RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 ZNF721Q8TF20 911 aa12.68□□□□□ -0.38
SSBP1-206ENST00000467681 ZNF75CPQ92670 426 aaPredicted RBP12.68□□□□□ -0.38
SSBP1-206ENST00000467681 ZNF681Q96N22 645 aa12.68□□□□□ -0.38
SSBP1-206ENST00000467681 NPAS2Q99743 824 aa12.68□□□□□ -0.38
SSBP1-206ENST00000467681 MFRPQ9BY79 579 aa12.68□□□□□ -0.38
SSBP1-206ENST00000467681 RNF32Q9H0A6 362 aa12.68□□□□□ -0.38
SSBP1-206ENST00000467681 CXorf21Q9HAI6 301 aa12.68□□□□□ -0.38
SSBP1-206ENST00000467681 MYNNQ9NPC7 610 aa12.68□□□□□ -0.38
SSBP1-206ENST00000467681 EHD3Q9NZN3 535 aa12.68□□□□□ -0.38
SSBP1-206ENST00000467681 ZNF223Q9UK11 482 aaPredicted RBP12.68□□□□□ -0.38
SSBP1-206ENST00000467681 UTS2RQ9UKP6 389 aa12.68□□□□□ -0.38
SSBP1-206ENST00000467681 EXO1Q9UQ84 846 aaKnown RBP12.68□□□□□ -0.38
SSBP1-206ENST00000467681 ATP6AP2A0A1C7CYW4 349 aa12.67□□□□□ -0.38
SSBP1-206ENST00000467681 DYTNA2CJ06 578 aa12.67□□□□□ -0.38
SSBP1-206ENST00000467681 CDK2AP1O14519 115 aa12.67□□□□□ -0.38
SSBP1-206ENST00000467681 KLF11O14901 512 aa12.67□□□□□ -0.38
SSBP1-206ENST00000467681 MAN1A2O60476 641 aa12.67□□□□□ -0.38
SSBP1-206ENST00000467681 PEX11AO75192 247 aa12.67□□□□□ -0.38
SSBP1-206ENST00000467681 ERAL1O75616 437 aaKnown RBP12.67□□□□□ -0.38
SSBP1-206ENST00000467681 ATP6AP2O75787 350 aa12.67□□□□□ -0.38
SSBP1-206ENST00000467681 BCKDHAP12694 445 aa12.67□□□□□ -0.38
SSBP1-206ENST00000467681 DDCP20711 480 aa12.67□□□□□ -0.38
SSBP1-206ENST00000467681 TACR1P25103 407 aa12.67□□□□□ -0.38
SSBP1-206ENST00000467681 FEN1P39748 380 aaKnown RBP12.67□□□□□ -0.38
SSBP1-206ENST00000467681 PPP2R2AP63151 447 aa12.67□□□□□ -0.38
SSBP1-206ENST00000467681 SPRED3Q2MJR0 410 aa12.67□□□□□ -0.38
SSBP1-206ENST00000467681 GALNTL6Q49A17 601 aa12.67□□□□□ -0.38
SSBP1-206ENST00000467681 ATP6AP1LQ52LC2 224 aa12.67□□□□□ -0.38
SSBP1-206ENST00000467681 HSDL2Q6YN16 418 aa12.67□□□□□ -0.38
SSBP1-206ENST00000467681 IKBIPQ70UQ0 350 aa12.67□□□□□ -0.38
SSBP1-206ENST00000467681 SAMD14Q8IZD0 417 aaPredicted RBP12.67□□□□□ -0.38
SSBP1-206ENST00000467681 ZNF321PQ8N8H1 164 aa12.67□□□□□ -0.38
SSBP1-206ENST00000467681 CATSPER1Q8NEC5 780 aa12.67□□□□□ -0.38
SSBP1-206ENST00000467681 OR8K3Q8NH51 312 aa12.67□□□□□ -0.38
SSBP1-206ENST00000467681 DOK4Q8TEW6 326 aa12.67□□□□□ -0.38
SSBP1-206ENST00000467681 PNPLA2Q96AD5 504 aa12.67□□□□□ -0.38
SSBP1-206ENST00000467681 CNRIP1Q96F85 164 aaPredicted RBP12.67□□□□□ -0.38
SSBP1-206ENST00000467681 FBXL20Q96IG2 436 aa12.67□□□□□ -0.38
SSBP1-206ENST00000467681 EGLN2Q96KS0 407 aa12.67□□□□□ -0.38
SSBP1-206ENST00000467681 ART5Q96L15 291 aa12.67□□□□□ -0.38
SSBP1-206ENST00000467681 ACBD3Q9H3P7 528 aa12.67□□□□□ -0.38
SSBP1-206ENST00000467681 SLC35C2Q9NQQ7 365 aa12.67□□□□□ -0.38
SSBP1-206ENST00000467681 GIMAP2Q9UG22 337 aa12.67□□□□□ -0.38
SSBP1-206ENST00000467681 BAIAP2L1Q9UHR4 511 aa12.67□□□□□ -0.38
SSBP1-206ENST00000467681 B3GNT3Q9Y2A9 372 aa12.67□□□□□ -0.38
SSBP1-206ENST00000467681 ZNF780BQ9Y6R6 833 aa12.67□□□□□ -0.38
SSBP1-206ENST00000467681 FASNP49327 2511 aaKnown RBP12.66□□□□□ -0.38
SSBP1-206ENST00000467681 TMEM200CA6NKL6 621 aa12.66□□□□□ -0.38
SSBP1-206ENST00000467681 HRKO00198 91 aa12.66□□□□□ -0.38
SSBP1-206ENST00000467681 PRKNO60260 465 aaPredicted RBP12.66□□□□□ -0.38
SSBP1-206ENST00000467681 SKAP2O75563 359 aaPredicted RBP12.66□□□□□ -0.38
SSBP1-206ENST00000467681 JUNP05412 331 aaKnown RBP12.66□□□□□ -0.38
SSBP1-206ENST00000467681 S1PR1P21453 382 aa12.66□□□□□ -0.38
SSBP1-206ENST00000467681 NT5EP21589 574 aa12.66□□□□□ -0.38
SSBP1-206ENST00000467681 CD96P40200 585 aa12.66□□□□□ -0.38
SSBP1-206ENST00000467681 CASRP41180 1078 aa12.66□□□□□ -0.38
SSBP1-206ENST00000467681 RPL38P63173 70 aaKnown RBP12.66□□□□□ -0.38
SSBP1-206ENST00000467681 RNF4P78317 190 aa12.66□□□□□ -0.38
SSBP1-206ENST00000467681 ARG2P78540 354 aa12.66□□□□□ -0.38
SSBP1-206ENST00000467681 OCRLQ01968 901 aa12.66□□□□□ -0.38
SSBP1-206ENST00000467681 EMX2Q04743 252 aa12.66□□□□□ -0.38
SSBP1-206ENST00000467681 MGAT2Q10469 447 aa12.66□□□□□ -0.38
SSBP1-206ENST00000467681 FUT7Q11130 342 aa12.66□□□□□ -0.38
SSBP1-206ENST00000467681 MAP4K2Q12851 820 aa12.66□□□□□ -0.38
SSBP1-206ENST00000467681 TLR1Q15399 786 aa12.66□□□□□ -0.38
SSBP1-206ENST00000467681 PRSS53Q2L4Q9 553 aa12.66□□□□□ -0.38
SSBP1-206ENST00000467681 SLC6A19Q695T7 634 aa12.66□□□□□ -0.38
SSBP1-206ENST00000467681 CCDC116Q8IYX3 515 aa12.66□□□□□ -0.38
SSBP1-206ENST00000467681 BEST3Q8N1M1 668 aa12.66□□□□□ -0.38
SSBP1-206ENST00000467681 OR5L2Q8NGL0 311 aa12.66□□□□□ -0.38
SSBP1-206ENST00000467681 KLHL29Q96CT2 875 aa12.66□□□□□ -0.38
SSBP1-206ENST00000467681 TUBGCP3Q96CW5 907 aa12.66□□□□□ -0.38
SSBP1-206ENST00000467681 C19orf60Q96EN9 201 aa12.66□□□□□ -0.38
SSBP1-206ENST00000467681 AKTIPQ9H8T0 292 aa12.66□□□□□ -0.38
SSBP1-206ENST00000467681 ABI3Q9P2A4 366 aa12.66□□□□□ -0.38
SSBP1-206ENST00000467681 CSAG2Q9Y5P2 127 aa12.66□□□□□ -0.38
SSBP1-206ENST00000467681 HEMK1Q9Y5R4 338 aaPredicted RBP12.66□□□□□ -0.38
SSBP1-206ENST00000467681 SVILO95425 2214 aa12.66□□□□□ -0.38
SSBP1-206ENST00000467681 ATMQ13315 3056 aa12.65□□□□□ -0.38
SSBP1-206ENST00000467681 VPS4BO75351 444 aa12.65□□□□□ -0.38
SSBP1-206ENST00000467681 ATP1B1P05026 303 aa12.65□□□□□ -0.38
SSBP1-206ENST00000467681 SDC1P18827 310 aa12.65□□□□□ -0.38
SSBP1-206ENST00000467681 MAPK1P28482 360 aa12.65□□□□□ -0.38
SSBP1-206ENST00000467681 ASMTP46597 345 aa12.65□□□□□ -0.38
SSBP1-206ENST00000467681 TNFSF10P50591 281 aa12.65□□□□□ -0.38
SSBP1-206ENST00000467681 HK2P52789 917 aa12.65□□□□□ -0.38
SSBP1-206ENST00000467681 ERVK-8P63133 956 aa12.65□□□□□ -0.38
SSBP1-206ENST00000467681 DUSP2Q05923 314 aa12.65□□□□□ -0.38
SSBP1-206ENST00000467681 CEBPEQ15744 281 aa12.65□□□□□ -0.38
SSBP1-206ENST00000467681 PDCD2Q16342 344 aaPredicted RBP12.65□□□□□ -0.38
SSBP1-206ENST00000467681 SMU1Q2TAY7 513 aa12.65□□□□□ -0.38
SSBP1-206ENST00000467681 COLEC12Q5KU26 742 aa12.65□□□□□ -0.38
SSBP1-206ENST00000467681 IL23RQ5VWK5 629 aa12.65□□□□□ -0.38
SSBP1-206ENST00000467681 FAM180BQ6P0A1 224 aa12.65□□□□□ -0.38
SSBP1-206ENST00000467681 TICAM1Q8IUC6 712 aa12.65□□□□□ -0.38
SSBP1-206ENST00000467681 GALNT12Q8IXK2 581 aa12.65□□□□□ -0.38
SSBP1-206ENST00000467681 LRRC25Q8N386 305 aaPredicted RBP12.65□□□□□ -0.38
SSBP1-206ENST00000467681 THAP3Q8WTV1 239 aaPredicted RBP12.65□□□□□ -0.38
SSBP1-206ENST00000467681 EXOSC8Q96B26 276 aaKnown RBP12.65□□□□□ -0.38
SSBP1-206ENST00000467681 CTHRC1Q96CG8 243 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms