RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 GHDCQ8N2G8 530 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 METTL4Q8N3J2 472 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 C1orf52Q8N6N3 182 aaKnown RBP10.7□□□□□ -0.7
CPNE1-222ENST00000473373 POGLUT1Q8NBL1 392 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 PSD4Q8NDX1 1056 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 FAM13CQ8NE31 585 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 KLHL29Q96CT2 875 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 SENP5Q96HI0 755 aaPredicted RBP10.7□□□□□ -0.7
CPNE1-222ENST00000473373 FRMD6Q96NE9 622 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 RASL10BQ96S79 203 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 BARD1Q99728 777 aaKnown RBP10.7□□□□□ -0.7
CPNE1-222ENST00000473373 C1QTNF3Q9BXJ4 246 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 EPB41L4BQ9H329 900 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 EXO5Q9H790 373 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 GIMAP4Q9NUV9 329 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 TEX10Q9NXF1 929 aaPredicted RBP10.7□□□□□ -0.7
CPNE1-222ENST00000473373 VPS29Q9UBQ0 182 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 ZNF223Q9UK11 482 aaPredicted RBP10.7□□□□□ -0.7
CPNE1-222ENST00000473373 PPT2Q9UMR5 302 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 FIS1Q9Y3D6 152 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 ASB4Q9Y574 426 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 ZNF780BQ9Y6R6 833 aa10.7□□□□□ -0.7
CPNE1-222ENST00000473373 C1orf226A1L170 272 aa10.69□□□□□ -0.7
CPNE1-222ENST00000473373 G3V3Y1 287 aa10.69□□□□□ -0.7
CPNE1-222ENST00000473373 SLC19A2O60779 497 aa10.69□□□□□ -0.7
CPNE1-222ENST00000473373 OR6B1O95007 311 aa10.69□□□□□ -0.7
CPNE1-222ENST00000473373 HSD3B1P14060 373 aa10.69□□□□□ -0.7
CPNE1-222ENST00000473373 HSD3B2P26439 372 aa10.69□□□□□ -0.7
CPNE1-222ENST00000473373 TRHRP34981 398 aaPredicted RBP10.69□□□□□ -0.7
CPNE1-222ENST00000473373 XKP51811 444 aa10.69□□□□□ -0.7
CPNE1-222ENST00000473373 NAA20P61599 178 aa10.69□□□□□ -0.7
CPNE1-222ENST00000473373 VSNL1P62760 191 aa10.69□□□□□ -0.7
CPNE1-222ENST00000473373 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.69□□□□□ -0.7
CPNE1-222ENST00000473373 ZNF750Q32MQ0 723 aa10.69□□□□□ -0.7
CPNE1-222ENST00000473373 SPIN4Q56A73 249 aa10.69□□□□□ -0.7
CPNE1-222ENST00000473373 MRM1Q6IN84 353 aaKnown RBP10.69□□□□□ -0.7
CPNE1-222ENST00000473373 PAOXQ6QHF9 649 aa10.69□□□□□ -0.7
CPNE1-222ENST00000473373 SCIMPQ6UWF3 145 aa10.69□□□□□ -0.7
CPNE1-222ENST00000473373 RTL4Q6ZR62 310 aa10.69□□□□□ -0.7
CPNE1-222ENST00000473373 GK5Q6ZS86 529 aa10.69□□□□□ -0.7
CPNE1-222ENST00000473373 TDRPQ86YL5 185 aa10.69□□□□□ -0.7
CPNE1-222ENST00000473373 SULF2Q8IWU5 870 aa10.69□□□□□ -0.7
CPNE1-222ENST00000473373 GALNT12Q8IXK2 581 aa10.69□□□□□ -0.7
CPNE1-222ENST00000473373 TAGAPQ8N103 731 aa10.69□□□□□ -0.7
CPNE1-222ENST00000473373 RIBC1Q8N443 379 aaPredicted RBP10.69□□□□□ -0.7
CPNE1-222ENST00000473373 OR8K3Q8NH51 312 aa10.69□□□□□ -0.7
CPNE1-222ENST00000473373 OR2W6PQ8NHA6 318 aa10.69□□□□□ -0.7
CPNE1-222ENST00000473373 RDH11Q8TC12 318 aa10.69□□□□□ -0.7
CPNE1-222ENST00000473373 ZNF721Q8TF20 911 aa10.69□□□□□ -0.7
CPNE1-222ENST00000473373 L3HYPDHQ96EM0 354 aa10.69□□□□□ -0.7
CPNE1-222ENST00000473373 FBXL20Q96IG2 436 aa10.69□□□□□ -0.7
CPNE1-222ENST00000473373 GPR137Q96N19 417 aa10.69□□□□□ -0.7
CPNE1-222ENST00000473373 ZNF717Q9BY31 904 aaPredicted RBP10.69□□□□□ -0.7
CPNE1-222ENST00000473373 SHCBP1LQ9BZQ2 653 aa10.69□□□□□ -0.7
CPNE1-222ENST00000473373 ANKZF1Q9H8Y5 726 aa10.69□□□□□ -0.7
CPNE1-222ENST00000473373 SACM1LQ9NTJ5 587 aa10.69□□□□□ -0.7
CPNE1-222ENST00000473373 SENP1Q9P0U3 644 aa10.69□□□□□ -0.7
CPNE1-222ENST00000473373 BCAP29Q9UHQ4 241 aa10.69□□□□□ -0.7
CPNE1-222ENST00000473373 PPIEQ9UNP9 301 aaKnown RBP10.69□□□□□ -0.7
CPNE1-222ENST00000473373 TIMM22Q9Y584 194 aa10.69□□□□□ -0.7
CPNE1-222ENST00000473373 CLDN16Q9Y5I7 305 aa10.69□□□□□ -0.7
CPNE1-222ENST00000473373 ZNF407Q9C0G0 2248 aa10.69□□□□□ -0.7
CPNE1-222ENST00000473373 A0A1B0GTL3 188 aa10.68□□□□□ -0.7
CPNE1-222ENST00000473373 C2orf92A0A1B0GVN3 265 aa10.68□□□□□ -0.7
CPNE1-222ENST00000473373 WASHC1A8K0Z3 465 aa10.68□□□□□ -0.7
CPNE1-222ENST00000473373 CAPN14A8MX76 684 aa10.68□□□□□ -0.7
CPNE1-222ENST00000473373 PRRG2O14669 202 aa10.68□□□□□ -0.7
CPNE1-222ENST00000473373 PGRMC2O15173 223 aa10.68□□□□□ -0.7
CPNE1-222ENST00000473373 ASNA1O43681 348 aa10.68□□□□□ -0.7
CPNE1-222ENST00000473373 HS6ST1O60243 411 aa10.68□□□□□ -0.7
CPNE1-222ENST00000473373 PCDH7O60245 1069 aa10.68□□□□□ -0.7
CPNE1-222ENST00000473373 ZG16O60844 167 aa10.68□□□□□ -0.7
CPNE1-222ENST00000473373 CLDN1O95832 211 aa10.68□□□□□ -0.7
CPNE1-222ENST00000473373 CHEK2O96017 543 aa10.68□□□□□ -0.7
CPNE1-222ENST00000473373 LDLRP01130 860 aa10.68□□□□□ -0.7
CPNE1-222ENST00000473373 PROCP04070 461 aa10.68□□□□□ -0.7
CPNE1-222ENST00000473373 SLC35E2P0CK97 266 aa10.68□□□□□ -0.7
CPNE1-222ENST00000473373 CPMP14384 443 aa10.68□□□□□ -0.7
CPNE1-222ENST00000473373 CPA3P15088 417 aa10.68□□□□□ -0.7
CPNE1-222ENST00000473373 PORP16435 677 aaPredicted RBP10.68□□□□□ -0.7
CPNE1-222ENST00000473373 CRHR1P34998 444 aa10.68□□□□□ -0.7
CPNE1-222ENST00000473373 FEN1P39748 380 aaKnown RBP10.68□□□□□ -0.7
CPNE1-222ENST00000473373 DCTP40126 519 aa10.68□□□□□ -0.7
CPNE1-222ENST00000473373 NAGLUP54802 743 aa10.68□□□□□ -0.7
CPNE1-222ENST00000473373 NRG3P56975 720 aa10.68□□□□□ -0.7
CPNE1-222ENST00000473373 IGLV3-21P80748 117 aaPredicted RBP10.68□□□□□ -0.7
CPNE1-222ENST00000473373 ZNF324BQ6AW86 544 aaPredicted RBP10.68□□□□□ -0.7
CPNE1-222ENST00000473373 MTFR2Q6P444 385 aa10.68□□□□□ -0.7
CPNE1-222ENST00000473373 MAMDC2Q7Z304 686 aaPredicted RBP10.68□□□□□ -0.7
CPNE1-222ENST00000473373 MDGA2Q7Z553 956 aa10.68□□□□□ -0.7
CPNE1-222ENST00000473373 SRRM1Q8IYB3 904 aaKnown RBP10.68□□□□□ -0.7
CPNE1-222ENST00000473373 EID3Q8N140 333 aa10.68□□□□□ -0.7
CPNE1-222ENST00000473373 TMEM151AQ8N4L1 468 aa10.68□□□□□ -0.7
CPNE1-222ENST00000473373 GBP7Q8N8V2 638 aaPredicted RBP10.68□□□□□ -0.7
CPNE1-222ENST00000473373 OR5M3Q8NGP4 307 aa10.68□□□□□ -0.7
CPNE1-222ENST00000473373 NUBPLQ8TB37 319 aa10.68□□□□□ -0.7
CPNE1-222ENST00000473373 JSRP1Q96MG2 331 aaPredicted RBP10.68□□□□□ -0.7
CPNE1-222ENST00000473373 KCNA7Q96RP8 456 aa10.68□□□□□ -0.7
CPNE1-222ENST00000473373 SMC6Q96SB8 1091 aa10.68□□□□□ -0.7
CPNE1-222ENST00000473373 EBPLQ9BY08 206 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms