RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 TMEM8BA6NDV4 472 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 ZNF233A6NK53 670 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 TMEM110-MUSTN1A8MSY1 372 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 HAS3O00219 553 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 PGRMC1O00264 195 aaKnown RBP1.33□□□□□ -2.2
CCDC39-203ENST00000473854 TFECO14948 347 aaPredicted RBP1.33□□□□□ -2.2
CCDC39-203ENST00000473854 OGTO15294 1046 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 TTI1O43156 1089 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 HCRTR2O43614 444 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 SH3BP5O60239 455 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 DKC1O60832 514 aaKnown RBP eCLIP1.33□□□□□ -2.2
CCDC39-203ENST00000473854 RTN2O75298 545 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 PTP4A3O75365 173 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 NDUFS3O75489 264 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 TOM1L1O75674 476 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 GH1P01241 217 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 FGGP02679 453 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 EIF2S1P05198 315 aaKnown RBP1.33□□□□□ -2.2
CCDC39-203ENST00000473854 H2AFZP0C0S5 128 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 STAG3L1P0CL83 205 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 HSPA1AP0DMV8 641 aaKnown RBP1.33□□□□□ -2.2
CCDC39-203ENST00000473854 HSPA1BP0DMV9 641 aaKnown RBP1.33□□□□□ -2.2
CCDC39-203ENST00000473854 SMIM10L2AP0DMW4 78 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 SMIM10L2BP0DMW5 78 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 CYBAP13498 195 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 KRT13P13646 458 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 TCP1P17987 556 aaKnown RBP1.33□□□□□ -2.2
CCDC39-203ENST00000473854 ARF4P18085 180 aaPredicted RBP1.33□□□□□ -2.2
CCDC39-203ENST00000473854 CAPN3P20807 821 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 CA4P22748 312 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 CHMP24386 653 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 CTNNA2P26232 953 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 OXTRP30559 389 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 GTF2H1P32780 548 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 CDH5P33151 784 aaPredicted RBP1.33□□□□□ -2.2
CCDC39-203ENST00000473854 CTNNA1P35221 906 aaKnown RBP1.33□□□□□ -2.2
CCDC39-203ENST00000473854 MATR3P43243 847 aaKnown RBP eCLIP1.33□□□□□ -2.2
CCDC39-203ENST00000473854 TSFMP43897 325 aaKnown RBP1.33□□□□□ -2.2
CCDC39-203ENST00000473854 HADHBP55084 474 aaKnown RBP1.33□□□□□ -2.2
CCDC39-203ENST00000473854 PTENP60484 403 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 MYL6P60660 151 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 OSTNP61366 133 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 DCAF7P61962 342 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 FKBP1BP68106 108 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 KRT83P78385 493 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 BEX3Q00994 111 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 GCNT1Q02742 428 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 SLC25A11Q02978 314 aaKnown RBP1.33□□□□□ -2.2
CCDC39-203ENST00000473854 ENPEPQ07075 957 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 MGAT3Q09327 533 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 SMC1AQ14683 1233 aaKnown RBP1.33□□□□□ -2.2
CCDC39-203ENST00000473854 RPS6KA1Q15418 735 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 SPA17Q15506 151 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 ZNF699Q32M78 642 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 DUSP28Q4G0W2 176 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 SOWAHCQ53LP3 525 aaPredicted RBP1.33□□□□□ -2.2
CCDC39-203ENST00000473854 GLRA4Q5JXX5 417 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 GCNT6Q5T4J0 391 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 ATF7IP2Q5U623 682 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 TMEM198Q66K66 360 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 KRT39Q6A163 491 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 TXNRD3NBQ6F5E7 133 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 FAAH2Q6GMR7 532 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 JADE1Q6IE81 842 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 C8orf74Q6P047 294 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 NCEH1Q6PIU2 408 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 TMEM270Q6UE05 265 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 TMCO3Q6UWJ1 677 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 CYP4V2Q6ZWL3 525 aaPredicted RBP1.33□□□□□ -2.2
CCDC39-203ENST00000473854 IKBIPQ70UQ0 350 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 H2AFVQ71UI9 128 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 OTUD6AQ7L8S5 288 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 PLPPR4Q7Z2D5 763 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 PRUNE1Q86TP1 453 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 TLK2Q86UE8 772 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 VASH2Q86V25 355 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 FAM228AQ86W67 206 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 GALNT13Q8IUC8 556 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 WDR49Q8IV35 697 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 ZBTB8OSQ8IWT0 167 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 PHC2Q8IXK0 858 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 KLHL7Q8IXQ5 586 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 THNSL1Q8IYQ7 743 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 MCOLN2Q8IZK6 566 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 MMGT1Q8N4V1 131 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 WDTC1Q8N5D0 677 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 RNF10Q8N5U6 811 aaKnown RBP1.33□□□□□ -2.2
CCDC39-203ENST00000473854 FRMD1Q8N878 549 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 MAPKAPK5-AS1Q8N8E1 139 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 PRELID2Q8N945 189 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 AQP11Q8NBQ7 271 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 SLC4A11Q8NBS3 891 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 RNF149Q8NC42 400 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 HJURPQ8NCD3 748 aaPredicted RBP1.33□□□□□ -2.2
CCDC39-203ENST00000473854 FBXL13Q8NEE6 735 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 GPRC5AQ8NFJ5 357 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 OR6S1Q8NH40 331 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 PPTC7Q8NI37 304 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 JOSD2Q8TAC2 188 aa1.33□□□□□ -2.2
CCDC39-203ENST00000473854 MAPK15Q8TD08 544 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms