RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 CCDC80Q76M96 950 aa8.83□□□□□ -1
VPS52-216ENST00000471309 KBTBD2Q8IY47 623 aa8.83□□□□□ -1
VPS52-216ENST00000471309 CCDC116Q8IYX3 515 aa8.83□□□□□ -1
VPS52-216ENST00000471309 EID2Q8N6I1 236 aa8.83□□□□□ -1
VPS52-216ENST00000471309 METTL25Q8N6Q8 603 aa8.83□□□□□ -1
VPS52-216ENST00000471309 OR9A2Q8NGT5 310 aa8.83□□□□□ -1
VPS52-216ENST00000471309 OR2I1PQ8NGU4 316 aa8.83□□□□□ -1
VPS52-216ENST00000471309 MIPOL1Q8TD10 442 aa8.83□□□□□ -1
VPS52-216ENST00000471309 DNAJC9Q8WXX5 260 aa8.83□□□□□ -1
VPS52-216ENST00000471309 MAL2Q969L2 176 aa8.83□□□□□ -1
VPS52-216ENST00000471309 PPWD1Q96BP3 646 aaKnown RBP8.83□□□□□ -1
VPS52-216ENST00000471309 MVB12AQ96EY5 273 aa8.83□□□□□ -1
VPS52-216ENST00000471309 CENPNQ96H22 339 aaPredicted RBP8.83□□□□□ -1
VPS52-216ENST00000471309 DPYSL5Q9BPU6 564 aa8.83□□□□□ -1
VPS52-216ENST00000471309 NUDT22Q9BRQ3 303 aa8.83□□□□□ -1
VPS52-216ENST00000471309 CHID1Q9BWS9 393 aa8.83□□□□□ -1
VPS52-216ENST00000471309 TMEM121BQ9BXQ6 578 aaPredicted RBP8.83□□□□□ -1
VPS52-216ENST00000471309 SERHL2Q9H4I8 314 aa8.83□□□□□ -1
VPS52-216ENST00000471309 C3orf14Q9HBI5 128 aa8.83□□□□□ -1
VPS52-216ENST00000471309 IRAK4Q9NWZ3 460 aa8.83□□□□□ -1
VPS52-216ENST00000471309 PDP2Q9P2J9 529 aa8.83□□□□□ -1
VPS52-216ENST00000471309 GMEB2Q9UKD1 530 aa8.83□□□□□ -1
VPS52-216ENST00000471309 CNOT11Q9UKZ1 510 aaKnown RBP8.83□□□□□ -1
VPS52-216ENST00000471309 ANGPT4Q9Y264 503 aa8.83□□□□□ -1
VPS52-216ENST00000471309 ZNF451Q9Y4E5 1061 aa8.83□□□□□ -1
VPS52-216ENST00000471309 DTNAQ9Y4J8 743 aa8.83□□□□□ -1
VPS52-216ENST00000471309 LRRC42Q9Y546 428 aa8.83□□□□□ -1
VPS52-216ENST00000471309 V9GYQ6 96 aa8.83□□□□□ -1
VPS52-216ENST00000471309 A0A1W2PQM1 296 aa8.82□□□□□ -1
VPS52-216ENST00000471309 A0A1W2PS29 197 aa8.82□□□□□ -1
VPS52-216ENST00000471309 CPED1A4D0V7 1026 aa8.82□□□□□ -1
VPS52-216ENST00000471309 H0YJX3 145 aa8.82□□□□□ -1
VPS52-216ENST00000471309 PLOD2O00469 737 aa8.82□□□□□ -1
VPS52-216ENST00000471309 EMC8O43402 210 aa8.82□□□□□ -1
VPS52-216ENST00000471309 CHST10O43529 356 aa8.82□□□□□ -1
VPS52-216ENST00000471309 GALR2O43603 387 aaPredicted RBP8.82□□□□□ -1
VPS52-216ENST00000471309 ASNA1O43681 348 aa8.82□□□□□ -1
VPS52-216ENST00000471309 FGF17O60258 216 aa8.82□□□□□ -1
VPS52-216ENST00000471309 TPST1O60507 370 aa8.82□□□□□ -1
VPS52-216ENST00000471309 DEAF1O75398 565 aaPredicted RBP8.82□□□□□ -1
VPS52-216ENST00000471309 ZNF682O95780 498 aa8.82□□□□□ -1
VPS52-216ENST00000471309 GPR75O95800 540 aa8.82□□□□□ -1
VPS52-216ENST00000471309 LDLRP01130 860 aa8.82□□□□□ -1
VPS52-216ENST00000471309 RPLP0P05388 317 aaKnown RBP8.82□□□□□ -1
VPS52-216ENST00000471309 PORP16435 677 aaPredicted RBP8.82□□□□□ -1
VPS52-216ENST00000471309 MC3RP41968 323 aa8.82□□□□□ -1
VPS52-216ENST00000471309 MAGEA2P43356 314 aa8.82□□□□□ -1
VPS52-216ENST00000471309 SEPHS1P49903 392 aa8.82□□□□□ -1
VPS52-216ENST00000471309 ANXA11P50995 505 aaKnown RBP8.82□□□□□ -1
VPS52-216ENST00000471309 DUSP3P51452 185 aaPredicted RBP8.82□□□□□ -1
VPS52-216ENST00000471309 XKP51811 444 aa8.82□□□□□ -1
VPS52-216ENST00000471309 CRYBA2P53672 197 aa8.82□□□□□ -1
VPS52-216ENST00000471309 MAPK10P53779 464 aa8.82□□□□□ -1
VPS52-216ENST00000471309 CASP9P55211 416 aa8.82□□□□□ -1
VPS52-216ENST00000471309 PCBP3P57721 371 aaKnown RBP8.82□□□□□ -1
VPS52-216ENST00000471309 RPS26P62854 115 aaKnown RBP8.82□□□□□ -1
VPS52-216ENST00000471309 FOLH1Q04609 750 aa8.82□□□□□ -1
VPS52-216ENST00000471309 KCNAB1Q14722 419 aa8.82□□□□□ -1
VPS52-216ENST00000471309 MYBPC3Q14896 1274 aa8.82□□□□□ -1
VPS52-216ENST00000471309 TAF11Q15544 211 aa8.82□□□□□ -1
VPS52-216ENST00000471309 LTB4RQ15722 352 aa8.82□□□□□ -1
VPS52-216ENST00000471309 GPR19Q15760 415 aa8.82□□□□□ -1
VPS52-216ENST00000471309 LPAL2Q16609 132 aa8.82□□□□□ -1
VPS52-216ENST00000471309 LRRC36Q1X8D7 754 aa8.82□□□□□ -1
VPS52-216ENST00000471309 FAM214AQ32MH5 1076 aa8.82□□□□□ -1
VPS52-216ENST00000471309 TLDC1Q6P9B6 456 aa8.82□□□□□ -1
VPS52-216ENST00000471309 TMEM107Q6UX40 140 aa8.82□□□□□ -1
VPS52-216ENST00000471309 FKBP9P1Q75LS8 142 aa8.82□□□□□ -1
VPS52-216ENST00000471309 EIF3MQ7L2H7 374 aaKnown RBP8.82□□□□□ -1
VPS52-216ENST00000471309 LGI4Q8N135 537 aa8.82□□□□□ -1
VPS52-216ENST00000471309 OR2L13Q8N349 312 aa8.82□□□□□ -1
VPS52-216ENST00000471309 HORMAD2Q8N7B1 307 aa8.82□□□□□ -1
VPS52-216ENST00000471309 TMEM52Q8NDY8 209 aa8.82□□□□□ -1
VPS52-216ENST00000471309 OR4D9Q8NGE8 314 aa8.82□□□□□ -1
VPS52-216ENST00000471309 NFKBIDQ8NI38 313 aa8.82□□□□□ -1
VPS52-216ENST00000471309 EME1Q96AY2 570 aa8.82□□□□□ -1
VPS52-216ENST00000471309 ELP4Q96EB1 424 aa8.82□□□□□ -1
VPS52-216ENST00000471309 PYURFQ96I23 114 aa8.82□□□□□ -1
VPS52-216ENST00000471309 MS4A4EQ96PG1 132 aa8.82□□□□□ -1
VPS52-216ENST00000471309 GTPBP2Q9BX10 602 aaKnown RBP8.82□□□□□ -1
VPS52-216ENST00000471309 SPRTNQ9H040 489 aaPredicted RBP8.82□□□□□ -1
VPS52-216ENST00000471309 SEMA6AQ9H2E6 1030 aa8.82□□□□□ -1
VPS52-216ENST00000471309 VCXQ9H320 206 aa8.82□□□□□ -1
VPS52-216ENST00000471309 FANCEQ9HB96 536 aa8.82□□□□□ -1
VPS52-216ENST00000471309 C8orf4Q9NR00 106 aa8.82□□□□□ -1
VPS52-216ENST00000471309 ADPRHL2Q9NX46 363 aa8.82□□□□□ -1
VPS52-216ENST00000471309 NTMQ9P121 344 aa8.82□□□□□ -1
VPS52-216ENST00000471309 PTGFRNQ9P2B2 879 aa8.82□□□□□ -1
VPS52-216ENST00000471309 CLCA2Q9UQC9 943 aa8.82□□□□□ -1
VPS52-216ENST00000471309 MRPS33Q9Y291 106 aaKnown RBP8.82□□□□□ -1
VPS52-216ENST00000471309 PCDHGB2Q9Y5G2 931 aa8.82□□□□□ -1
VPS52-216ENST00000471309 NUP210LQ5VU65 1888 aa8.82□□□□□ -1
VPS52-216ENST00000471309 TRIOO75962 3097 aa8.82□□□□□ -1
VPS52-216ENST00000471309 A0A087WV62 115 aa8.81□□□□□ -1
VPS52-216ENST00000471309 FAM149AA5PLN7 773 aa8.81□□□□□ -1
VPS52-216ENST00000471309 TMEM247A6NEH6 219 aa8.81□□□□□ -1
VPS52-216ENST00000471309 TMEM150CB9EJG8 249 aa8.81□□□□□ -1
VPS52-216ENST00000471309 HMGN4O00479 90 aa8.81□□□□□ -1
VPS52-216ENST00000471309 KHNYNO15037 678 aaKnown RBP8.81□□□□□ -1
VPS52-216ENST00000471309 GCM2O75603 506 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms