RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 TIFAQ96CG3 184 aa6.85□□□□□ -1.31
CLSTN1-204ENST00000464286 OTUB1Q96FW1 271 aaPredicted RBP6.85□□□□□ -1.31
CLSTN1-204ENST00000464286 KLHDC7BQ96G42 594 aa6.85□□□□□ -1.31
CLSTN1-204ENST00000464286 GPR137Q96N19 417 aa6.85□□□□□ -1.31
CLSTN1-204ENST00000464286 SLC38A2Q96QD8 506 aa6.85□□□□□ -1.31
CLSTN1-204ENST00000464286 FYTTD1Q96QD9 318 aaKnown RBP6.85□□□□□ -1.31
CLSTN1-204ENST00000464286 OR5M11Q96RB7 305 aa6.85□□□□□ -1.31
CLSTN1-204ENST00000464286 ZNF607Q96SK3 696 aa6.85□□□□□ -1.31
CLSTN1-204ENST00000464286 COPS8Q99627 209 aa6.85□□□□□ -1.31
CLSTN1-204ENST00000464286 TMEM43Q9BTV4 400 aa6.85□□□□□ -1.31
CLSTN1-204ENST00000464286 ZNF408Q9H9D4 720 aa6.85□□□□□ -1.31
CLSTN1-204ENST00000464286 AMBNQ9NP70 447 aa6.85□□□□□ -1.31
CLSTN1-204ENST00000464286 FGF20Q9NP95 211 aaPredicted RBP6.85□□□□□ -1.31
CLSTN1-204ENST00000464286 ADARB2Q9NS39 739 aaKnown RBP6.85□□□□□ -1.31
CLSTN1-204ENST00000464286 SLC6A13Q9NSD5 602 aa6.85□□□□□ -1.31
CLSTN1-204ENST00000464286 FARSBQ9NSD9 589 aaKnown RBP6.85□□□□□ -1.31
CLSTN1-204ENST00000464286 ACER3Q9NUN7 267 aa6.85□□□□□ -1.31
CLSTN1-204ENST00000464286 TMEM39AQ9NV64 488 aa6.85□□□□□ -1.31
CLSTN1-204ENST00000464286 TMLHEQ9NVH6 421 aa6.85□□□□□ -1.31
CLSTN1-204ENST00000464286 MRPS18AQ9NVS2 196 aaKnown RBP6.85□□□□□ -1.31
CLSTN1-204ENST00000464286 SPATA6Q9NWH7 488 aaPredicted RBP6.85□□□□□ -1.31
CLSTN1-204ENST00000464286 TXNL4BQ9NX01 149 aaKnown RBP6.85□□□□□ -1.31
CLSTN1-204ENST00000464286 TRPM5Q9NZQ8 1165 aa6.85□□□□□ -1.31
CLSTN1-204ENST00000464286 AKAP7Q9P0M2 348 aaPredicted RBP6.85□□□□□ -1.31
CLSTN1-204ENST00000464286 AASSQ9UDR5 926 aa6.85□□□□□ -1.31
CLSTN1-204ENST00000464286 UBQLN2Q9UHD9 624 aa6.85□□□□□ -1.31
CLSTN1-204ENST00000464286 MUTYHQ9UIF7 546 aa6.85□□□□□ -1.31
CLSTN1-204ENST00000464286 KCND3Q9UK17 655 aa6.85□□□□□ -1.31
CLSTN1-204ENST00000464286 FKBP7Q9Y680 259 aa6.85□□□□□ -1.31
CLSTN1-204ENST00000464286 CFAP20Q9Y6A4 193 aaKnown RBP6.85□□□□□ -1.31
CLSTN1-204ENST00000464286 CSNK1G3Q9Y6M4 447 aa6.85□□□□□ -1.31
CLSTN1-204ENST00000464286 UTRNP46939 3433 aa6.85□□□□□ -1.31
CLSTN1-204ENST00000464286 A0A0U1RQF3 1178 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 A6NL46 340 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 WASHC1A8K0Z3 465 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 A8MV72 311 aaPredicted RBP6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 LEUTXA8MZ59 168 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 H7C4K7 107 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 CBX4O00257 560 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 CASKO14936 926 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 HYAL3O43820 417 aaPredicted RBP6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 AKAP8O43823 692 aaKnown RBP6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 FZD6O60353 706 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 ADAM11O75078 769 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 TMEM127O75204 238 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 ENTPD6O75354 484 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 TNFRSF21O75509 655 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 LRATO95237 230 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 WDPCPO95876 746 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 TGM6O95932 706 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 H1F0P07305 194 aaKnown RBP6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 ANXA4P09525 319 aaPredicted RBP6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 PRSS56P0CW18 603 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 HLA-EP13747 358 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 CD53P19397 219 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 TNNI3P19429 210 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 ETV3P41162 512 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 STK19P49842 368 aaPredicted RBP6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 CDKN1CP49918 316 aaPredicted RBP6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 SMSP52788 366 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 PER3P56645 1201 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 WNT3P56703 355 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 ZNF91Q05481 1191 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 BCL2L1Q07817 233 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 CNTN1Q12860 1018 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 ELAVL2Q12926 359 aaKnown RBP6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 CHIT1Q13231 466 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 CAMK1Q14012 370 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 IL18Q14116 193 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 GRK1Q15835 563 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 DGKKQ5KSL6 1271 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 REEP3Q6NUK4 255 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 ANKRD54Q6NXT1 300 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 CDC73Q6P1J9 531 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 ANGPTL8Q6UXH0 198 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 CD300LDQ6UXZ3 194 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 SLC36A4Q6YBV0 504 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 QSOX2Q6ZRP7 698 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 DEFB132Q7Z7B7 95 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 TRIM48Q8IWZ4 208 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 SDR16C5Q8N3Y7 309 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 TTC16Q8NEE8 873 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 OR7G3Q8NG95 312 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 OR8K5Q8NH50 307 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 LHFPL5Q8TAF8 219 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 SMG7Q92540 1137 aaKnown RBP6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 NACC2Q96BF6 587 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 PPCDCQ96CD2 204 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 C1GALT1C1Q96EU7 318 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 CDCA5Q96FF9 252 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 APIPQ96GX9 242 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 CAMK1GQ96NX5 476 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 ERMAPQ96PL5 475 aaPredicted RBP6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 FAM193BQ96PV7 902 aaPredicted RBP6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 SEPT5Q99719 369 aaPredicted RBP6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 MYOCQ99972 504 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 C17orf62Q9BQA9 187 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 NLNQ9BYT8 704 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 BTBD1Q9H0C5 482 aa6.84□□□□□ -1.31
CLSTN1-204ENST00000464286 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms