RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 RBM18Q96H35 190 aaKnown RBP18.39■□□□□ 0.53
HDAC7-220ENST00000471235 FBXL20Q96IG2 436 aa18.39■□□□□ 0.53
HDAC7-220ENST00000471235 PPP3R2Q96LZ3 170 aa18.39■□□□□ 0.53
HDAC7-220ENST00000471235 CCT7Q99832 543 aa18.39■□□□□ 0.53
HDAC7-220ENST00000471235 DEFB126Q9BYW3 111 aa18.39■□□□□ 0.53
HDAC7-220ENST00000471235 RNF32Q9H0A6 362 aa18.39■□□□□ 0.53
HDAC7-220ENST00000471235 PLA2G3Q9NZ20 509 aa18.39■□□□□ 0.53
HDAC7-220ENST00000471235 LUZP4Q9P127 313 aa18.39■□□□□ 0.53
HDAC7-220ENST00000471235 UTS2RQ9UKP6 389 aa18.39■□□□□ 0.53
HDAC7-220ENST00000471235 SHANK1Q9Y566 2161 aa18.39■□□□□ 0.53
HDAC7-220ENST00000471235 WDPCPO95876 746 aa18.38■□□□□ 0.53
HDAC7-220ENST00000471235 F10P00742 488 aa18.38■□□□□ 0.53
HDAC7-220ENST00000471235 IGKV3-11P04433 115 aa18.38■□□□□ 0.53
HDAC7-220ENST00000471235 SDC1P18827 310 aa18.38■□□□□ 0.53
HDAC7-220ENST00000471235 GALNSP34059 522 aa18.38■□□□□ 0.53
HDAC7-220ENST00000471235 RPL14P50914 215 aaKnown RBP18.38■□□□□ 0.53
HDAC7-220ENST00000471235 HK2P52789 917 aa18.38■□□□□ 0.53
HDAC7-220ENST00000471235 ERVK-8P63133 956 aa18.38■□□□□ 0.53
HDAC7-220ENST00000471235 C2orf80Q0P641 193 aa18.38■□□□□ 0.53
HDAC7-220ENST00000471235 ATG16L1Q676U5 607 aa18.38■□□□□ 0.53
HDAC7-220ENST00000471235 FAM180BQ6P0A1 224 aa18.38■□□□□ 0.53
HDAC7-220ENST00000471235 Q6ZS92 163 aa18.38■□□□□ 0.53
HDAC7-220ENST00000471235 IKBIPQ70UQ0 350 aa18.38■□□□□ 0.53
HDAC7-220ENST00000471235 KIRREL3Q8IZU9 778 aa18.38■□□□□ 0.53
HDAC7-220ENST00000471235 Q8NA96 180 aa18.38■□□□□ 0.53
HDAC7-220ENST00000471235 PNPLA2Q96AD5 504 aa18.38■□□□□ 0.53
HDAC7-220ENST00000471235 CNRIP1Q96F85 164 aaPredicted RBP18.38■□□□□ 0.53
HDAC7-220ENST00000471235 CNPPD1Q9BV87 410 aa18.38■□□□□ 0.53
HDAC7-220ENST00000471235 ACBD3Q9H3P7 528 aa18.38■□□□□ 0.53
HDAC7-220ENST00000471235 CDCP1Q9H5V8 836 aa18.38■□□□□ 0.53
HDAC7-220ENST00000471235 CXorf21Q9HAI6 301 aa18.38■□□□□ 0.53
HDAC7-220ENST00000471235 PNPOQ9NVS9 261 aa18.38■□□□□ 0.53
HDAC7-220ENST00000471235 EHD3Q9NZN3 535 aa18.38■□□□□ 0.53
HDAC7-220ENST00000471235 COPS7AQ9UBW8 275 aa18.38■□□□□ 0.53
HDAC7-220ENST00000471235 EXO1Q9UQ84 846 aaKnown RBP18.38■□□□□ 0.53
HDAC7-220ENST00000471235 ERVK-19Q9WJR5 959 aa18.38■□□□□ 0.53
HDAC7-220ENST00000471235 TMED5Q9Y3A6 229 aa18.38■□□□□ 0.53
HDAC7-220ENST00000471235 SUV39H1O43463 412 aa18.37■□□□□ 0.53
HDAC7-220ENST00000471235 DYRK3O43781 588 aa18.37■□□□□ 0.53
HDAC7-220ENST00000471235 PEX11AO75192 247 aa18.37■□□□□ 0.53
HDAC7-220ENST00000471235 SORBS2O94875 1100 aaKnown RBP18.37■□□□□ 0.53
HDAC7-220ENST00000471235 CT62P0C5K7 136 aa18.37■□□□□ 0.53
HDAC7-220ENST00000471235 PORP16435 677 aaPredicted RBP18.37■□□□□ 0.53
HDAC7-220ENST00000471235 DDCP20711 480 aa18.37■□□□□ 0.53
HDAC7-220ENST00000471235 PTGER1P34995 402 aa18.37■□□□□ 0.53
HDAC7-220ENST00000471235 FEN1P39748 380 aaKnown RBP18.37■□□□□ 0.53
HDAC7-220ENST00000471235 MLF1P58340 268 aa18.37■□□□□ 0.53
HDAC7-220ENST00000471235 PPP2R2AP63151 447 aa18.37■□□□□ 0.53
HDAC7-220ENST00000471235 ARG2P78540 354 aa18.37■□□□□ 0.53
HDAC7-220ENST00000471235 OCRLQ01968 901 aa18.37■□□□□ 0.53
HDAC7-220ENST00000471235 ATP6AP1LQ52LC2 224 aa18.37■□□□□ 0.53
HDAC7-220ENST00000471235 RPS19BP1Q86WX3 136 aaKnown RBP18.37■□□□□ 0.53
HDAC7-220ENST00000471235 ARMC10Q8N2F6 343 aa18.37■□□□□ 0.53
HDAC7-220ENST00000471235 THAP3Q8WTV1 239 aaPredicted RBP18.37■□□□□ 0.53
HDAC7-220ENST00000471235 RIT1Q92963 219 aa18.37■□□□□ 0.53
HDAC7-220ENST00000471235 EXOSC8Q96B26 276 aaKnown RBP18.37■□□□□ 0.53
HDAC7-220ENST00000471235 SENP5Q96HI0 755 aaPredicted RBP18.37■□□□□ 0.53
HDAC7-220ENST00000471235 EGLN2Q96KS0 407 aa18.37■□□□□ 0.53
HDAC7-220ENST00000471235 ART5Q96L15 291 aa18.37■□□□□ 0.53
HDAC7-220ENST00000471235 ZNF681Q96N22 645 aa18.37■□□□□ 0.53
HDAC7-220ENST00000471235 MANSC1Q9H8J5 431 aa18.37■□□□□ 0.53
HDAC7-220ENST00000471235 THAP1Q9NVV9 213 aa18.37■□□□□ 0.53
HDAC7-220ENST00000471235 STMN3Q9NZ72 180 aa18.37■□□□□ 0.53
HDAC7-220ENST00000471235 PSME2Q9UL46 239 aa18.37■□□□□ 0.53
HDAC7-220ENST00000471235 B3GNT3Q9Y2A9 372 aa18.37■□□□□ 0.53
HDAC7-220ENST00000471235 DYTNA2CJ06 578 aa18.36■□□□□ 0.53
HDAC7-220ENST00000471235 GABRR3A8MPY1 467 aa18.36■□□□□ 0.53
HDAC7-220ENST00000471235 ZFAND5O76080 213 aa18.36■□□□□ 0.53
HDAC7-220ENST00000471235 CLPSP04118 112 aa18.36■□□□□ 0.53
HDAC7-220ENST00000471235 ATP1B1P05026 303 aa18.36■□□□□ 0.53
HDAC7-220ENST00000471235 CSNK2A2P19784 350 aaPredicted RBP18.36■□□□□ 0.53
HDAC7-220ENST00000471235 NT5EP21589 574 aa18.36■□□□□ 0.53
HDAC7-220ENST00000471235 CASRP41180 1078 aa18.36■□□□□ 0.53
HDAC7-220ENST00000471235 ST13P50502 369 aaKnown RBP18.36■□□□□ 0.53
HDAC7-220ENST00000471235 ZNF267Q14586 743 aaPredicted RBP18.36■□□□□ 0.53
HDAC7-220ENST00000471235 PRSS53Q2L4Q9 553 aa18.36■□□□□ 0.53
HDAC7-220ENST00000471235 C6orf136Q5SQH8 315 aa18.36■□□□□ 0.53
HDAC7-220ENST00000471235 HSDL2Q6YN16 418 aa18.36■□□□□ 0.53
HDAC7-220ENST00000471235 PRICKLE2Q7Z3G6 844 aa18.36■□□□□ 0.53
HDAC7-220ENST00000471235 GALNT12Q8IXK2 581 aa18.36■□□□□ 0.53
HDAC7-220ENST00000471235 LRRC25Q8N386 305 aaPredicted RBP18.36■□□□□ 0.53
HDAC7-220ENST00000471235 HAS2Q92819 552 aa18.36■□□□□ 0.53
HDAC7-220ENST00000471235 TUBGCP3Q96CW5 907 aa18.36■□□□□ 0.53
HDAC7-220ENST00000471235 PPP1R36Q96LQ0 422 aa18.36■□□□□ 0.53
HDAC7-220ENST00000471235 TSSK3Q96PN8 268 aa18.36■□□□□ 0.53
HDAC7-220ENST00000471235 C1orf50Q9BV19 199 aa18.36■□□□□ 0.53
HDAC7-220ENST00000471235 EPN3Q9H201 632 aa18.36■□□□□ 0.53
HDAC7-220ENST00000471235 MIEF1Q9NQG6 463 aa18.36■□□□□ 0.53
HDAC7-220ENST00000471235 PFDN4Q9NQP4 134 aa18.36■□□□□ 0.53
HDAC7-220ENST00000471235 ABI3Q9P2A4 366 aa18.36■□□□□ 0.53
HDAC7-220ENST00000471235 WBP11Q9Y2W2 641 aaKnown RBP18.36■□□□□ 0.53
HDAC7-220ENST00000471235 ZNF780BQ9Y6R6 833 aa18.36■□□□□ 0.53
HDAC7-220ENST00000471235 OR5H15A6NDH6 313 aa18.35■□□□□ 0.53
HDAC7-220ENST00000471235 TMEM200CA6NKL6 621 aa18.35■□□□□ 0.53
HDAC7-220ENST00000471235 KLF11O14901 512 aa18.35■□□□□ 0.53
HDAC7-220ENST00000471235 BCKDHAP12694 445 aa18.35■□□□□ 0.53
HDAC7-220ENST00000471235 TNFSF10P50591 281 aa18.35■□□□□ 0.53
HDAC7-220ENST00000471235 RNF4P78317 190 aa18.35■□□□□ 0.53
HDAC7-220ENST00000471235 LTB4RQ15722 352 aa18.35■□□□□ 0.53
HDAC7-220ENST00000471235 PLEKHN1Q494U1 663 aaPredicted RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms