RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 SCG5P05408 212 aa17.35■□□□□ 0.37
SYNE4-204ENST00000465425 IGFBP1P08833 259 aaPredicted RBP17.35■□□□□ 0.37
SYNE4-204ENST00000465425 RHAGQ02094 409 aa17.35■□□□□ 0.37
SYNE4-204ENST00000465425 OR4C11Q6IEV9 310 aa17.35■□□□□ 0.37
SYNE4-204ENST00000465425 PGBD2Q6P3X8 592 aa17.35■□□□□ 0.37
SYNE4-204ENST00000465425 C19orf48Q6RUI8 117 aa17.35■□□□□ 0.37
SYNE4-204ENST00000465425 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.35■□□□□ 0.37
SYNE4-204ENST00000465425 ST13P5Q8NFI4 369 aaPredicted RBP17.35■□□□□ 0.37
SYNE4-204ENST00000465425 OR5D16Q8NGK9 328 aa17.35■□□□□ 0.37
SYNE4-204ENST00000465425 OR8J1Q8NGP2 316 aa17.35■□□□□ 0.37
SYNE4-204ENST00000465425 SLC7A13Q8TCU3 470 aa17.35■□□□□ 0.37
SYNE4-204ENST00000465425 TMEM80Q96HE8 168 aa17.35■□□□□ 0.37
SYNE4-204ENST00000465425 DHRS1Q96LJ7 313 aa17.35■□□□□ 0.37
SYNE4-204ENST00000465425 C17orf62Q9BQA9 187 aa17.35■□□□□ 0.37
SYNE4-204ENST00000465425 MENTQ9BUN1 341 aa17.35■□□□□ 0.37
SYNE4-204ENST00000465425 RSPO3Q9BXY4 272 aaPredicted RBP17.35■□□□□ 0.37
SYNE4-204ENST00000465425 OR51I1Q9H343 314 aa17.35■□□□□ 0.37
SYNE4-204ENST00000465425 NT5DC2Q9H857 520 aa17.35■□□□□ 0.37
SYNE4-204ENST00000465425 SACM1LQ9NTJ5 587 aa17.35■□□□□ 0.37
SYNE4-204ENST00000465425 NDOR1Q9UHB4 597 aa17.35■□□□□ 0.37
SYNE4-204ENST00000465425 ADAM29Q9UKF5 820 aa17.35■□□□□ 0.37
SYNE4-204ENST00000465425 NINQ8N4C6 2090 aa17.35■□□□□ 0.37
SYNE4-204ENST00000465425 A0A1W2PPV9 198 aa17.35■□□□□ 0.37
SYNE4-204ENST00000465425 TMEM221A6NGB7 291 aa17.35■□□□□ 0.37
SYNE4-204ENST00000465425 KMOO15229 486 aa17.35■□□□□ 0.37
SYNE4-204ENST00000465425 PCDH8O95206 1070 aa17.35■□□□□ 0.37
SYNE4-204ENST00000465425 PTTG1O95997 202 aa17.35■□□□□ 0.37
SYNE4-204ENST00000465425 HTRA3P83110 453 aa17.35■□□□□ 0.37
SYNE4-204ENST00000465425 PIN1Q13526 163 aaPredicted RBP17.35■□□□□ 0.37
SYNE4-204ENST00000465425 SSX1Q16384 188 aa17.35■□□□□ 0.37
SYNE4-204ENST00000465425 NDUFAF5Q5TEU4 345 aa17.35■□□□□ 0.37
SYNE4-204ENST00000465425 TRIM69Q86WT6 500 aa17.35■□□□□ 0.37
SYNE4-204ENST00000465425 OR4D11Q8NGI4 311 aa17.35■□□□□ 0.37
SYNE4-204ENST00000465425 ZNF764Q96H86 408 aaPredicted RBP17.35■□□□□ 0.37
SYNE4-204ENST00000465425 FERD3LQ96RJ6 166 aa17.35■□□□□ 0.37
SYNE4-204ENST00000465425 OSGEPL1Q9H4B0 414 aa17.35■□□□□ 0.37
SYNE4-204ENST00000465425 FZD3Q9NPG1 666 aa17.35■□□□□ 0.37
SYNE4-204ENST00000465425 ZCCHC3Q9NUD5 404 aaKnown RBP17.35■□□□□ 0.37
SYNE4-204ENST00000465425 HAT1O14929 419 aa17.34■□□□□ 0.37
SYNE4-204ENST00000465425 CKMT1AP12532 417 aa17.34■□□□□ 0.37
SYNE4-204ENST00000465425 TNNI3P19429 210 aa17.34■□□□□ 0.37
SYNE4-204ENST00000465425 IL12RB1P42701 662 aa17.34■□□□□ 0.37
SYNE4-204ENST00000465425 UBE3AQ05086 875 aa17.34■□□□□ 0.37
SYNE4-204ENST00000465425 KRR1Q13601 381 aaKnown RBP17.34■□□□□ 0.37
SYNE4-204ENST00000465425 MLC1Q15049 377 aa17.34■□□□□ 0.37
SYNE4-204ENST00000465425 TCEANCQ8N8B7 351 aa17.34■□□□□ 0.37
SYNE4-204ENST00000465425 OPALINQ96PE5 141 aa17.34■□□□□ 0.37
SYNE4-204ENST00000465425 FNDC11Q9BVV2 318 aa17.34■□□□□ 0.37
SYNE4-204ENST00000465425 MND1Q9BWT6 205 aa17.34■□□□□ 0.37
SYNE4-204ENST00000465425 TAPBPLQ9BX59 468 aa17.34■□□□□ 0.37
SYNE4-204ENST00000465425 SERHL2Q9H4I8 314 aa17.34■□□□□ 0.37
SYNE4-204ENST00000465425 DDX31Q9H8H2 851 aaKnown RBP17.34■□□□□ 0.37
SYNE4-204ENST00000465425 ACAD8Q9UKU7 415 aa17.34■□□□□ 0.37
SYNE4-204ENST00000465425 SLC9A8Q9Y2E8 581 aa17.34■□□□□ 0.37
SYNE4-204ENST00000465425 PCDHGB6Q9Y5F9 930 aa17.34■□□□□ 0.37
SYNE4-204ENST00000465425 DNMT3AQ9Y6K1 912 aaPredicted RBP17.34■□□□□ 0.37
SYNE4-204ENST00000465425 LCMT2O60294 686 aaKnown RBP17.33■□□□□ 0.37
SYNE4-204ENST00000465425 TPST2O60704 377 aa17.33■□□□□ 0.37
SYNE4-204ENST00000465425 NTSP30990 170 aa17.33■□□□□ 0.37
SYNE4-204ENST00000465425 SOX3P41225 446 aa17.33■□□□□ 0.37
SYNE4-204ENST00000465425 DEFA1P59665 94 aa17.33■□□□□ 0.37
SYNE4-204ENST00000465425 DEFA3P59666 94 aa17.33■□□□□ 0.37
SYNE4-204ENST00000465425 NCF4Q15080 339 aa17.33■□□□□ 0.37
SYNE4-204ENST00000465425 SPHARQ15513 63 aa17.33■□□□□ 0.37
SYNE4-204ENST00000465425 WSCD2Q2TBF2 565 aa17.33■□□□□ 0.37
SYNE4-204ENST00000465425 GAB4Q2WGN9 574 aa17.33■□□□□ 0.37
SYNE4-204ENST00000465425 FAM78AQ5JUQ0 283 aa17.33■□□□□ 0.37
SYNE4-204ENST00000465425 TMEM201Q5SNT2 666 aa17.33■□□□□ 0.37
SYNE4-204ENST00000465425 PIP5KL1Q5T9C9 394 aa17.33■□□□□ 0.37
SYNE4-204ENST00000465425 C12orf73Q69YU5 71 aa17.33■□□□□ 0.37
SYNE4-204ENST00000465425 LINC01555Q8NAE3 123 aa17.33■□□□□ 0.37
SYNE4-204ENST00000465425 SP7Q8TDD2 431 aaPredicted RBP17.33■□□□□ 0.37
SYNE4-204ENST00000465425 C12orf66Q96MD2 445 aa17.33■□□□□ 0.37
SYNE4-204ENST00000465425 KCNS3Q9BQ31 491 aa17.33■□□□□ 0.37
SYNE4-204ENST00000465425 WFDC6Q9BQY6 131 aa17.33■□□□□ 0.37
SYNE4-204ENST00000465425 DPH7Q9BTV6 452 aa17.33■□□□□ 0.37
SYNE4-204ENST00000465425 CNPPD1Q9BV87 410 aa17.33■□□□□ 0.37
SYNE4-204ENST00000465425 FAIM2Q9BWQ8 316 aa17.33■□□□□ 0.37
SYNE4-204ENST00000465425 GLIPR2Q9H4G4 154 aa17.33■□□□□ 0.37
SYNE4-204ENST00000465425 ZSCAN32Q9NX65 697 aa17.33■□□□□ 0.37
SYNE4-204ENST00000465425 QPCTLQ9NXS2 382 aa17.33■□□□□ 0.37
SYNE4-204ENST00000465425 CRNNQ9UBG3 495 aaPredicted RBP17.33■□□□□ 0.37
SYNE4-204ENST00000465425 GPC6Q9Y625 555 aaPredicted RBP17.33■□□□□ 0.37
SYNE4-204ENST00000465425 PDZK1P1A8MUH7 402 aa17.33■□□□□ 0.36
SYNE4-204ENST00000465425 M0R3H8 397 aa17.33■□□□□ 0.36
SYNE4-204ENST00000465425 DRD2P14416 443 aa17.33■□□□□ 0.36
SYNE4-204ENST00000465425 PSMA1P25786 263 aaKnown RBP17.33■□□□□ 0.36
SYNE4-204ENST00000465425 NCBP2P52298 156 aaKnown RBP eCLIP17.33■□□□□ 0.36
SYNE4-204ENST00000465425 PRKAG1P54619 331 aa17.33■□□□□ 0.36
SYNE4-204ENST00000465425 TRA2BP62995 288 aaKnown RBP17.33■□□□□ 0.36
SYNE4-204ENST00000465425 CSNK1G2P78368 415 aa17.33■□□□□ 0.36
SYNE4-204ENST00000465425 C1DQ13901 141 aaKnown RBP17.33■□□□□ 0.36
SYNE4-204ENST00000465425 CAMK1Q14012 370 aa17.33■□□□□ 0.36
SYNE4-204ENST00000465425 NCCRP1Q6ZVX7 275 aaPredicted RBP17.33■□□□□ 0.36
SYNE4-204ENST00000465425 UBE3DQ7Z6J8 389 aa17.33■□□□□ 0.36
SYNE4-204ENST00000465425 AMER3Q8N944 861 aa17.33■□□□□ 0.36
SYNE4-204ENST00000465425 UCN3Q969E3 161 aa17.33■□□□□ 0.36
SYNE4-204ENST00000465425 BBS4Q96RK4 519 aa17.33■□□□□ 0.36
SYNE4-204ENST00000465425 SPATA5L1Q9BVQ7 753 aa17.33■□□□□ 0.36
SYNE4-204ENST00000465425 TSSK6Q9BXA6 273 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms