RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 UGT2B4P06133 528 aa5.78□□□□□ -1.48
SMC5-202ENST00000471372 TSPAN8P19075 237 aa5.78□□□□□ -1.48
SMC5-202ENST00000471372 C4BPBP20851 252 aa5.78□□□□□ -1.48
SMC5-202ENST00000471372 GIFP27352 417 aa5.78□□□□□ -1.48
SMC5-202ENST00000471372 HTR2AP28223 471 aa5.78□□□□□ -1.48
SMC5-202ENST00000471372 CA8P35219 290 aa5.78□□□□□ -1.48
SMC5-202ENST00000471372 TAGLN2P37802 199 aaKnown RBP5.78□□□□□ -1.48
SMC5-202ENST00000471372 MTIF2P46199 727 aaKnown RBP5.78□□□□□ -1.48
SMC5-202ENST00000471372 KRTAP1-1Q07627 177 aa5.78□□□□□ -1.48
SMC5-202ENST00000471372 KIAA1644Q3SXP7 199 aa5.78□□□□□ -1.48
SMC5-202ENST00000471372 DPY19L2P2Q6ZN68 376 aa5.78□□□□□ -1.48
SMC5-202ENST00000471372 SH2D5Q6ZV89 423 aa5.78□□□□□ -1.48
SMC5-202ENST00000471372 LACC1Q8IV20 430 aa5.78□□□□□ -1.48
SMC5-202ENST00000471372 ZNF679Q8IYX0 411 aa5.78□□□□□ -1.48
SMC5-202ENST00000471372 WDR36Q8NI36 951 aaKnown RBP5.78□□□□□ -1.48
SMC5-202ENST00000471372 OSTF1Q92882 214 aa5.78□□□□□ -1.48
SMC5-202ENST00000471372 AZIN2Q96A70 460 aa5.78□□□□□ -1.48
SMC5-202ENST00000471372 GIMAP5Q96F15 307 aa5.78□□□□□ -1.48
SMC5-202ENST00000471372 UHRF2Q96PU4 802 aa5.78□□□□□ -1.48
SMC5-202ENST00000471372 VPS35Q96QK1 796 aa5.78□□□□□ -1.48
SMC5-202ENST00000471372 RBM24Q9BX46 236 aaKnown RBP5.78□□□□□ -1.48
SMC5-202ENST00000471372 GDAP2Q9NXN4 497 aa5.78□□□□□ -1.48
SMC5-202ENST00000471372 MRPS7Q9Y2R9 242 aaKnown RBP5.78□□□□□ -1.48
SMC5-202ENST00000471372 MAB21L2Q9Y586 359 aa5.78□□□□□ -1.48
SMC5-202ENST00000471372 STK36Q9NRP7 1315 aa5.77□□□□□ -1.49
SMC5-202ENST00000471372 A0A1W2PR80 420 aa5.77□□□□□ -1.49
SMC5-202ENST00000471372 A8MU76 341 aa5.77□□□□□ -1.49
SMC5-202ENST00000471372 E9PMD0 336 aa5.77□□□□□ -1.49
SMC5-202ENST00000471372 SGK494L7N484 410 aa5.77□□□□□ -1.49
SMC5-202ENST00000471372 SMAD6O43541 496 aaKnown RBP5.77□□□□□ -1.49
SMC5-202ENST00000471372 STK17BO94768 372 aa5.77□□□□□ -1.49
SMC5-202ENST00000471372 CAVIN2O95810 425 aa5.77□□□□□ -1.49
SMC5-202ENST00000471372 AXLP30530 894 aa5.77□□□□□ -1.49
SMC5-202ENST00000471372 MAT2AP31153 395 aaKnown RBP5.77□□□□□ -1.49
SMC5-202ENST00000471372 TRIM23P36406 574 aa5.77□□□□□ -1.49
SMC5-202ENST00000471372 RPL27P61353 136 aaKnown RBP5.77□□□□□ -1.49
SMC5-202ENST00000471372 EXOSC2Q13868 293 aaKnown RBP5.77□□□□□ -1.49
SMC5-202ENST00000471372 ZNF699Q32M78 642 aa5.77□□□□□ -1.49
SMC5-202ENST00000471372 RABGAP1LQ5R372 815 aa5.77□□□□□ -1.49
SMC5-202ENST00000471372 STEAP1BQ6NZ63 245 aa5.77□□□□□ -1.49
SMC5-202ENST00000471372 ZNF730Q6ZMV8 503 aa5.77□□□□□ -1.49
SMC5-202ENST00000471372 ASRGL1Q7L266 308 aa5.77□□□□□ -1.49
SMC5-202ENST00000471372 FAM131BQ86XD5 332 aa5.77□□□□□ -1.49
SMC5-202ENST00000471372 CBWD2Q8IUF1 395 aa5.77□□□□□ -1.49
SMC5-202ENST00000471372 SLC22A15Q8IZD6 547 aa5.77□□□□□ -1.49
SMC5-202ENST00000471372 LINC00518Q8N0U6 118 aa5.77□□□□□ -1.49
SMC5-202ENST00000471372 ARFGAP2Q8N6H7 521 aa5.77□□□□□ -1.49
SMC5-202ENST00000471372 CNBD1Q8NA66 436 aa5.77□□□□□ -1.49
SMC5-202ENST00000471372 GOLGA5Q8TBA6 731 aa5.77□□□□□ -1.49
SMC5-202ENST00000471372 RDH11Q8TC12 318 aa5.77□□□□□ -1.49
SMC5-202ENST00000471372 ZNRF4Q8WWF5 429 aa5.77□□□□□ -1.49
SMC5-202ENST00000471372 LIPHQ8WWY8 451 aa5.77□□□□□ -1.49
SMC5-202ENST00000471372 DCTN5Q9BTE1 182 aa5.77□□□□□ -1.49
SMC5-202ENST00000471372 RAB11FIP5Q9BXF6 653 aa5.77□□□□□ -1.49
SMC5-202ENST00000471372 TRIM6Q9C030 488 aaPredicted RBP5.77□□□□□ -1.49
SMC5-202ENST00000471372 UBE2TQ9NPD8 197 aaPredicted RBP5.77□□□□□ -1.49
SMC5-202ENST00000471372 AGPAT5Q9NUQ2 364 aa5.77□□□□□ -1.49
SMC5-202ENST00000471372 CACNA1IQ9P0X4 2223 aa5.76□□□□□ -1.49
SMC5-202ENST00000471372 C15orf38-AP3S2A0A0A6YYH1 394 aa5.76□□□□□ -1.49
SMC5-202ENST00000471372 EME2A4GXA9 379 aaPredicted RBP5.76□□□□□ -1.49
SMC5-202ENST00000471372 ASB14A6NK59 587 aa5.76□□□□□ -1.49
SMC5-202ENST00000471372 A8MUI8 341 aa5.76□□□□□ -1.49
SMC5-202ENST00000471372 TCP10L2B9ZVM9 353 aa5.76□□□□□ -1.49
SMC5-202ENST00000471372 H3BMH7 237 aa5.76□□□□□ -1.49
SMC5-202ENST00000471372 ZNF195O14628 629 aa5.76□□□□□ -1.49
SMC5-202ENST00000471372 KIAA0754O94854 1291 aa5.76□□□□□ -1.49
SMC5-202ENST00000471372 UFL1O94874 794 aa5.76□□□□□ -1.49
SMC5-202ENST00000471372 CLPTM1O96005 669 aa5.76□□□□□ -1.49
SMC5-202ENST00000471372 CRYAAP02489 173 aa5.76□□□□□ -1.49
SMC5-202ENST00000471372 ANXA4P09525 319 aaPredicted RBP5.76□□□□□ -1.49
SMC5-202ENST00000471372 MBL2P11226 248 aaPredicted RBP5.76□□□□□ -1.49
SMC5-202ENST00000471372 AMD1P17707 334 aa5.76□□□□□ -1.49
SMC5-202ENST00000471372 MATKP42679 507 aa5.76□□□□□ -1.49
SMC5-202ENST00000471372 LEPRP48357 1165 aaKnown RBP5.76□□□□□ -1.49
SMC5-202ENST00000471372 SGSHP51688 502 aa5.76□□□□□ -1.49
SMC5-202ENST00000471372 NAPAP54920 295 aa5.76□□□□□ -1.49
SMC5-202ENST00000471372 NANOS2P60321 138 aaKnown RBP5.76□□□□□ -1.49
SMC5-202ENST00000471372 HNRNPDQ14103 355 aaKnown RBP5.76□□□□□ -1.49
SMC5-202ENST00000471372 EFTUD2Q15029 972 aaKnown RBP eCLIP5.76□□□□□ -1.49
SMC5-202ENST00000471372 TPD52L1Q16890 204 aaPredicted RBP5.76□□□□□ -1.49
SMC5-202ENST00000471372 ACSF3Q4G176 576 aaPredicted RBP5.76□□□□□ -1.49
SMC5-202ENST00000471372 ZNF311Q5JNZ3 666 aa5.76□□□□□ -1.49
SMC5-202ENST00000471372 PAQR9Q6ZVX9 377 aa5.76□□□□□ -1.49
SMC5-202ENST00000471372 GPBP1Q86WP2 473 aa5.76□□□□□ -1.49
SMC5-202ENST00000471372 EIF1ADQ8N9N8 165 aaKnown RBP5.76□□□□□ -1.49
SMC5-202ENST00000471372 TMEM178AQ8NBL3 297 aa5.76□□□□□ -1.49
SMC5-202ENST00000471372 OR10G8Q8NGN5 311 aa5.76□□□□□ -1.49
SMC5-202ENST00000471372 RPLP0P6Q8NHW5 317 aa5.76□□□□□ -1.49
SMC5-202ENST00000471372 ATP8B4Q8TF62 1192 aa5.76□□□□□ -1.49
SMC5-202ENST00000471372 RNF139Q8WU17 664 aa5.76□□□□□ -1.49
SMC5-202ENST00000471372 SMAP2Q8WU79 429 aaPredicted RBP5.76□□□□□ -1.49
SMC5-202ENST00000471372 TCP11Q8WWU5 503 aa5.76□□□□□ -1.49
SMC5-202ENST00000471372 PINX1Q96BK5 328 aaKnown RBP5.76□□□□□ -1.49
SMC5-202ENST00000471372 SLC25A36Q96CQ1 311 aa5.76□□□□□ -1.49
SMC5-202ENST00000471372 ZNF486Q96H40 463 aaPredicted RBP5.76□□□□□ -1.49
SMC5-202ENST00000471372 VSTM2LQ96N03 204 aa5.76□□□□□ -1.49
SMC5-202ENST00000471372 PSKH2Q96QS6 385 aa5.76□□□□□ -1.49
SMC5-202ENST00000471372 ALG12Q9BV10 488 aa5.76□□□□□ -1.49
SMC5-202ENST00000471372 VCX2Q9H322 139 aa5.76□□□□□ -1.49
SMC5-202ENST00000471372 KAT8Q9H7Z6 458 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms