RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 PSMA8Q8TAA3 256 aa16.49■□□□□ 0.23
HSPG2-208ENST00000471322 SMIM10Q96HG1 83 aa16.49■□□□□ 0.23
HSPG2-208ENST00000471322 BBS4Q96RK4 519 aa16.49■□□□□ 0.23
HSPG2-208ENST00000471322 TMEM38AQ9H6F2 299 aa16.49■□□□□ 0.23
HSPG2-208ENST00000471322 GIMAP4Q9NUV9 329 aa16.49■□□□□ 0.23
HSPG2-208ENST00000471322 PHF11Q9UIL8 331 aa16.49■□□□□ 0.23
HSPG2-208ENST00000471322 V9GYQ6 96 aa16.49■□□□□ 0.23
HSPG2-208ENST00000471322 CROCCQ5TZA2 2017 aa16.49■□□□□ 0.23
HSPG2-208ENST00000471322 IGHV5-10-1A0A0J9YXX1 117 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 A0A1W2PR48 441 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 H0YGG7 62 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 PROM1O43490 865 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 TNFRSF21O75509 655 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 ZNF888P0CJ79 500 aaPredicted RBP16.48■□□□□ 0.23
HSPG2-208ENST00000471322 CERS1P27544 350 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 MAGEA8P43361 318 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 MVDP53602 400 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 GFERP55789 205 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 ARF3P61204 181 aaPredicted RBP16.48■□□□□ 0.23
HSPG2-208ENST00000471322 PPP1CAP62136 330 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 GPLD1P80108 840 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 FOLH1Q04609 750 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 ELOAQ14241 798 aaKnown RBP16.48■□□□□ 0.23
HSPG2-208ENST00000471322 GALNT4Q8N4A0 578 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 FAM110BQ8TC76 370 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 GATA6Q92908 595 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 NEURL3Q96EH8 262 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 ZNF597Q96LX8 424 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 FCRL4Q96PJ5 515 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 CIB1Q99828 191 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 TRIM4Q9C037 500 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 EPS8L2Q9H6S3 715 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 CXorf36Q9H7Y0 433 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 SYNPO2LQ9H987 977 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 MS4A12Q9NXJ0 267 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 DNAJB9Q9UBS3 223 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 SATB2Q9UPW6 733 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 ATG4BQ9Y4P1 393 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 SNX8Q9Y5X2 465 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 AK5Q9Y6K8 562 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 RNF103-CHMP3A0A140T963 221 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 C4orf51C9J302 202 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 DENRO43583 198 aaKnown RBP16.48■□□□□ 0.23
HSPG2-208ENST00000471322 PROS1P07225 676 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 LSSP48449 732 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 ZNF630Q2M218 657 aaPredicted RBP16.48■□□□□ 0.23
HSPG2-208ENST00000471322 SPDYE7PQ495Y7 208 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 ZC3H12BQ5HYM0 836 aaKnown RBP16.48■□□□□ 0.23
HSPG2-208ENST00000471322 SLC48A1Q6P1K1 146 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 ENPP6Q6UWR7 440 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 SLITRK4Q8IW52 837 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 SAMD14Q8IZD0 417 aaPredicted RBP16.48■□□□□ 0.23
HSPG2-208ENST00000471322 CCDC74BQ96LY2 380 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 TGM7Q96PF1 710 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 DPH2Q9BQC3 489 aaPredicted RBP16.48■□□□□ 0.23
HSPG2-208ENST00000471322 ASPSCR1Q9BZE9 553 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 C1GALT1Q9NS00 363 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 SEMA3GQ9NS98 782 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 THUMPD1Q9NXG2 353 aaKnown RBP16.48■□□□□ 0.23
HSPG2-208ENST00000471322 FBXW2Q9UKT8 454 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 ENTPD4Q9Y227 616 aa16.48■□□□□ 0.23
HSPG2-208ENST00000471322 MAP1BP46821 2468 aaKnown RBP16.47■□□□□ 0.23
HSPG2-208ENST00000471322 MYO1GB0I1T2 1018 aa16.47■□□□□ 0.23
HSPG2-208ENST00000471322 TXNDC9O14530 226 aa16.47■□□□□ 0.23
HSPG2-208ENST00000471322 B3GALT2O43825 422 aa16.47■□□□□ 0.23
HSPG2-208ENST00000471322 PRSS23O95084 383 aa16.47■□□□□ 0.23
HSPG2-208ENST00000471322 AIFM1O95831 613 aa16.47■□□□□ 0.23
HSPG2-208ENST00000471322 C1QCP02747 245 aa16.47■□□□□ 0.23
HSPG2-208ENST00000471322 CDH3P22223 829 aa16.47■□□□□ 0.23
HSPG2-208ENST00000471322 TLX1P31314 330 aaPredicted RBP16.47■□□□□ 0.23
HSPG2-208ENST00000471322 BUD31P41223 144 aaPredicted RBP16.47■□□□□ 0.23
HSPG2-208ENST00000471322 CAPZBP47756 277 aa16.47■□□□□ 0.23
HSPG2-208ENST00000471322 EPHA4P54764 986 aa16.47■□□□□ 0.23
HSPG2-208ENST00000471322 ZFP36L1Q07352 338 aaKnown RBP16.47■□□□□ 0.23
HSPG2-208ENST00000471322 LRRC23Q53EV4 343 aaPredicted RBP16.47■□□□□ 0.23
HSPG2-208ENST00000471322 SAXO2Q658L1 398 aa16.47■□□□□ 0.23
HSPG2-208ENST00000471322 BHLHB9Q6PI77 547 aa16.47■□□□□ 0.23
HSPG2-208ENST00000471322 UNQ6494/PRO21346Q6UXR6 183 aa16.47■□□□□ 0.23
HSPG2-208ENST00000471322 CBLL1Q75N03 491 aa16.47■□□□□ 0.23
HSPG2-208ENST00000471322 EIF3MQ7L2H7 374 aaKnown RBP16.47■□□□□ 0.23
HSPG2-208ENST00000471322 RNF130Q86XS8 419 aa16.47■□□□□ 0.23
HSPG2-208ENST00000471322 CLEC4FQ8N1N0 589 aa16.47■□□□□ 0.23
HSPG2-208ENST00000471322 AMDHD1Q96NU7 426 aa16.47■□□□□ 0.23
HSPG2-208ENST00000471322 OSBPL11Q9BXB4 747 aa16.47■□□□□ 0.23
HSPG2-208ENST00000471322 TMEM121BQ9BXQ6 578 aaPredicted RBP16.47■□□□□ 0.23
HSPG2-208ENST00000471322 SLAMF7Q9NQ25 335 aa16.47■□□□□ 0.23
HSPG2-208ENST00000471322 GPATCH2Q9NW75 528 aa16.47■□□□□ 0.23
HSPG2-208ENST00000471322 ADPRHL2Q9NX46 363 aa16.47■□□□□ 0.23
HSPG2-208ENST00000471322 MAP4K5Q9Y4K4 846 aa16.47■□□□□ 0.23
HSPG2-208ENST00000471322 DSPP15924 2871 aaKnown RBP16.47■□□□□ 0.23
HSPG2-208ENST00000471322 APC2O95996 2303 aa16.46■□□□□ 0.23
HSPG2-208ENST00000471322 IFNA14P01570 189 aa16.46■□□□□ 0.23
HSPG2-208ENST00000471322 NR2F6P10588 404 aa16.46■□□□□ 0.23
HSPG2-208ENST00000471322 ETFAP13804 333 aa16.46■□□□□ 0.23
HSPG2-208ENST00000471322 PVRP15151 417 aa16.46■□□□□ 0.23
HSPG2-208ENST00000471322 ALOX12P18054 663 aa16.46■□□□□ 0.23
HSPG2-208ENST00000471322 CSNK2A2P19784 350 aaPredicted RBP16.46■□□□□ 0.23
HSPG2-208ENST00000471322 MPIP34949 423 aa16.46■□□□□ 0.23
HSPG2-208ENST00000471322 GABREP78334 506 aa16.46■□□□□ 0.23
HSPG2-208ENST00000471322 C16orf72Q14CZ0 275 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms