RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 ARL14EPQ8N8R7 260 aaPredicted RBP9.62□□□□□ -0.87
APTX-216ENST00000472896 OR4F6Q8NGB9 312 aa9.62□□□□□ -0.87
APTX-216ENST00000472896 NDRG1Q92597 394 aaKnown RBP9.62□□□□□ -0.87
APTX-216ENST00000472896 MRPS31Q92665 395 aaKnown RBP9.62□□□□□ -0.87
APTX-216ENST00000472896 PTP4A1Q93096 173 aa9.62□□□□□ -0.87
APTX-216ENST00000472896 OPALINQ96PE5 141 aa9.62□□□□□ -0.87
APTX-216ENST00000472896 OR52E6Q96RD3 313 aa9.62□□□□□ -0.87
APTX-216ENST00000472896 PELOQ9BRX2 385 aaKnown RBP9.62□□□□□ -0.87
APTX-216ENST00000472896 MIXL1Q9H2W2 232 aa9.62□□□□□ -0.87
APTX-216ENST00000472896 ANKRA2Q9H9E1 313 aa9.62□□□□□ -0.87
APTX-216ENST00000472896 EXOSC4Q9NPD3 245 aaKnown RBP9.62□□□□□ -0.87
APTX-216ENST00000472896 SNTG1Q9NSN8 517 aa9.62□□□□□ -0.87
APTX-216ENST00000472896 DDIT4Q9NX09 232 aa9.62□□□□□ -0.87
APTX-216ENST00000472896 LYARQ9NX58 379 aaKnown RBP9.62□□□□□ -0.87
APTX-216ENST00000472896 NUDT4Q9NZJ9 180 aa9.62□□□□□ -0.87
APTX-216ENST00000472896 MARCH4Q9P2E8 410 aaPredicted RBP9.62□□□□□ -0.87
APTX-216ENST00000472896 VPS9D1Q9Y2B5 631 aa9.62□□□□□ -0.87
APTX-216ENST00000472896 KLF2Q9Y5W3 355 aaPredicted RBP9.62□□□□□ -0.87
APTX-216ENST00000472896 SESN1Q9Y6P5 492 aa9.62□□□□□ -0.87
APTX-216ENST00000472896 OBSL1O75147 1896 aa9.62□□□□□ -0.87
APTX-216ENST00000472896 I6L893 689 aaPredicted RBP9.61□□□□□ -0.87
APTX-216ENST00000472896 SGK494L7N484 410 aa9.61□□□□□ -0.87
APTX-216ENST00000472896 LYRM1O43325 122 aa9.61□□□□□ -0.87
APTX-216ENST00000472896 KLF8O95600 359 aaPredicted RBP9.61□□□□□ -0.87
APTX-216ENST00000472896 CFIP05156 583 aa9.61□□□□□ -0.87
APTX-216ENST00000472896 HOXB9P17482 250 aaPredicted RBP9.61□□□□□ -0.87
APTX-216ENST00000472896 PNPLA4P41247 253 aa9.61□□□□□ -0.87
APTX-216ENST00000472896 CRYBB2P43320 205 aa9.61□□□□□ -0.87
APTX-216ENST00000472896 DAOAP59103 153 aa9.61□□□□□ -0.87
APTX-216ENST00000472896 ABATP80404 500 aa9.61□□□□□ -0.87
APTX-216ENST00000472896 PLIN5Q00G26 463 aa9.61□□□□□ -0.87
APTX-216ENST00000472896 HSF2Q03933 536 aa9.61□□□□□ -0.87
APTX-216ENST00000472896 SCRN3Q0VDG4 424 aa9.61□□□□□ -0.87
APTX-216ENST00000472896 DBPQ10586 325 aaPredicted RBP9.61□□□□□ -0.87
APTX-216ENST00000472896 ZNF273Q14593 569 aa9.61□□□□□ -0.87
APTX-216ENST00000472896 LAPTM4AQ15012 233 aa9.61□□□□□ -0.87
APTX-216ENST00000472896 PCBP2Q15366 365 aaKnown RBP eCLIP9.61□□□□□ -0.87
APTX-216ENST00000472896 RFTN2Q52LD8 501 aaPredicted RBP9.61□□□□□ -0.87
APTX-216ENST00000472896 PLAG1Q6DJT9 500 aa9.61□□□□□ -0.87
APTX-216ENST00000472896 KIAA1324Q6UXG2 1013 aaKnown RBP9.61□□□□□ -0.87
APTX-216ENST00000472896 LUZP2Q86TE4 346 aa9.61□□□□□ -0.87
APTX-216ENST00000472896 PHACTR4Q8IZ21 702 aa9.61□□□□□ -0.87
APTX-216ENST00000472896 LINC00469Q8N7U9 141 aa9.61□□□□□ -0.87
APTX-216ENST00000472896 PNPLA1Q8N8W4 532 aa9.61□□□□□ -0.87
APTX-216ENST00000472896 B3GNT7Q8NFL0 401 aa9.61□□□□□ -0.87
APTX-216ENST00000472896 SH3RF2Q8TEC5 729 aa9.61□□□□□ -0.87
APTX-216ENST00000472896 DACT3Q96B18 629 aaPredicted RBP9.61□□□□□ -0.87
APTX-216ENST00000472896 IMP4Q96G21 291 aaKnown RBP9.61□□□□□ -0.87
APTX-216ENST00000472896 KCNC2Q96PR1 638 aa9.61□□□□□ -0.87
APTX-216ENST00000472896 OR5M11Q96RB7 305 aa9.61□□□□□ -0.87
APTX-216ENST00000472896 HHATLQ9HCP6 504 aa9.61□□□□□ -0.87
APTX-216ENST00000472896 ZDHHC4Q9NPG8 344 aa9.61□□□□□ -0.87
APTX-216ENST00000472896 IFT46Q9NQC8 304 aa9.61□□□□□ -0.87
APTX-216ENST00000472896 FARSBQ9NSD9 589 aaKnown RBP9.61□□□□□ -0.87
APTX-216ENST00000472896 MED9Q9NWA0 146 aa9.61□□□□□ -0.87
APTX-216ENST00000472896 CLN6Q9NWW5 311 aa9.61□□□□□ -0.87
APTX-216ENST00000472896 IMPAD1Q9NX62 359 aa9.61□□□□□ -0.87
APTX-216ENST00000472896 SIRT5Q9NXA8 310 aa9.61□□□□□ -0.87
APTX-216ENST00000472896 MS4A12Q9NXJ0 267 aa9.61□□□□□ -0.87
APTX-216ENST00000472896 SLC39A1Q9NY26 324 aa9.61□□□□□ -0.87
APTX-216ENST00000472896 SLC6A14Q9UN76 642 aa9.61□□□□□ -0.87
APTX-216ENST00000472896 ANKRD36A6QL64 1941 aa9.61□□□□□ -0.87
APTX-216ENST00000472896 IGSF10Q6WRI0 2623 aa9.61□□□□□ -0.87
APTX-216ENST00000472896 A0A1W2PQL4 384 aaPredicted RBP9.6□□□□□ -0.87
APTX-216ENST00000472896 C2orf78A6NCI8 922 aa9.6□□□□□ -0.87
APTX-216ENST00000472896 INMT-MINDY4F8WBC2 141 aa9.6□□□□□ -0.87
APTX-216ENST00000472896 GFRA2O00451 464 aa9.6□□□□□ -0.87
APTX-216ENST00000472896 OTCP00480 354 aa9.6□□□□□ -0.87
APTX-216ENST00000472896 CYP17A1P05093 508 aa9.6□□□□□ -0.87
APTX-216ENST00000472896 OR56A5P0C7T3 313 aa9.6□□□□□ -0.87
APTX-216ENST00000472896 SLC2A2P11168 524 aaPredicted RBP9.6□□□□□ -0.87
APTX-216ENST00000472896 HLA-EP13747 358 aa9.6□□□□□ -0.87
APTX-216ENST00000472896 RAB3AP20336 220 aa9.6□□□□□ -0.87
APTX-216ENST00000472896 LHCGRP22888 699 aa9.6□□□□□ -0.87
APTX-216ENST00000472896 KDELR2P33947 212 aa9.6□□□□□ -0.87
APTX-216ENST00000472896 CCT3P49368 545 aaKnown RBP9.6□□□□□ -0.87
APTX-216ENST00000472896 ARSDP51689 593 aa9.6□□□□□ -0.87
APTX-216ENST00000472896 CLCNKAP51800 687 aa9.6□□□□□ -0.87
APTX-216ENST00000472896 AP1S2P56377 157 aa9.6□□□□□ -0.87
APTX-216ENST00000472896 TP53BP2Q13625 1128 aa9.6□□□□□ -0.87
APTX-216ENST00000472896 VMACQ2NL98 169 aa9.6□□□□□ -0.87
APTX-216ENST00000472896 HSD17B12Q53GQ0 312 aa9.6□□□□□ -0.87
APTX-216ENST00000472896 ZNF628Q5EBL2 1059 aa9.6□□□□□ -0.87
APTX-216ENST00000472896 SPANXN4Q5MJ08 99 aa9.6□□□□□ -0.87
APTX-216ENST00000472896 LYSMD4Q5XG99 296 aa9.6□□□□□ -0.87
APTX-216ENST00000472896 PAQR3Q6TCH7 311 aa9.6□□□□□ -0.87
APTX-216ENST00000472896 LIMS2Q7Z4I7 341 aa9.6□□□□□ -0.87
APTX-216ENST00000472896 ASPGQ86U10 573 aa9.6□□□□□ -0.87
APTX-216ENST00000472896 LDB1Q86U70 411 aaPredicted RBP9.6□□□□□ -0.87
APTX-216ENST00000472896 GPSM1Q86YR5 675 aa9.6□□□□□ -0.87
APTX-216ENST00000472896 SPNS2Q8IVW8 549 aa9.6□□□□□ -0.87
APTX-216ENST00000472896 TAGAPQ8N103 731 aa9.6□□□□□ -0.87
APTX-216ENST00000472896 THEM5Q8N1Q8 247 aa9.6□□□□□ -0.87
APTX-216ENST00000472896 IL17RCQ8NAC3 791 aa9.6□□□□□ -0.87
APTX-216ENST00000472896 WDR36Q8NI36 951 aaKnown RBP9.6□□□□□ -0.87
APTX-216ENST00000472896 C2orf15Q8WU43 125 aaKnown RBP9.6□□□□□ -0.87
APTX-216ENST00000472896 ST8SIA4Q92187 359 aa9.6□□□□□ -0.87
APTX-216ENST00000472896 LRIG1Q96JA1 1093 aa9.6□□□□□ -0.87
APTX-216ENST00000472896 SOSTQ9BQB4 213 aa9.6□□□□□ -0.87
APTX-216ENST00000472896 TKTL2Q9H0I9 626 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms