RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 TRAV17A0A0B4J275 112 aa15.86■□□□□ 0.13
VPS52-215ENST00000464425 SYNDIG1LA6NDD5 238 aa15.86■□□□□ 0.13
VPS52-215ENST00000464425 GABRR3A8MPY1 467 aa15.86■□□□□ 0.13
VPS52-215ENST00000464425 PIP5K1BO14986 540 aa15.86■□□□□ 0.13
VPS52-215ENST00000464425 OR10H2O60403 315 aa15.86■□□□□ 0.13
VPS52-215ENST00000464425 WISP1O95388 367 aa15.86■□□□□ 0.13
VPS52-215ENST00000464425 COX7A2P14406 83 aa15.86■□□□□ 0.13
VPS52-215ENST00000464425 ALOX15P16050 662 aaPredicted RBP15.86■□□□□ 0.13
VPS52-215ENST00000464425 CD96P40200 585 aa15.86■□□□□ 0.13
VPS52-215ENST00000464425 MDH1P40925 334 aaKnown RBP15.86■□□□□ 0.13
VPS52-215ENST00000464425 MLF1P58340 268 aa15.86■□□□□ 0.13
VPS52-215ENST00000464425 TUBA3CQ13748 450 aa15.86■□□□□ 0.13
VPS52-215ENST00000464425 XKR7Q5GH72 579 aa15.86■□□□□ 0.13
VPS52-215ENST00000464425 OR52E8Q6IFG1 317 aa15.86■□□□□ 0.13
VPS52-215ENST00000464425 GALNT18Q6P9A2 607 aa15.86■□□□□ 0.13
VPS52-215ENST00000464425 TUBA3EQ6PEY2 450 aa15.86■□□□□ 0.13
VPS52-215ENST00000464425 DDIASQ8IXT1 998 aa15.86■□□□□ 0.13
VPS52-215ENST00000464425 MORN4Q8NDC4 146 aa15.86■□□□□ 0.13
VPS52-215ENST00000464425 SLC2A12Q8TD20 617 aa15.86■□□□□ 0.13
VPS52-215ENST00000464425 UTP23Q9BRU9 249 aaKnown RBP15.86■□□□□ 0.13
VPS52-215ENST00000464425 LIN28AQ9H9Z2 209 aaKnown RBP15.86■□□□□ 0.13
VPS52-215ENST00000464425 ASF1BQ9NVP2 202 aa15.86■□□□□ 0.13
VPS52-215ENST00000464425 FAM53CQ9NYF3 392 aa15.86■□□□□ 0.13
VPS52-215ENST00000464425 COPG1Q9Y678 874 aaKnown RBP15.86■□□□□ 0.13
VPS52-215ENST00000464425 A0A1W2PS29 197 aa15.85■□□□□ 0.13
VPS52-215ENST00000464425 HDAC3O15379 428 aa15.85■□□□□ 0.13
VPS52-215ENST00000464425 PRKNO60260 465 aaPredicted RBP15.85■□□□□ 0.13
VPS52-215ENST00000464425 GUCY1B2O75343 617 aa15.85■□□□□ 0.13
VPS52-215ENST00000464425 ZFAND5O76080 213 aa15.85■□□□□ 0.13
VPS52-215ENST00000464425 DDAH2O95865 285 aa15.85■□□□□ 0.13
VPS52-215ENST00000464425 PIK3R1P27986 724 aa15.85■□□□□ 0.13
VPS52-215ENST00000464425 RAE1P78406 368 aaKnown RBP15.85■□□□□ 0.13
VPS52-215ENST00000464425 PLIN5Q00G26 463 aa15.85■□□□□ 0.13
VPS52-215ENST00000464425 OC90Q02509 493 aaPredicted RBP15.85■□□□□ 0.13
VPS52-215ENST00000464425 ACSM2AQ08AH3 577 aa15.85■□□□□ 0.13
VPS52-215ENST00000464425 BIKQ13323 160 aa15.85■□□□□ 0.13
VPS52-215ENST00000464425 KIAA0040Q15053 153 aa15.85■□□□□ 0.13
VPS52-215ENST00000464425 ZNF750Q32MQ0 723 aa15.85■□□□□ 0.13
VPS52-215ENST00000464425 ZNF468Q5VIY5 522 aaPredicted RBP15.85■□□□□ 0.13
VPS52-215ENST00000464425 ACSM2BQ68CK6 577 aa15.85■□□□□ 0.13
VPS52-215ENST00000464425 SPINK14Q6IE38 97 aa15.85■□□□□ 0.13
VPS52-215ENST00000464425 C16orf47Q6ZP98 133 aaPredicted RBP15.85■□□□□ 0.13
VPS52-215ENST00000464425 LGI4Q8N135 537 aa15.85■□□□□ 0.13
VPS52-215ENST00000464425 C7orf57Q8NEG2 295 aa15.85■□□□□ 0.13
VPS52-215ENST00000464425 OR2T11Q8NH01 316 aa15.85■□□□□ 0.13
VPS52-215ENST00000464425 SUN3Q8TAQ9 357 aa15.85■□□□□ 0.13
VPS52-215ENST00000464425 SENP5Q96HI0 755 aaPredicted RBP15.85■□□□□ 0.13
VPS52-215ENST00000464425 SIGLEC12Q96PQ1 595 aa15.85■□□□□ 0.13
VPS52-215ENST00000464425 EBPLQ9BY08 206 aa15.85■□□□□ 0.13
VPS52-215ENST00000464425 SLCO1B3Q9NPD5 702 aa15.85■□□□□ 0.13
VPS52-215ENST00000464425 C1orf109Q9NX04 203 aa15.85■□□□□ 0.13
VPS52-215ENST00000464425 NTNG1Q9Y2I2 539 aa15.85■□□□□ 0.13
VPS52-215ENST00000464425 PCDHA9Q9Y5H5 950 aa15.85■□□□□ 0.13
VPS52-215ENST00000464425 PTGDR2Q9Y5Y4 395 aa15.85■□□□□ 0.13
VPS52-215ENST00000464425 CPAMD8Q8IZJ3 1885 aa15.84■□□□□ 0.13
VPS52-215ENST00000464425 GCN1Q92616 2671 aaKnown RBP15.84■□□□□ 0.13
VPS52-215ENST00000464425 PRRC2CQ9Y520 2896 aaKnown RBP15.84■□□□□ 0.13
VPS52-215ENST00000464425 RP1L1Q8IWN7 2480 aaPredicted RBP15.84■□□□□ 0.13
VPS52-215ENST00000464425 GNG14A0A1W2PPG7 69 aa15.84■□□□□ 0.13
VPS52-215ENST00000464425 TRPC5OSA6NMA1 111 aa15.84■□□□□ 0.13
VPS52-215ENST00000464425 HRKO00198 91 aa15.84■□□□□ 0.13
VPS52-215ENST00000464425 LSM1O15116 133 aaKnown RBP15.84■□□□□ 0.13
VPS52-215ENST00000464425 PCDH7O60245 1069 aa15.84■□□□□ 0.13
VPS52-215ENST00000464425 SKAP2O75563 359 aaPredicted RBP15.84■□□□□ 0.13
VPS52-215ENST00000464425 ALDH9A1P49189 494 aa15.84■□□□□ 0.13
VPS52-215ENST00000464425 XKP51811 444 aa15.84■□□□□ 0.13
VPS52-215ENST00000464425 TRA2BP62995 288 aaKnown RBP15.84■□□□□ 0.13
VPS52-215ENST00000464425 GUCY1A3Q02108 690 aa15.84■□□□□ 0.13
VPS52-215ENST00000464425 KCNC4Q03721 635 aa15.84■□□□□ 0.13
VPS52-215ENST00000464425 OR1C1Q15619 314 aa15.84■□□□□ 0.13
VPS52-215ENST00000464425 HSDL2Q6YN16 418 aa15.84■□□□□ 0.13
VPS52-215ENST00000464425 LRRC34Q8IZ02 419 aa15.84■□□□□ 0.13
VPS52-215ENST00000464425 ST13P4Q8IZP2 240 aaPredicted RBP15.84■□□□□ 0.13
VPS52-215ENST00000464425 OR4K14Q8NGD5 310 aa15.84■□□□□ 0.13
VPS52-215ENST00000464425 ZNF721Q8TF20 911 aa15.84■□□□□ 0.13
VPS52-215ENST00000464425 RIT1Q92963 219 aa15.84■□□□□ 0.13
VPS52-215ENST00000464425 PPP3R2Q96LZ3 170 aa15.84■□□□□ 0.13
VPS52-215ENST00000464425 C3orf30Q96M34 536 aa15.84■□□□□ 0.13
VPS52-215ENST00000464425 CNPPD1Q9BV87 410 aa15.84■□□□□ 0.13
VPS52-215ENST00000464425 MEAF6Q9HAF1 191 aa15.84■□□□□ 0.13
VPS52-215ENST00000464425 LRTM1Q9HBL6 345 aa15.84■□□□□ 0.13
VPS52-215ENST00000464425 MCM8Q9UJA3 840 aa15.84■□□□□ 0.13
VPS52-215ENST00000464425 TMED5Q9Y3A6 229 aa15.84■□□□□ 0.13
VPS52-215ENST00000464425 C1orf226A1L170 272 aa15.83■□□□□ 0.12
VPS52-215ENST00000464425 FCHO1O14526 889 aa15.83■□□□□ 0.12
VPS52-215ENST00000464425 DYRK3O43781 588 aa15.83■□□□□ 0.12
VPS52-215ENST00000464425 PRAMEF2O60811 474 aa15.83■□□□□ 0.12
VPS52-215ENST00000464425 VPS4BO75351 444 aa15.83■□□□□ 0.12
VPS52-215ENST00000464425 SEC22BO75396 215 aa15.83■□□□□ 0.12
VPS52-215ENST00000464425 JUNP05412 331 aaKnown RBP15.83■□□□□ 0.12
VPS52-215ENST00000464425 SLC35E2P0CK97 266 aa15.83■□□□□ 0.12
VPS52-215ENST00000464425 TIA1P31483 386 aaKnown RBP eCLIP15.83■□□□□ 0.12
VPS52-215ENST00000464425 GSTM5P46439 218 aa15.83■□□□□ 0.12
VPS52-215ENST00000464425 ZNF267Q14586 743 aaPredicted RBP15.83■□□□□ 0.12
VPS52-215ENST00000464425 NR6A1Q15406 480 aa15.83■□□□□ 0.12
VPS52-215ENST00000464425 PDCD2Q16342 344 aaPredicted RBP15.83■□□□□ 0.12
VPS52-215ENST00000464425 SMU1Q2TAY7 513 aa15.83■□□□□ 0.12
VPS52-215ENST00000464425 ZNF766Q5HY98 468 aa15.83■□□□□ 0.12
VPS52-215ENST00000464425 FAM180BQ6P0A1 224 aa15.83■□□□□ 0.12
VPS52-215ENST00000464425 ATCAYQ86WG3 371 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms