RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 ANKRD55Q3KP44 614 aa4.5□□□□□ -1.69
PTCD3-205ENST00000464541 AARDQ4LEZ3 155 aa4.5□□□□□ -1.69
PTCD3-205ENST00000464541 MPPE1Q53F39 396 aa4.5□□□□□ -1.69
PTCD3-205ENST00000464541 ABRAXAS1Q6UWZ7 409 aa4.5□□□□□ -1.69
PTCD3-205ENST00000464541 ITIH5Q86UX2 942 aa4.5□□□□□ -1.69
PTCD3-205ENST00000464541 WDR49Q8IV35 697 aa4.5□□□□□ -1.69
PTCD3-205ENST00000464541 FBXO25Q8TCJ0 367 aa4.5□□□□□ -1.69
PTCD3-205ENST00000464541 UBTD2Q8WUN7 234 aa4.5□□□□□ -1.69
PTCD3-205ENST00000464541 BCL2L2Q92843 193 aaPredicted RBP4.5□□□□□ -1.69
PTCD3-205ENST00000464541 GLYATL1Q969I3 302 aa4.5□□□□□ -1.69
PTCD3-205ENST00000464541 ZBP1Q9H171 429 aa4.5□□□□□ -1.69
PTCD3-205ENST00000464541 MMADHCQ9H3L0 296 aaPredicted RBP4.5□□□□□ -1.69
PTCD3-205ENST00000464541 ELL3Q9HB65 397 aaPredicted RBP4.5□□□□□ -1.69
PTCD3-205ENST00000464541 ABCC13Q9NSE7 274 aa4.5□□□□□ -1.69
PTCD3-205ENST00000464541 CUTCQ9NTM9 273 aa4.5□□□□□ -1.69
PTCD3-205ENST00000464541 POGZQ7Z3K3 1410 aa4.49□□□□□ -1.69
PTCD3-205ENST00000464541 A8MU10 97 aa4.49□□□□□ -1.69
PTCD3-205ENST00000464541 PSMD3O43242 534 aa4.49□□□□□ -1.69
PTCD3-205ENST00000464541 TXNDC12O95881 172 aa4.49□□□□□ -1.69
PTCD3-205ENST00000464541 NUDT17P0C025 328 aa4.49□□□□□ -1.69
PTCD3-205ENST00000464541 TPBGLP0DKB5 382 aa4.49□□□□□ -1.69
PTCD3-205ENST00000464541 CALML3P27482 149 aa4.49□□□□□ -1.69
PTCD3-205ENST00000464541 MTIF2P46199 727 aaKnown RBP4.49□□□□□ -1.69
PTCD3-205ENST00000464541 ADARP55265 1226 aaKnown RBP4.49□□□□□ -1.69
PTCD3-205ENST00000464541 TEFQ10587 303 aa4.49□□□□□ -1.69
PTCD3-205ENST00000464541 TTC31Q49AM3 519 aaPredicted RBP4.49□□□□□ -1.69
PTCD3-205ENST00000464541 WDR25Q64LD2 544 aaPredicted RBP4.49□□□□□ -1.69
PTCD3-205ENST00000464541 RHBDD2Q6NTF9 364 aa4.49□□□□□ -1.69
PTCD3-205ENST00000464541 ARL14Q8N4G2 192 aa4.49□□□□□ -1.69
PTCD3-205ENST00000464541 CHDHQ8NE62 594 aaPredicted RBP4.49□□□□□ -1.69
PTCD3-205ENST00000464541 OR6T1Q8NGN1 323 aa4.49□□□□□ -1.69
PTCD3-205ENST00000464541 OR4F5Q8NH21 305 aa4.49□□□□□ -1.69
PTCD3-205ENST00000464541 CAPNS2Q96L46 248 aa4.49□□□□□ -1.69
PTCD3-205ENST00000464541 C19orf43Q9BQ61 176 aa4.49□□□□□ -1.69
PTCD3-205ENST00000464541 NTMT1Q9BV86 223 aa4.49□□□□□ -1.69
PTCD3-205ENST00000464541 FAM212BQ9NTI7 297 aaPredicted RBP4.49□□□□□ -1.69
PTCD3-205ENST00000464541 ACOXLQ9NUZ1 547 aa4.49□□□□□ -1.69
PTCD3-205ENST00000464541 EIF3KQ9UBQ5 218 aaKnown RBP4.49□□□□□ -1.69
PTCD3-205ENST00000464541 MRTO4Q9UKD2 239 aaKnown RBP4.49□□□□□ -1.69
PTCD3-205ENST00000464541 FBXW2Q9UKT8 454 aa4.49□□□□□ -1.69
PTCD3-205ENST00000464541 NAALAD2Q9Y3Q0 740 aa4.49□□□□□ -1.69
PTCD3-205ENST00000464541 ATG4BQ9Y4P1 393 aa4.49□□□□□ -1.69
PTCD3-205ENST00000464541 ZNF487B1APH4 448 aa4.48□□□□□ -1.69
PTCD3-205ENST00000464541 MCF2LO15068 1137 aa4.48□□□□□ -1.69
PTCD3-205ENST00000464541 THY1P04216 161 aa4.48□□□□□ -1.69
PTCD3-205ENST00000464541 CHRNGP07510 517 aa4.48□□□□□ -1.69
PTCD3-205ENST00000464541 SNRPCP09234 159 aaKnown RBP4.48□□□□□ -1.69
PTCD3-205ENST00000464541 KRTAP1-4P0C5Y4 121 aa4.48□□□□□ -1.69
PTCD3-205ENST00000464541 KIAA1024LP59773 190 aa4.48□□□□□ -1.69
PTCD3-205ENST00000464541 WASHC5Q12768 1159 aa4.48□□□□□ -1.69
PTCD3-205ENST00000464541 SMC1AQ14683 1233 aaKnown RBP4.48□□□□□ -1.69
PTCD3-205ENST00000464541 IFI44LQ53G44 452 aa4.48□□□□□ -1.69
PTCD3-205ENST00000464541 UTF1Q5T230 341 aa4.48□□□□□ -1.69
PTCD3-205ENST00000464541 DCAF12Q5T6F0 453 aa4.48□□□□□ -1.69
PTCD3-205ENST00000464541 RSBN1Q5VWQ0 802 aaPredicted RBP4.48□□□□□ -1.69
PTCD3-205ENST00000464541 IYDQ6PHW0 289 aa4.48□□□□□ -1.69
PTCD3-205ENST00000464541 ZNF600Q6ZNG1 722 aa4.48□□□□□ -1.69
PTCD3-205ENST00000464541 ZNF584Q8IVC4 421 aa4.48□□□□□ -1.69
PTCD3-205ENST00000464541 FBXW8Q8N3Y1 598 aa4.48□□□□□ -1.69
PTCD3-205ENST00000464541 C10orf53Q8N6V4 93 aa4.48□□□□□ -1.69
PTCD3-205ENST00000464541 LPCAT1Q8NF37 534 aa4.48□□□□□ -1.69
PTCD3-205ENST00000464541 OR4L1Q8NH43 312 aa4.48□□□□□ -1.69
PTCD3-205ENST00000464541 PSMA8Q8TAA3 256 aa4.48□□□□□ -1.69
PTCD3-205ENST00000464541 PTP4A1Q93096 173 aa4.48□□□□□ -1.69
PTCD3-205ENST00000464541 FAM46BQ96A09 425 aa4.48□□□□□ -1.69
PTCD3-205ENST00000464541 TSPAN18Q96SJ8 248 aa4.48□□□□□ -1.69
PTCD3-205ENST00000464541 MRPL9Q9BYD2 267 aaKnown RBP4.48□□□□□ -1.69
PTCD3-205ENST00000464541 SLC26A1Q9H2B4 701 aa4.48□□□□□ -1.69
PTCD3-205ENST00000464541 CXXC4Q9H2H0 198 aa4.48□□□□□ -1.69
PTCD3-205ENST00000464541 Q9HAA7 133 aa4.48□□□□□ -1.69
PTCD3-205ENST00000464541 SNX5Q9Y5X3 404 aa4.48□□□□□ -1.69
PTCD3-205ENST00000464541 IGKV6D-41A0A0C4DH26 115 aa4.47□□□□□ -1.69
PTCD3-205ENST00000464541 YJEFN3A6XGL0 299 aa4.47□□□□□ -1.69
PTCD3-205ENST00000464541 FMO6PO60774 539 aa4.47□□□□□ -1.69
PTCD3-205ENST00000464541 PIGRP01833 764 aa4.47□□□□□ -1.69
PTCD3-205ENST00000464541 FCER2P06734 321 aa4.47□□□□□ -1.69
PTCD3-205ENST00000464541 SFTPBP07988 381 aa4.47□□□□□ -1.69
PTCD3-205ENST00000464541 MBL2P11226 248 aaPredicted RBP4.47□□□□□ -1.69
PTCD3-205ENST00000464541 HSD17B1P14061 328 aa4.47□□□□□ -1.69
PTCD3-205ENST00000464541 FCARP24071 287 aa4.47□□□□□ -1.69
PTCD3-205ENST00000464541 HAGHQ16775 308 aa4.47□□□□□ -1.69
PTCD3-205ENST00000464541 GPR142Q7Z601 462 aa4.47□□□□□ -1.69
PTCD3-205ENST00000464541 PARP8Q8N3A8 854 aa4.47□□□□□ -1.69
PTCD3-205ENST00000464541 ARL10Q8N8L6 244 aa4.47□□□□□ -1.69
PTCD3-205ENST00000464541 DESI2Q9BSY9 194 aa4.47□□□□□ -1.69
PTCD3-205ENST00000464541 OSBPL8Q9BZF1 889 aa4.47□□□□□ -1.69
PTCD3-205ENST00000464541 SLC5A7Q9GZV3 580 aa4.47□□□□□ -1.69
PTCD3-205ENST00000464541 TNFRSF19Q9NS68 423 aa4.47□□□□□ -1.69
PTCD3-205ENST00000464541 ODF2LQ9ULJ1 636 aa4.47□□□□□ -1.69
PTCD3-205ENST00000464541 MRPS2Q9Y399 296 aaKnown RBP4.47□□□□□ -1.69
PTCD3-205ENST00000464541 KLLNB2CW77 178 aa4.46□□□□□ -1.7
PTCD3-205ENST00000464541 SRPX2O60687 465 aaPredicted RBP4.46□□□□□ -1.7
PTCD3-205ENST00000464541 RTN2O75298 545 aa4.46□□□□□ -1.7
PTCD3-205ENST00000464541 HMMRO75330 724 aa4.46□□□□□ -1.7
PTCD3-205ENST00000464541 AKAP3O75969 853 aa4.46□□□□□ -1.7
PTCD3-205ENST00000464541 B4GALT1P15291 398 aa4.46□□□□□ -1.7
PTCD3-205ENST00000464541 FERP16591 822 aa4.46□□□□□ -1.7
PTCD3-205ENST00000464541 CASP3P42574 277 aa4.46□□□□□ -1.7
PTCD3-205ENST00000464541 MSLNQ13421 630 aaPredicted RBP4.46□□□□□ -1.7
PTCD3-205ENST00000464541 GK2Q14410 553 aaPredicted RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms