RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 SLC25A23Q9BV35 468 aa15.79■□□□□ 0.12
CCM2-205ENST00000472223 ZNF385DQ9H6B1 395 aa15.79■□□□□ 0.12
CCM2-205ENST00000472223 IL17BQ9UHF5 180 aa15.79■□□□□ 0.12
CCM2-205ENST00000472223 NDUFAF1Q9Y375 327 aa15.79■□□□□ 0.12
CCM2-205ENST00000472223 IGKV3D-11A0A0A0MRZ8 115 aa15.78■□□□□ 0.12
CCM2-205ENST00000472223 TMEM8BA6NDV4 472 aa15.78■□□□□ 0.12
CCM2-205ENST00000472223 A8MUA0 341 aa15.78■□□□□ 0.12
CCM2-205ENST00000472223 C17orf105B2RV13 164 aa15.78■□□□□ 0.12
CCM2-205ENST00000472223 RNASET2O00584 256 aaKnown RBP15.78■□□□□ 0.12
CCM2-205ENST00000472223 ANP32DO95626 131 aa15.78■□□□□ 0.12
CCM2-205ENST00000472223 ATP1B1P05026 303 aa15.78■□□□□ 0.12
CCM2-205ENST00000472223 ICAM2P13598 275 aa15.78■□□□□ 0.12
CCM2-205ENST00000472223 PGDP52209 483 aa15.78■□□□□ 0.12
CCM2-205ENST00000472223 DGKQP52824 942 aa15.78■□□□□ 0.12
CCM2-205ENST00000472223 AP2B1P63010 937 aa15.78■□□□□ 0.12
CCM2-205ENST00000472223 HSPB3Q12988 150 aa15.78■□□□□ 0.12
CCM2-205ENST00000472223 CYLC2Q14093 348 aaPredicted RBP15.78■□□□□ 0.12
CCM2-205ENST00000472223 MLC1Q15049 377 aa15.78■□□□□ 0.12
CCM2-205ENST00000472223 TIGD2Q4W5G0 525 aa15.78■□□□□ 0.12
CCM2-205ENST00000472223 FAM180BQ6P0A1 224 aa15.78■□□□□ 0.12
CCM2-205ENST00000472223 GALNT12Q8IXK2 581 aa15.78■□□□□ 0.12
CCM2-205ENST00000472223 SHISA5Q8N114 240 aa15.78■□□□□ 0.12
CCM2-205ENST00000472223 TRIML2Q8N7C3 387 aa15.78■□□□□ 0.12
CCM2-205ENST00000472223 THAP4Q8WY91 577 aa15.78■□□□□ 0.12
CCM2-205ENST00000472223 CIDECQ96AQ7 238 aaPredicted RBP15.78■□□□□ 0.12
CCM2-205ENST00000472223 PPWD1Q96BP3 646 aaKnown RBP15.78■□□□□ 0.12
CCM2-205ENST00000472223 C3orf14Q9HBI5 128 aa15.78■□□□□ 0.12
CCM2-205ENST00000472223 NEUROD4Q9HD90 331 aa15.78■□□□□ 0.12
CCM2-205ENST00000472223 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.78■□□□□ 0.12
CCM2-205ENST00000472223 ARMCX1Q9P291 453 aa15.78■□□□□ 0.12
CCM2-205ENST00000472223 COPS7AQ9UBW8 275 aa15.78■□□□□ 0.12
CCM2-205ENST00000472223 MRPS18BQ9Y676 258 aaKnown RBP15.78■□□□□ 0.12
CCM2-205ENST00000472223 NSG1A0A0A6YYJ2 146 aa15.77■□□□□ 0.12
CCM2-205ENST00000472223 MYOCOSA0A1B0GUC4 107 aa15.77■□□□□ 0.12
CCM2-205ENST00000472223 A0A1W2PP18 115 aa15.77■□□□□ 0.12
CCM2-205ENST00000472223 CDC14CA4D256 554 aa15.77■□□□□ 0.12
CCM2-205ENST00000472223 C9JVG2 144 aa15.77■□□□□ 0.12
CCM2-205ENST00000472223 BCAS2O75934 225 aaPredicted RBP15.77■□□□□ 0.12
CCM2-205ENST00000472223 CPSF4O95639 269 aaKnown RBP15.77■□□□□ 0.12
CCM2-205ENST00000472223 IL12AP29459 219 aa15.77■□□□□ 0.12
CCM2-205ENST00000472223 EIF2S3P41091 472 aaKnown RBP15.77■□□□□ 0.12
CCM2-205ENST00000472223 UCNP55089 124 aa15.77■□□□□ 0.12
CCM2-205ENST00000472223 FOXL2P58012 376 aa15.77■□□□□ 0.12
CCM2-205ENST00000472223 EEF1A2Q05639 463 aaKnown RBP15.77■□□□□ 0.12
CCM2-205ENST00000472223 RCAN2Q14206 197 aa15.77■□□□□ 0.12
CCM2-205ENST00000472223 TERF2Q15554 542 aa15.77■□□□□ 0.12
CCM2-205ENST00000472223 CEBPEQ15744 281 aa15.77■□□□□ 0.12
CCM2-205ENST00000472223 SPDYE7PQ495Y7 208 aa15.77■□□□□ 0.12
CCM2-205ENST00000472223 ZNF385BQ569K4 471 aa15.77■□□□□ 0.12
CCM2-205ENST00000472223 BHLHB9Q6PI77 547 aa15.77■□□□□ 0.12
CCM2-205ENST00000472223 CCDC81Q6ZN84 652 aa15.77■□□□□ 0.12
CCM2-205ENST00000472223 LANCL3Q6ZV70 420 aa15.77■□□□□ 0.12
CCM2-205ENST00000472223 NDUFAF7Q7L592 441 aa15.77■□□□□ 0.12
CCM2-205ENST00000472223 PCYOX1LQ8NBM8 494 aa15.77■□□□□ 0.12
CCM2-205ENST00000472223 MORN4Q8NDC4 146 aa15.77■□□□□ 0.12
CCM2-205ENST00000472223 OR4A15Q8NGL6 344 aa15.77■□□□□ 0.12
CCM2-205ENST00000472223 DNAJB8Q8NHS0 232 aa15.77■□□□□ 0.12
CCM2-205ENST00000472223 RP9Q8TA86 221 aaKnown RBP15.77■□□□□ 0.12
CCM2-205ENST00000472223 FER1L6-AS2Q96M78 137 aa15.77■□□□□ 0.12
CCM2-205ENST00000472223 ZNF681Q96N22 645 aa15.77■□□□□ 0.12
CCM2-205ENST00000472223 AMDHD1Q96NU7 426 aa15.77■□□□□ 0.12
CCM2-205ENST00000472223 PANX1Q96RD7 426 aa15.77■□□□□ 0.12
CCM2-205ENST00000472223 TUBB6Q9BUF5 446 aa15.77■□□□□ 0.12
CCM2-205ENST00000472223 BTNL2Q9UIR0 455 aa15.77■□□□□ 0.12
CCM2-205ENST00000472223 LEF1Q9UJU2 399 aaPredicted RBP15.77■□□□□ 0.12
CCM2-205ENST00000472223 HS3ST3B1Q9Y662 390 aa15.77■□□□□ 0.12
CCM2-205ENST00000472223 LOC102723996A0A087X1L8 192 aa15.76■□□□□ 0.11
CCM2-205ENST00000472223 LOC100653049A0A140TA62 436 aa15.76■□□□□ 0.11
CCM2-205ENST00000472223 BBIP1A8MTZ0 92 aa15.76■□□□□ 0.11
CCM2-205ENST00000472223 RFXANKO14593 260 aa15.76■□□□□ 0.11
CCM2-205ENST00000472223 KRT34O76011 436 aa15.76■□□□□ 0.11
CCM2-205ENST00000472223 ABCB1P08183 1280 aaPredicted RBP15.76■□□□□ 0.11
CCM2-205ENST00000472223 RRADP55042 308 aa15.76■□□□□ 0.11
CCM2-205ENST00000472223 FOXK2Q01167 660 aa15.76■□□□□ 0.11
CCM2-205ENST00000472223 ZNF267Q14586 743 aaPredicted RBP15.76■□□□□ 0.11
CCM2-205ENST00000472223 EXT1Q16394 746 aa15.76■□□□□ 0.11
CCM2-205ENST00000472223 ZNF750Q32MQ0 723 aa15.76■□□□□ 0.11
CCM2-205ENST00000472223 VPS26BQ4G0F5 336 aa15.76■□□□□ 0.11
CCM2-205ENST00000472223 CRTC2Q53ET0 693 aaPredicted RBP15.76■□□□□ 0.11
CCM2-205ENST00000472223 C6orf10Q5SRN2 563 aa15.76■□□□□ 0.11
CCM2-205ENST00000472223 FAM69BQ5VUD6 431 aa15.76■□□□□ 0.11
CCM2-205ENST00000472223 PAPD4Q6PIY7 484 aaKnown RBP15.76■□□□□ 0.11
CCM2-205ENST00000472223 GK5Q6ZS86 529 aa15.76■□□□□ 0.11
CCM2-205ENST00000472223 VPS33AQ96AX1 596 aa15.76■□□□□ 0.11
CCM2-205ENST00000472223 MOAP1Q96BY2 351 aa15.76■□□□□ 0.11
CCM2-205ENST00000472223 C8orf44Q96CB5 159 aa15.76■□□□□ 0.11
CCM2-205ENST00000472223 ERP27Q96DN0 273 aa15.76■□□□□ 0.11
CCM2-205ENST00000472223 CNPPD1Q9BV87 410 aa15.76■□□□□ 0.11
CCM2-205ENST00000472223 CCDC106Q9BWC9 280 aa15.76■□□□□ 0.11
CCM2-205ENST00000472223 ZNF700Q9H0M5 742 aa15.76■□□□□ 0.11
CCM2-205ENST00000472223 MYLK2Q9H1R3 596 aa15.76■□□□□ 0.11
CCM2-205ENST00000472223 GLIPR2Q9H4G4 154 aa15.76■□□□□ 0.11
CCM2-205ENST00000472223 TAS2R9Q9NYW1 312 aa15.76■□□□□ 0.11
CCM2-205ENST00000472223 VPS4AQ9UN37 437 aa15.76■□□□□ 0.11
CCM2-205ENST00000472223 SNX8Q9Y5X2 465 aa15.76■□□□□ 0.11
CCM2-205ENST00000472223 SAGE2PA6NJ88 616 aa15.75■□□□□ 0.11
CCM2-205ENST00000472223 SEC24DO94855 1032 aaPredicted RBP15.75■□□□□ 0.11
CCM2-205ENST00000472223 KCNH1O95259 989 aa15.75■□□□□ 0.11
CCM2-205ENST00000472223 C6orf47O95873 294 aa15.75■□□□□ 0.11
CCM2-205ENST00000472223 HPP00738 406 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms