RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 OR4K14Q8NGD5 310 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 OR14A16Q8NHC5 309 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 CLHC1Q8NHS4 586 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 SLC2A12Q8TD20 617 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 DAZLQ92904 295 aaKnown RBP9.57□□□□□ -0.88
HDAC6-222ENST00000478095 C19orf60Q96EN9 201 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 VMP1Q96GC9 406 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 RBM18Q96H35 190 aaKnown RBP9.57□□□□□ -0.88
HDAC6-222ENST00000478095 C3orf30Q96M34 536 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 DEFB126Q9BYW3 111 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 ILKAPQ9H0C8 392 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-222ENST00000478095 CDCP1Q9H5V8 836 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 LIN28AQ9H9Z2 209 aaKnown RBP9.57□□□□□ -0.88
HDAC6-222ENST00000478095 PFDN4Q9NQP4 134 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 PNPOQ9NVS9 261 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 ANKRD10Q9NXR5 420 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 STMN3Q9NZ72 180 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 UTS2RQ9UKP6 389 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 CES1P1Q9UKY3 287 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 RAP2CQ9Y3L5 183 aa9.57□□□□□ -0.88
HDAC6-222ENST00000478095 DYTNA2CJ06 578 aa9.56□□□□□ -0.88
HDAC6-222ENST00000478095 SYNDIG1LA6NDD5 238 aa9.56□□□□□ -0.88
HDAC6-222ENST00000478095 CT62P0C5K7 136 aa9.56□□□□□ -0.88
HDAC6-222ENST00000478095 CPMP14384 443 aa9.56□□□□□ -0.88
HDAC6-222ENST00000478095 NT5EP21589 574 aa9.56□□□□□ -0.88
HDAC6-222ENST00000478095 PRPH2P23942 346 aa9.56□□□□□ -0.88
HDAC6-222ENST00000478095 RPL14P50914 215 aaKnown RBP9.56□□□□□ -0.88
HDAC6-222ENST00000478095 GPR143P51810 404 aa9.56□□□□□ -0.88
HDAC6-222ENST00000478095 ERVK-8P63133 956 aa9.56□□□□□ -0.88
HDAC6-222ENST00000478095 DUSP2Q05923 314 aa9.56□□□□□ -0.88
HDAC6-222ENST00000478095 C2orf80Q0P641 193 aa9.56□□□□□ -0.88
HDAC6-222ENST00000478095 C19orf57Q0VDD7 668 aa9.56□□□□□ -0.88
HDAC6-222ENST00000478095 HEPACAMQ14CZ8 416 aa9.56□□□□□ -0.88
HDAC6-222ENST00000478095 LTB4RQ15722 352 aa9.56□□□□□ -0.88
HDAC6-222ENST00000478095 MEP1AQ16819 746 aa9.56□□□□□ -0.88
HDAC6-222ENST00000478095 H3F3CQ6NXT2 135 aa9.56□□□□□ -0.88
HDAC6-222ENST00000478095 IGFL2Q6UWQ7 119 aa9.56□□□□□ -0.88
HDAC6-222ENST00000478095 C16orf47Q6ZP98 133 aaPredicted RBP9.56□□□□□ -0.88
HDAC6-222ENST00000478095 MORN4Q8NDC4 146 aa9.56□□□□□ -0.88
HDAC6-222ENST00000478095 RIT1Q92963 219 aa9.56□□□□□ -0.88
HDAC6-222ENST00000478095 GFM2Q969S9 779 aaKnown RBP9.56□□□□□ -0.88
HDAC6-222ENST00000478095 EXOSC8Q96B26 276 aaKnown RBP9.56□□□□□ -0.88
HDAC6-222ENST00000478095 TUBGCP3Q96CW5 907 aa9.56□□□□□ -0.88
HDAC6-222ENST00000478095 CNRIP1Q96F85 164 aaPredicted RBP9.56□□□□□ -0.88
HDAC6-222ENST00000478095 SENP5Q96HI0 755 aaPredicted RBP9.56□□□□□ -0.88
HDAC6-222ENST00000478095 EGLN2Q96KS0 407 aa9.56□□□□□ -0.88
HDAC6-222ENST00000478095 ZNF354BQ96LW1 612 aa9.56□□□□□ -0.88
HDAC6-222ENST00000478095 TSSK3Q96PN8 268 aa9.56□□□□□ -0.88
HDAC6-222ENST00000478095 PELOQ9BRX2 385 aaKnown RBP9.56□□□□□ -0.88
HDAC6-222ENST00000478095 C1orf50Q9BV19 199 aa9.56□□□□□ -0.88
HDAC6-222ENST00000478095 MANSC1Q9H8J5 431 aa9.56□□□□□ -0.88
HDAC6-222ENST00000478095 SIRT5Q9NXA8 310 aa9.56□□□□□ -0.88
HDAC6-222ENST00000478095 MARCOQ9UEW3 520 aaPredicted RBP9.56□□□□□ -0.88
HDAC6-222ENST00000478095 BAIAP2L1Q9UHR4 511 aa9.56□□□□□ -0.88
HDAC6-222ENST00000478095 TEKT2Q9UIF3 430 aa9.56□□□□□ -0.88
HDAC6-222ENST00000478095 PPIEQ9UNP9 301 aaKnown RBP9.56□□□□□ -0.88
HDAC6-222ENST00000478095 ERVK-19Q9WJR5 959 aa9.56□□□□□ -0.88
HDAC6-222ENST00000478095 CCDC88CQ9P219 2028 aa9.56□□□□□ -0.88
HDAC6-222ENST00000478095 GABRR3A8MPY1 467 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 NPIPB8E9PQR5 432 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 AKAP10O43572 662 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 DYRK3O43781 588 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 SLC28A2O43868 658 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 SNNO75324 88 aaPredicted RBP9.55□□□□□ -0.88
HDAC6-222ENST00000478095 LRATO95237 230 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 SLC35E2P0CK97 266 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 KITP10721 976 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 DRD2P14416 443 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 PORP16435 677 aaPredicted RBP9.55□□□□□ -0.88
HDAC6-222ENST00000478095 SDC1P18827 310 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 DDCP20711 480 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 SSTR4P31391 388 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 HK2P52789 917 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 PPP2R2AP63151 447 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 PRSS53Q2L4Q9 553 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 PLEKHN1Q494U1 663 aaPredicted RBP9.55□□□□□ -0.88
HDAC6-222ENST00000478095 ATP6AP1LQ52LC2 224 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 ATG16L1Q676U5 607 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 FAM71E1Q6IPT2 247 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 ANKRD26P1Q6NSI1 321 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 IGFL3Q6UXB1 125 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 HSDL2Q6YN16 418 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 RPS19BP1Q86WX3 136 aaKnown RBP9.55□□□□□ -0.88
HDAC6-222ENST00000478095 HPS6Q86YV9 775 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 TICAM1Q8IUC6 712 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 GALNT12Q8IXK2 581 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 C9orf40Q8IXQ3 194 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 LRRC25Q8N386 305 aaPredicted RBP9.55□□□□□ -0.88
HDAC6-222ENST00000478095 Q8NA96 180 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 FNDC5Q8NAU1 212 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 ADCY4Q8NFM4 1077 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 OR1N1Q8NGS0 311 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 FAM76AQ8TAV0 307 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 ZNF721Q8TF20 911 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 PNPLA2Q96AD5 504 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 FBXL20Q96IG2 436 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 FCRL1Q96LA6 429 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 PPP3R2Q96LZ3 170 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 LMF1Q96S06 567 aa9.55□□□□□ -0.88
HDAC6-222ENST00000478095 CCT7Q99832 543 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms