 GTF3C1Q12789 2109 aa21.66■■□□□ 1.06
C9orf3-215ENST00000478473 CSTF3Q12996 717 aaKnown RBP21.66■■□□□ 1.06
C9orf3-215ENST00000478473 LCP2Q13094 533 aa21.66■■□□□ 1.06
C9orf3-215ENST00000478473 HYAL4Q2M3T9 481 aa21.66■■□□□ 1.06
C9orf3-215ENST00000478473 CMPK2Q5EBM0 449 aa21.66■■□□□ 1.06
C9orf3-215ENST00000478473 CCNYL2Q5T2Q4 361 aa21.66■■□□□ 1.06
C9orf3-215ENST00000478473 GPRIN3Q6ZVF9 776 aa21.66■■□□□ 1.06
C9orf3-215ENST00000478473 OR2M7Q8NG81 312 aa21.66■■□□□ 1.06
C9orf3-215ENST00000478473 CHTF18Q8WVB6 975 aa21.66■■□□□ 1.06
C9orf3-215ENST00000478473 VPS29Q9UBQ0 182 aa21.66■■□□□ 1.06
C9orf3-215ENST00000478473 TBK1Q9UHD2 729 aa21.66■■□□□ 1.06
C9orf3-215ENST00000478473 C1orf226A1L170 272 aa21.65■■□□□ 1.06
C9orf3-215ENST00000478473 G3V2L1 256 aa21.65■■□□□ 1.06
C9orf3-215ENST00000478473 OR10H2O60403 315 aa21.65■■□□□ 1.06
C9orf3-215ENST00000478473 GLSO94925 669 aaPredicted RBP21.65■■□□□ 1.06
C9orf3-215ENST00000478473 SHBGP04278 402 aa21.65■■□□□ 1.06
C9orf3-215ENST00000478473 PIK3R1P27986 724 aa21.65■■□□□ 1.06
C9orf3-215ENST00000478473 MAPK12P53778 367 aa21.65■■□□□ 1.06
C9orf3-215ENST00000478473 ERVK-8P63133 956 aa21.65■■□□□ 1.06
C9orf3-215ENST00000478473 ASPHQ12797 758 aa21.65■■□□□ 1.06
C9orf3-215ENST00000478473 EBPQ15125 230 aaKnown RBP21.65■■□□□ 1.06
C9orf3-215ENST00000478473 SGO1Q5FBB7 561 aa21.65■■□□□ 1.06
C9orf3-215ENST00000478473 SLC48A1Q6P1K1 146 aa21.65■■□□□ 1.06
C9orf3-215ENST00000478473 SLC34A3Q8N130 599 aa21.65■■□□□ 1.06
C9orf3-215ENST00000478473 ZNF808Q8N4W9 903 aaPredicted RBP21.65■■□□□ 1.06
C9orf3-215ENST00000478473 GBP7Q8N8V2 638 aaPredicted RBP21.65■■□□□ 1.06
C9orf3-215ENST00000478473 ZNF441Q8N8Z8 693 aa21.65■■□□□ 1.06
C9orf3-215ENST00000478473 OR4K14Q8NGD5 310 aa21.65■■□□□ 1.06
C9orf3-215ENST00000478473 SLC22A8Q8TCC7 542 aa21.65■■□□□ 1.06
C9orf3-215ENST00000478473 TM4SF18Q96CE8 201 aa21.65■■□□□ 1.06
C9orf3-215ENST00000478473 C11orf24Q96F05 449 aaPredicted RBP21.65■■□□□ 1.06
C9orf3-215ENST00000478473 ZDHHC11Q9H8X9 412 aa21.65■■□□□ 1.06
C9orf3-215ENST00000478473 ERVK-19Q9WJR5 959 aa21.65■■□□□ 1.06
C9orf3-215ENST00000478473 KLF2Q9Y5W3 355 aaPredicted RBP21.65■■□□□ 1.06
C9orf3-215ENST00000478473 NCOA6Q14686 2063 aaPredicted RBP21.65■■□□□ 1.06
C9orf3-215ENST00000478473 NOTCH2Q04721 2471 aa21.65■■□□□ 1.06
C9orf3-215ENST00000478473 CELSR2Q9HCU4 2923 aa21.65■■□□□ 1.06
C9orf3-215ENST00000478473 CENPEQ02224 2701 aa21.64■■□□□ 1.06
C9orf3-215ENST00000478473 ARHGAP10A1A4S6 786 aa21.64■■□□□ 1.05
C9orf3-215ENST00000478473 PINLYPA6NC86 204 aa21.64■■□□□ 1.05
C9orf3-215ENST00000478473 TFECO14948 347 aaPredicted RBP21.64■■□□□ 1.05
C9orf3-215ENST00000478473 ESRRBO95718 433 aa21.64■■□□□ 1.05
C9orf3-215ENST00000478473 ENO1P06733 434 aaKnown RBP21.64■■□□□ 1.05
C9orf3-215ENST00000478473 CRHR1P34998 444 aa21.64■■□□□ 1.05
C9orf3-215ENST00000478473 DCTP40126 519 aa21.64■■□□□ 1.05
C9orf3-215ENST00000478473 GPR85P60893 370 aa21.64■■□□□ 1.05
C9orf3-215ENST00000478473 FOXO1Q12778 655 aa21.64■■□□□ 1.05
C9orf3-215ENST00000478473 ZNF267Q14586 743 aaPredicted RBP21.64■■□□□ 1.05
C9orf3-215ENST00000478473 ZNF750Q32MQ0 723 aa21.64■■□□□ 1.05
C9orf3-215ENST00000478473 ZYG11AQ6WRX3 759 aa21.64■■□□□ 1.05
C9orf3-215ENST00000478473 RNF111Q6ZNA4 994 aa21.64■■□□□ 1.05
C9orf3-215ENST00000478473 SLC29A4Q7RTT9 530 aa21.64■■□□□ 1.05
C9orf3-215ENST00000478473 CDYL2Q8N8U2 506 aa21.64■■□□□ 1.05
C9orf3-215ENST00000478473 PAQR8Q8TEZ7 354 aa21.64■■□□□ 1.05
C9orf3-215ENST00000478473 PHF10Q8WUB8 498 aaKnown RBP21.64■■□□□ 1.05
C9orf3-215ENST00000478473 TP53INP1Q96A56 240 aa21.64■■□□□ 1.05
C9orf3-215ENST00000478473 FAM173AQ9BQD7 235 aa21.64■■□□□ 1.05
C9orf3-215ENST00000478473 CNPPD1Q9BV87 410 aa21.64■■□□□ 1.05
C9orf3-215ENST00000478473 WWTR1Q9GZV5 400 aa21.64■■□□□ 1.05
C9orf3-215ENST00000478473 GSTO2Q9H4Y5 243 aa21.64■■□□□ 1.05
C9orf3-215ENST00000478473 SIRT5Q9NXA8 310 aa21.64■■□□□ 1.05
C9orf3-215ENST00000478473 TINAGQ9UJW2 476 aa21.64■■□□□ 1.05
C9orf3-215ENST00000478473 CRYBG3Q68DQ2 2970 aa21.64■■□□□ 1.05
C9orf3-215ENST00000478473 A0A1W2PS29 197 aa21.63■■□□□ 1.05
C9orf3-215ENST00000478473 H3BQF6 201 aa21.63■■□□□ 1.05
C9orf3-215ENST00000478473 HS6ST1O60243 411 aa21.63■■□□□ 1.05
C9orf3-215ENST00000478473 ULK1O75385 1050 aa21.63■■□□□ 1.05
C9orf3-215ENST00000478473 PROCP04070 461 aa21.63■■□□□ 1.05
C9orf3-215ENST00000478473 FBXO45P0C2W1 286 aa21.63■■□□□ 1.05
C9orf3-215ENST00000478473 CPMP14384 443 aa21.63■■□□□ 1.05
C9orf3-215ENST00000478473 COL8A1P27658 744 aa21.63■■□□□ 1.05
C9orf3-215ENST00000478473 PTGER1P34995 402 aa21.63■■□□□ 1.05
C9orf3-215ENST00000478473 XKP51811 444 aa21.63■■□□□ 1.05
C9orf3-215ENST00000478473 GALNT18Q6P9A2 607 aa21.63■■□□□ 1.05
C9orf3-215ENST00000478473 XKRXQ6PP77 449 aa21.63■■□□□ 1.05
C9orf3-215ENST00000478473 GK5Q6ZS86 529 aa21.63■■□□□ 1.05
C9orf3-215ENST00000478473 DOLPP1Q86YN1 238 aa21.63■■□□□ 1.05
C9orf3-215ENST00000478473 ZNF615Q8N8J6 731 aa21.63■■□□□ 1.05
C9orf3-215ENST00000478473 C17orf47Q8NEP4 570 aa21.63■■□□□ 1.05
C9orf3-215ENST00000478473 METTL6Q8TCB7 284 aa21.63■■□□□ 1.05
C9orf3-215ENST00000478473 SPACA9Q96E40 222 aaPredicted RBP21.63■■□□□ 1.05
C9orf3-215ENST00000478473 ANKZF1Q9H8Y5 726 aa21.63■■□□□ 1.05
C9orf3-215ENST00000478473 SACM1LQ9NTJ5 587 aa21.63■■□□□ 1.05
C9orf3-215ENST00000478473 MEMO1Q9Y316 297 aa21.63■■□□□ 1.05
C9orf3-215ENST00000478473 ITPR2Q14571 2701 aa21.62■■□□□ 1.05
C9orf3-215ENST00000478473 ADAM10O14672 748 aa21.62■■□□□ 1.05
C9orf3-215ENST00000478473 ATP1B1P05026 303 aa21.62■■□□□ 1.05
C9orf3-215ENST00000478473 S1PR1P21453 382 aa21.62■■□□□ 1.05
C9orf3-215ENST00000478473 CCT5P48643 541 aa21.62■■□□□ 1.05
C9orf3-215ENST00000478473 DNAJB13P59910 316 aa21.62■■□□□ 1.05
C9orf3-215ENST00000478473 ADORA2A-AS1P86434 159 aa21.62■■□□□ 1.05
C9orf3-215ENST00000478473 HSF1Q00613 529 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms