RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 PAN3Q58A45 887 aaKnown RBP0.95□□□□□ -2.26
UBXN4-207ENST00000471246 SEL1L2Q5TEA6 688 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 C1orf189Q5VU69 101 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 FAM219BQ5XKK7 198 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 SNRNP48Q6IEG0 339 aaKnown RBP0.95□□□□□ -2.26
UBXN4-207ENST00000471246 TATDN1Q6P1N9 297 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 IGFL2Q6UWQ7 119 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 IGFL3Q6UXB1 125 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 NHLRC1Q6VVB1 395 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 CYP4V2Q6ZWL3 525 aaPredicted RBP0.95□□□□□ -2.26
UBXN4-207ENST00000471246 ITIH5Q86UX2 942 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 METTL23Q86XA0 190 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 LAX1Q8IWV1 398 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 GPR137CQ8N3F9 429 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 GOLGA5Q8TBA6 731 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 FRAT1Q92837 279 aaPredicted RBP0.95□□□□□ -2.26
UBXN4-207ENST00000471246 FAM162AQ96A26 154 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 VSIG2Q96IQ7 327 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 PIWIL1Q96J94 861 aaKnown RBP0.95□□□□□ -2.26
UBXN4-207ENST00000471246 MAGEB18Q96M61 343 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 CASD1Q96PB1 797 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 SSX3Q99909 188 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 AGPAT1Q99943 283 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 IDI2Q9BXS1 227 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 NUSAP1Q9BXS6 441 aaKnown RBP0.95□□□□□ -2.26
UBXN4-207ENST00000471246 EDEM3Q9BZQ6 932 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 SRD5A3Q9H8P0 318 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 ADGRL4Q9HBW9 690 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 IMPAD1Q9NX62 359 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 MIS18AQ9NYP9 233 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 SPG21Q9NZD8 308 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 KLRF1Q9NZS2 232 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 TMEM9Q9P0T7 183 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 RPS6KB2Q9UBS0 482 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 SEC14L4Q9UDX3 406 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 PRODH2Q9UF12 536 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 PSORS1C1Q9UIG5 152 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 ARHGAP21Q5T5U3 1957 aa0.95□□□□□ -2.26
UBXN4-207ENST00000471246 ACEP12821 1306 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 TMEM129A0AVI4 362 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 SH3PXD2BA1X283 911 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 FAM231BA6NCW3 169 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 TRABD2BA6NFA1 517 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 SLC15A5A6NIM6 579 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 MEI4A8MW99 385 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 H7C0S8 307 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 IFIT3O14879 490 aaKnown RBP0.94□□□□□ -2.26
UBXN4-207ENST00000471246 ZNF861PO60384 105 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 GLCEO94923 617 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 GJB5O95377 273 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 ACTL6AO96019 429 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 IGHV3-9P01782 118 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 IGKV3-11P04433 115 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 PROS1P07225 676 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 GSTA2P09210 222 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 SNRPCP09234 159 aaKnown RBP0.94□□□□□ -2.26
UBXN4-207ENST00000471246 CD1EP15812 388 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 UCP1P25874 307 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 IL2RGP31785 369 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 FRKP42685 505 aaPredicted RBP0.94□□□□□ -2.26
UBXN4-207ENST00000471246 MAGEB1P43366 347 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 TNFSF10P50591 281 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 UCNP55089 124 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 WNT4P56705 351 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 ARHGAP1Q07960 439 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 HSPA14Q0VDF9 509 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 TFCP2Q12800 502 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 OVGP1Q12889 678 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 PTK6Q13882 451 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 HEPACAMQ14CZ8 416 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 P2RY14Q15391 338 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 OR1C1Q15619 314 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 MPP7Q5T2T1 576 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 PET117Q6UWS5 81 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 CLEC4GQ6UXB4 293 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 MOB2Q70IA6 237 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 ZNF677Q86XU0 584 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 APOBEC3FQ8IUX4 373 aaKnown RBP0.94□□□□□ -2.26
UBXN4-207ENST00000471246 KLHL7Q8IXQ5 586 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 KLHDC8AQ8IYD2 350 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 NUP93Q8N1F7 819 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 NHLRC2Q8NBF2 726 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 RELL2Q8NC24 303 aaPredicted RBP0.94□□□□□ -2.26
UBXN4-207ENST00000471246 TRPV3Q8NET8 790 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 OR13F1Q8NGS4 319 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 FBXO25Q8TCJ0 367 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 AFAP1L1Q8TED9 768 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 SETD7Q8WTS6 366 aaKnown RBP0.94□□□□□ -2.26
UBXN4-207ENST00000471246 UBLCP1Q8WVY7 318 aaPredicted RBP0.94□□□□□ -2.26
UBXN4-207ENST00000471246 PRCCQ92733 491 aaPredicted RBP0.94□□□□□ -2.26
UBXN4-207ENST00000471246 MR1Q95460 341 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 ULK4Q96C45 1275 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 BIRC7Q96CA5 298 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 FAM122AQ96E09 287 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 OR5M11Q96RB7 305 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 SERINC2Q96SA4 455 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 S1PR3Q99500 378 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 KIR2DL4Q99706 377 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 RNF41Q9H4P4 317 aaPredicted RBP0.94□□□□□ -2.26
UBXN4-207ENST00000471246 ISG20L2Q9H9L3 353 aaKnown RBP0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms