RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 SYT5O00445 386 aa14.39□□□□□ -0.11
SRRT-209ENST00000474896 TGFB1P01137 390 aa14.39□□□□□ -0.11
SRRT-209ENST00000474896 CCDC166P0CW27 439 aa14.39□□□□□ -0.11
SRRT-209ENST00000474896 COX7A2P14406 83 aa14.39□□□□□ -0.11
SRRT-209ENST00000474896 STMN1P16949 149 aa14.39□□□□□ -0.11
SRRT-209ENST00000474896 CPN2P22792 545 aa14.39□□□□□ -0.11
SRRT-209ENST00000474896 CNTFP26441 200 aa14.39□□□□□ -0.11
SRRT-209ENST00000474896 UQCRC1P31930 480 aa14.39□□□□□ -0.11
SRRT-209ENST00000474896 IFFO1Q0D2I5 559 aa14.39□□□□□ -0.11
SRRT-209ENST00000474896 CHIT1Q13231 466 aa14.39□□□□□ -0.11
SRRT-209ENST00000474896 LAPTM5Q13571 262 aa14.39□□□□□ -0.11
SRRT-209ENST00000474896 PDK4Q16654 411 aa14.39□□□□□ -0.11
SRRT-209ENST00000474896 AP5B1Q2VPB7 878 aa14.39□□□□□ -0.11
SRRT-209ENST00000474896 PRAMEF20Q5VT98 475 aa14.39□□□□□ -0.11
SRRT-209ENST00000474896 TDRPQ86YL5 185 aa14.39□□□□□ -0.11
SRRT-209ENST00000474896 NUBPLQ8TB37 319 aa14.39□□□□□ -0.11
SRRT-209ENST00000474896 SLC22A8Q8TCC7 542 aa14.39□□□□□ -0.11
SRRT-209ENST00000474896 EPS8L3Q8TE67 593 aaKnown RBP14.39□□□□□ -0.11
SRRT-209ENST00000474896 PPWD1Q96BP3 646 aaKnown RBP14.39□□□□□ -0.11
SRRT-209ENST00000474896 RBM18Q96H35 190 aaKnown RBP14.39□□□□□ -0.11
SRRT-209ENST00000474896 DGAT2Q96PD7 388 aa14.39□□□□□ -0.11
SRRT-209ENST00000474896 CLEC4MQ9H2X3 399 aaPredicted RBP14.39□□□□□ -0.11
SRRT-209ENST00000474896 ZFP64Q9NPA5 681 aa14.39□□□□□ -0.11
SRRT-209ENST00000474896 RASSF1Q9NS23 344 aa14.39□□□□□ -0.11
SRRT-209ENST00000474896 CD274Q9NZQ7 290 aa14.39□□□□□ -0.11
SRRT-209ENST00000474896 CRIM1Q9NZV1 1036 aa14.39□□□□□ -0.11
SRRT-209ENST00000474896 PTBP2Q9UKA9 531 aaKnown RBP14.39□□□□□ -0.11
SRRT-209ENST00000474896 PLEKHA6Q9Y2H5 1048 aa14.39□□□□□ -0.11
SRRT-209ENST00000474896 ARHGAP21Q5T5U3 1957 aa14.38□□□□□ -0.11
SRRT-209ENST00000474896 SMIM23A6NLE4 172 aa14.38□□□□□ -0.11
SRRT-209ENST00000474896 HSPB2A8KAH6 182 aa14.38□□□□□ -0.11
SRRT-209ENST00000474896 SAP18O00422 153 aaKnown RBP14.38□□□□□ -0.11
SRRT-209ENST00000474896 PHGDHO43175 533 aaKnown RBP14.38□□□□□ -0.11
SRRT-209ENST00000474896 FGF17O60258 216 aa14.38□□□□□ -0.11
SRRT-209ENST00000474896 CCNT2O60583 730 aaKnown RBP14.38□□□□□ -0.11
SRRT-209ENST00000474896 WISP3O95389 354 aaPredicted RBP14.38□□□□□ -0.11
SRRT-209ENST00000474896 SNRPAP09012 282 aaKnown RBP14.38□□□□□ -0.11
SRRT-209ENST00000474896 HIST1H1TP22492 207 aaPredicted RBP14.38□□□□□ -0.11
SRRT-209ENST00000474896 DNASE1P24855 282 aa14.38□□□□□ -0.11
SRRT-209ENST00000474896 SLCO1A2P46721 670 aa14.38□□□□□ -0.11
SRRT-209ENST00000474896 STT3AP46977 705 aa14.38□□□□□ -0.11
SRRT-209ENST00000474896 RAB10P61026 200 aa14.38□□□□□ -0.11
SRRT-209ENST00000474896 KCNJ2P63252 427 aa14.38□□□□□ -0.11
SRRT-209ENST00000474896 IRF8Q02556 426 aa14.38□□□□□ -0.11
SRRT-209ENST00000474896 RASA2Q15283 850 aa14.38□□□□□ -0.11
SRRT-209ENST00000474896 OR4D1Q15615 310 aa14.38□□□□□ -0.11
SRRT-209ENST00000474896 HSPB2Q16082 182 aa14.38□□□□□ -0.11
SRRT-209ENST00000474896 PAGE2BQ5JRK9 111 aa14.38□□□□□ -0.11
SRRT-209ENST00000474896 CDKL4Q5MAI5 379 aa14.38□□□□□ -0.11
SRRT-209ENST00000474896 LGSNQ5TDP6 509 aa14.38□□□□□ -0.11
SRRT-209ENST00000474896 LYPD8Q6UX82 237 aa14.38□□□□□ -0.11
SRRT-209ENST00000474896 SEM1Q6ZVN7 128 aa14.38□□□□□ -0.11
SRRT-209ENST00000474896 CHSY3Q70JA7 882 aa14.38□□□□□ -0.11
SRRT-209ENST00000474896 CMC1Q7Z7K0 106 aa14.38□□□□□ -0.11
SRRT-209ENST00000474896 C9orf40Q8IXQ3 194 aa14.38□□□□□ -0.11
SRRT-209ENST00000474896 SLC15A4Q8N697 577 aa14.38□□□□□ -0.11
SRRT-209ENST00000474896 C7orf57Q8NEG2 295 aa14.38□□□□□ -0.11
SRRT-209ENST00000474896 GOT1L1Q8NHS2 421 aaPredicted RBP14.38□□□□□ -0.11
SRRT-209ENST00000474896 DOK4Q8TEW6 326 aa14.38□□□□□ -0.11
SRRT-209ENST00000474896 PAQR8Q8TEZ7 354 aa14.38□□□□□ -0.11
SRRT-209ENST00000474896 ZNF473Q8WTR7 871 aaKnown RBP14.38□□□□□ -0.11
SRRT-209ENST00000474896 SPACA9Q96E40 222 aaPredicted RBP14.38□□□□□ -0.11
SRRT-209ENST00000474896 RMND5BQ96G75 393 aaPredicted RBP14.38□□□□□ -0.11
SRRT-209ENST00000474896 JSRP1Q96MG2 331 aaPredicted RBP14.38□□□□□ -0.11
SRRT-209ENST00000474896 MS4A8Q9BY19 250 aa14.38□□□□□ -0.11
SRRT-209ENST00000474896 PROK2Q9HC23 129 aa14.38□□□□□ -0.11
SRRT-209ENST00000474896 ACKR4Q9NPB9 350 aa14.38□□□□□ -0.11
SRRT-209ENST00000474896 SNX15Q9NRS6 342 aa14.38□□□□□ -0.11
SRRT-209ENST00000474896 B4GALT7Q9UBV7 327 aa14.38□□□□□ -0.11
SRRT-209ENST00000474896 BOKQ9UMX3 212 aaPredicted RBP14.38□□□□□ -0.11
SRRT-209ENST00000474896 EDARQ9UNE0 448 aa14.38□□□□□ -0.11
SRRT-209ENST00000474896 NCKAP5O14513 1909 aa14.38□□□□□ -0.11
SRRT-209ENST00000474896 MPDZO75970 2070 aa14.38□□□□□ -0.11
SRRT-209ENST00000474896 ZNF469Q96JG9 3925 aaPredicted RBP14.38□□□□□ -0.11
SRRT-209ENST00000474896 FREM3P0C091 2139 aa14.38□□□□□ -0.11
SRRT-209ENST00000474896 MAP1AP78559 2803 aaPredicted RBP14.37□□□□□ -0.11
SRRT-209ENST00000474896 IQANK1A0A1B0GTG1 560 aa14.37□□□□□ -0.11
SRRT-209ENST00000474896 TRIM49D1C9J1S8 452 aa14.37□□□□□ -0.11
SRRT-209ENST00000474896 HRKO00198 91 aa14.37□□□□□ -0.11
SRRT-209ENST00000474896 PROM1O43490 865 aa14.37□□□□□ -0.11
SRRT-209ENST00000474896 CDH16O75309 829 aa14.37□□□□□ -0.11
SRRT-209ENST00000474896 ALDOAP04075 364 aaKnown RBP14.37□□□□□ -0.11
SRRT-209ENST00000474896 IGKV3-11P04433 115 aa14.37□□□□□ -0.11
SRRT-209ENST00000474896 PCNAP12004 261 aa14.37□□□□□ -0.11
SRRT-209ENST00000474896 CD1DP15813 335 aa14.37□□□□□ -0.11
SRRT-209ENST00000474896 EPORP19235 508 aa14.37□□□□□ -0.11
SRRT-209ENST00000474896 CRABP2P29373 138 aa14.37□□□□□ -0.11
SRRT-209ENST00000474896 PEX19P40855 299 aa14.37□□□□□ -0.11
SRRT-209ENST00000474896 TRPC1P48995 793 aa14.37□□□□□ -0.11
SRRT-209ENST00000474896 SERPINB8P50452 374 aa14.37□□□□□ -0.11
SRRT-209ENST00000474896 TBL3Q12788 808 aaKnown RBP14.37□□□□□ -0.11
SRRT-209ENST00000474896 SLAMF1Q13291 335 aa14.37□□□□□ -0.11
SRRT-209ENST00000474896 TBCCQ15814 346 aa14.37□□□□□ -0.11
SRRT-209ENST00000474896 TMEM35AQ53FP2 167 aa14.37□□□□□ -0.11
SRRT-209ENST00000474896 DGAT2L6Q6ZPD8 337 aa14.37□□□□□ -0.11
SRRT-209ENST00000474896 RAPH1Q70E73 1250 aa14.37□□□□□ -0.11
SRRT-209ENST00000474896 CDC20BQ86Y33 519 aa14.37□□□□□ -0.11
SRRT-209ENST00000474896 ULK2Q8IYT8 1036 aa14.37□□□□□ -0.11
SRRT-209ENST00000474896 FAM13CQ8NE31 585 aa14.37□□□□□ -0.11
SRRT-209ENST00000474896 NEIL3Q8TAT5 605 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms