RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 RPTNQ6XPR3 784 aa12.77□□□□□ -0.37
HDAC7-222ENST00000477937 GPRIN3Q6ZVF9 776 aa12.77□□□□□ -0.37
HDAC7-222ENST00000477937 COMMD6Q7Z4G1 85 aa12.77□□□□□ -0.37
HDAC7-222ENST00000477937 MRGPRGQ86SM5 289 aa12.77□□□□□ -0.37
HDAC7-222ENST00000477937 SLC15A4Q8N697 577 aa12.77□□□□□ -0.37
HDAC7-222ENST00000477937 CDYL2Q8N8U2 506 aa12.77□□□□□ -0.37
HDAC7-222ENST00000477937 DOK4Q8TEW6 326 aa12.77□□□□□ -0.37
HDAC7-222ENST00000477937 MZB1Q8WU39 189 aa12.77□□□□□ -0.37
HDAC7-222ENST00000477937 ITLN2Q8WWU7 325 aaPredicted RBP12.77□□□□□ -0.37
HDAC7-222ENST00000477937 TMEM237Q96Q45 408 aa12.77□□□□□ -0.37
HDAC7-222ENST00000477937 ZNF382Q96SR6 550 aa12.77□□□□□ -0.37
HDAC7-222ENST00000477937 FAM173AQ9BQD7 235 aa12.77□□□□□ -0.37
HDAC7-222ENST00000477937 L2HGDHQ9H9P8 463 aa12.77□□□□□ -0.37
HDAC7-222ENST00000477937 PPCSQ9HAB8 311 aa12.77□□□□□ -0.37
HDAC7-222ENST00000477937 SACM1LQ9NTJ5 587 aa12.77□□□□□ -0.37
HDAC7-222ENST00000477937 DEPPQ9NTK1 212 aa12.77□□□□□ -0.37
HDAC7-222ENST00000477937 RYDENQ9NUL5 291 aaKnown RBP12.77□□□□□ -0.37
HDAC7-222ENST00000477937 VPS29Q9UBQ0 182 aa12.77□□□□□ -0.37
HDAC7-222ENST00000477937 STK38LQ9Y2H1 464 aa12.77□□□□□ -0.37
HDAC7-222ENST00000477937 ZNF407Q9C0G0 2248 aa12.77□□□□□ -0.37
HDAC7-222ENST00000477937 NAV2Q8IVL1 2488 aa12.76□□□□□ -0.37
HDAC7-222ENST00000477937 A0A1B0GTH9 108 aa12.76□□□□□ -0.37
HDAC7-222ENST00000477937 A0A1W2PPM1 405 aa12.76□□□□□ -0.37
HDAC7-222ENST00000477937 C1orf226A1L170 272 aa12.76□□□□□ -0.37
HDAC7-222ENST00000477937 OR6C76A6NM76 312 aa12.76□□□□□ -0.37
HDAC7-222ENST00000477937 MANBAO00462 879 aa12.76□□□□□ -0.37
HDAC7-222ENST00000477937 CDC40O60508 579 aaKnown RBP eCLIP12.76□□□□□ -0.37
HDAC7-222ENST00000477937 ZNF354AO60765 605 aaPredicted RBP12.76□□□□□ -0.37
HDAC7-222ENST00000477937 ULK1O75385 1050 aa12.76□□□□□ -0.37
HDAC7-222ENST00000477937 TNFRSF8P28908 595 aa12.76□□□□□ -0.37
HDAC7-222ENST00000477937 HMOX2P30519 316 aa12.76□□□□□ -0.37
HDAC7-222ENST00000477937 PTGER1P34995 402 aa12.76□□□□□ -0.37
HDAC7-222ENST00000477937 DEKP35659 375 aaKnown RBP12.76□□□□□ -0.37
HDAC7-222ENST00000477937 XKP51811 444 aa12.76□□□□□ -0.37
HDAC7-222ENST00000477937 PKNOX1P55347 436 aa12.76□□□□□ -0.37
HDAC7-222ENST00000477937 SLC37A1P57057 533 aa12.76□□□□□ -0.37
HDAC7-222ENST00000477937 GALNT1Q10472 559 aaPredicted RBP12.76□□□□□ -0.37
HDAC7-222ENST00000477937 TBL3Q12788 808 aaKnown RBP12.76□□□□□ -0.37
HDAC7-222ENST00000477937 CSTF3Q12996 717 aaKnown RBP12.76□□□□□ -0.37
HDAC7-222ENST00000477937 ART3Q13508 389 aa12.76□□□□□ -0.37
HDAC7-222ENST00000477937 CMPK2Q5EBM0 449 aa12.76□□□□□ -0.37
HDAC7-222ENST00000477937 C6orf163Q5TEZ5 329 aa12.76□□□□□ -0.37
HDAC7-222ENST00000477937 SLC22A10Q63ZE4 541 aa12.76□□□□□ -0.37
HDAC7-222ENST00000477937 XKRXQ6PP77 449 aa12.76□□□□□ -0.37
HDAC7-222ENST00000477937 PAOXQ6QHF9 649 aa12.76□□□□□ -0.37
HDAC7-222ENST00000477937 RGS9BPQ6ZS82 235 aa12.76□□□□□ -0.37
HDAC7-222ENST00000477937 GK5Q6ZS86 529 aa12.76□□□□□ -0.37
HDAC7-222ENST00000477937 FAM47EQ6ZV65 393 aa12.76□□□□□ -0.37
HDAC7-222ENST00000477937 SLC34A3Q8N130 599 aa12.76□□□□□ -0.37
HDAC7-222ENST00000477937 EID3Q8N140 333 aa12.76□□□□□ -0.37
HDAC7-222ENST00000477937 ZNF808Q8N4W9 903 aaPredicted RBP12.76□□□□□ -0.37
HDAC7-222ENST00000477937 C1orf52Q8N6N3 182 aaKnown RBP12.76□□□□□ -0.37
HDAC7-222ENST00000477937 METTL6Q8TCB7 284 aa12.76□□□□□ -0.37
HDAC7-222ENST00000477937 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.76□□□□□ -0.37
HDAC7-222ENST00000477937 CCDC126Q96EE4 140 aa12.76□□□□□ -0.37
HDAC7-222ENST00000477937 L3HYPDHQ96EM0 354 aa12.76□□□□□ -0.37
HDAC7-222ENST00000477937 GAL3ST4Q96RP7 486 aa12.76□□□□□ -0.37
HDAC7-222ENST00000477937 CXorf21Q9HAI6 301 aa12.76□□□□□ -0.37
HDAC7-222ENST00000477937 PSME2Q9UL46 239 aa12.76□□□□□ -0.37
HDAC7-222ENST00000477937 CCDC151A5D8V7 595 aa12.75□□□□□ -0.37
HDAC7-222ENST00000477937 PINLYPA6NC86 204 aa12.75□□□□□ -0.37
HDAC7-222ENST00000477937 GOLGA6L10A6NI86 522 aa12.75□□□□□ -0.37
HDAC7-222ENST00000477937 PRSS44E7EML9 344 aa12.75□□□□□ -0.37
HDAC7-222ENST00000477937 G3V3Y1 287 aa12.75□□□□□ -0.37
HDAC7-222ENST00000477937 ZNHIT1O43257 154 aa12.75□□□□□ -0.37
HDAC7-222ENST00000477937 GLRA3O75311 464 aa12.75□□□□□ -0.37
HDAC7-222ENST00000477937 SHBGP04278 402 aa12.75□□□□□ -0.37
HDAC7-222ENST00000477937 FREM3P0C091 2139 aa12.75□□□□□ -0.37
HDAC7-222ENST00000477937 MYL2P10916 166 aa12.75□□□□□ -0.37
HDAC7-222ENST00000477937 CPMP14384 443 aa12.75□□□□□ -0.37
HDAC7-222ENST00000477937 PORP16435 677 aaPredicted RBP12.75□□□□□ -0.37
HDAC7-222ENST00000477937 KRT15P19012 456 aa12.75□□□□□ -0.37
HDAC7-222ENST00000477937 SERPINB3P29508 390 aa12.75□□□□□ -0.37
HDAC7-222ENST00000477937 PTGS2P35354 604 aa12.75□□□□□ -0.37
HDAC7-222ENST00000477937 CCT5P48643 541 aa12.75□□□□□ -0.37
HDAC7-222ENST00000477937 SMSP52788 366 aa12.75□□□□□ -0.37
HDAC7-222ENST00000477937 NAA20P61599 178 aa12.75□□□□□ -0.37
HDAC7-222ENST00000477937 PPIAP62937 165 aaKnown RBP12.75□□□□□ -0.37
HDAC7-222ENST00000477937 TRA2BP62995 288 aaKnown RBP12.75□□□□□ -0.37
HDAC7-222ENST00000477937 LCP2Q13094 533 aa12.75□□□□□ -0.37
HDAC7-222ENST00000477937 EBPQ15125 230 aaKnown RBP12.75□□□□□ -0.37
HDAC7-222ENST00000477937 ZNF791Q3KP31 576 aaPredicted RBP12.75□□□□□ -0.37
HDAC7-222ENST00000477937 HLA-DQA1Q5Y7H0 255 aa12.75□□□□□ -0.37
HDAC7-222ENST00000477937 SP5Q6BEB4 398 aaPredicted RBP12.75□□□□□ -0.37
HDAC7-222ENST00000477937 SLC48A1Q6P1K1 146 aa12.75□□□□□ -0.37
HDAC7-222ENST00000477937 SLC22A16Q86VW1 577 aa12.75□□□□□ -0.37
HDAC7-222ENST00000477937 DOLPP1Q86YN1 238 aa12.75□□□□□ -0.37
HDAC7-222ENST00000477937 CHERPQ8IWX8 916 aaKnown RBP12.75□□□□□ -0.37
HDAC7-222ENST00000477937 GALNT12Q8IXK2 581 aa12.75□□□□□ -0.37
HDAC7-222ENST00000477937 DND1Q8IYX4 353 aaKnown RBP12.75□□□□□ -0.37
HDAC7-222ENST00000477937 GBP7Q8N8V2 638 aaPredicted RBP12.75□□□□□ -0.37
HDAC7-222ENST00000477937 OR52N2Q8NGI0 321 aa12.75□□□□□ -0.37
HDAC7-222ENST00000477937 AGAP11Q8TF27 550 aa12.75□□□□□ -0.37
HDAC7-222ENST00000477937 CHTF18Q8WVB6 975 aa12.75□□□□□ -0.37
HDAC7-222ENST00000477937 SPACA9Q96E40 222 aaPredicted RBP12.75□□□□□ -0.37
HDAC7-222ENST00000477937 HBEGFQ99075 208 aa12.75□□□□□ -0.37
HDAC7-222ENST00000477937 WWTR1Q9GZV5 400 aa12.75□□□□□ -0.37
HDAC7-222ENST00000477937 DEFB127Q9H1M4 99 aa12.75□□□□□ -0.37
HDAC7-222ENST00000477937 GRID1Q9ULK0 1009 aa12.75□□□□□ -0.37
HDAC7-222ENST00000477937 MEMO1Q9Y316 297 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms