RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 SLAMF1Q13291 335 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 DOC2AQ14183 400 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 TGFBIQ15582 683 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 PDK4Q16654 411 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 FBXL19-AS1Q494R0 122 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 MSS51Q4VC12 460 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 EIPR1Q53HC9 387 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 TBCELQ5QJ74 424 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 RNASEH2BQ5TBB1 312 aaKnown RBP6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 C6orf163Q5TEZ5 329 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 NSUN5P2Q63ZY6 315 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 TRMT10BQ6PF06 316 aaKnown RBP6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 ADGRD1Q6QNK2 874 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 ZNF793Q6ZN11 406 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 DGAT2L6Q6ZPD8 337 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 CAPN12Q6ZSI9 719 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 VN1R5Q7Z5H4 357 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 YTHDF3Q7Z739 585 aaKnown RBP6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 PACS2Q86VP3 889 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 PRIMA1Q86XR5 153 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 GPSM1Q86YR5 675 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 ANKMY2Q8IV38 441 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 IGDCC3Q8IVU1 814 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 CNTN4Q8IWV2 1026 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 DND1Q8IYX4 353 aaKnown RBP6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 TAGAPQ8N103 731 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 CIARTQ8N365 385 aaPredicted RBP6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 TCAIMQ8N3R3 496 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 SPATA6LQ8N4H0 392 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 SLC15A4Q8N697 577 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 SRFBP1Q8NEF9 429 aaKnown RBP6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 RDH11Q8TC12 318 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 ANKRD9Q96BM1 317 aaPredicted RBP6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 RHBDF1Q96CC6 855 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 ARSGQ96EG1 525 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 PDLIM5Q96HC4 596 aaKnown RBP6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 FBXL20Q96IG2 436 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 VPS39Q96JC1 886 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 GNRHR2Q96P88 292 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 NAP1L3Q99457 506 aaPredicted RBP6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 CCL19Q99731 98 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 WDR83Q9BRX9 315 aaKnown RBP6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 TMEM79Q9BSE2 394 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 NAT9Q9BTE0 207 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 TBCDQ9BTW9 1192 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 EFCAB11Q9BUY7 163 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 CAPS2Q9BXY5 557 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 UGT2B28Q9BY64 529 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 WWTR1Q9GZV5 400 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 RPF2Q9H7B2 306 aaKnown RBP6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 PRDM7Q9NQW5 492 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 TEX10Q9NXF1 929 aaPredicted RBP6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 GALNT8Q9NY28 637 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 GPRC5BQ9NZH0 403 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 C6orf203Q9P0P8 240 aaPredicted RBP6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 PCDHGB3Q9Y5G1 929 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 CHCHD2Q9Y6H1 151 aaPredicted RBP6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 JMJD1CQ15652 2540 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 UQCRHLA0A096LP55 91 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 C2orf92A0A1B0GVN3 265 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 TRIM64A6NGJ6 449 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 TRIM64BA6NI03 449 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 GLOD5A6NK44 160 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 DNALI1O14645 258 aaPredicted RBP6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 TAPBPO15533 448 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 STK16O75716 305 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 SMNDC1O75940 238 aaKnown RBP eCLIP6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 TBX6O95947 436 aaPredicted RBP6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 C1QAP02745 245 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 FBXO45P0C2W1 286 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 ALOX15P16050 662 aaPredicted RBP6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 BMP7P18075 431 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 HIST1H1TP22492 207 aaPredicted RBP6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 TCEA1P23193 301 aaKnown RBP6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 ARL1P40616 181 aaPredicted RBP6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 BUD31P41223 144 aaPredicted RBP6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 TMED10P49755 219 aaKnown RBP6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 CDK9P50750 372 aaKnown RBP6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 NRG3P56975 720 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 TAS2R39P59534 338 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 RPP38P78345 283 aaKnown RBP6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 TNFRSF17Q02223 184 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 FOXF2Q12947 444 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 CBLBQ13191 982 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 LAPTM5Q13571 262 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 SETDB1Q15047 1291 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 RPS6KA2Q15349 733 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 NNATQ16517 81 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 ADPRMQ3LIE5 342 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 DCST1Q5T197 706 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 C18orf63Q68DL7 685 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 POMZP3Q6PJE2 187 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 CYP20A1Q6UW02 462 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 PLXDC2Q6UX71 529 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 ANGPTL8Q6UXH0 198 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 SYDE1Q6ZW31 735 aaPredicted RBP6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 GALNT7Q86SF2 657 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 YRDCQ86U90 279 aaKnown RBP6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 GPR180Q86V85 440 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 KRTAP1-3Q8IUG1 177 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms