RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 CD63P08962 238 aa13.44□□□□□ -0.26
COL6A1-202ENST00000463060 IFI6P09912 130 aa13.44□□□□□ -0.26
COL6A1-202ENST00000463060 CCNYL3P0C7X3 344 aa13.44□□□□□ -0.26
COL6A1-202ENST00000463060 RBMS1P29558 406 aaKnown RBP13.44□□□□□ -0.26
COL6A1-202ENST00000463060 GALNSP34059 522 aa13.44□□□□□ -0.26
COL6A1-202ENST00000463060 STAT5AP42229 794 aa13.44□□□□□ -0.26
COL6A1-202ENST00000463060 MANFP55145 182 aaKnown RBP13.44□□□□□ -0.26
COL6A1-202ENST00000463060 SLC13A2Q13183 592 aa13.44□□□□□ -0.26
COL6A1-202ENST00000463060 SERTAD2Q14140 314 aa13.44□□□□□ -0.26
COL6A1-202ENST00000463060 NCF4Q15080 339 aa13.44□□□□□ -0.26
COL6A1-202ENST00000463060 ZSCAN26Q16670 478 aa13.44□□□□□ -0.26
COL6A1-202ENST00000463060 TMEM205Q6UW68 189 aa13.44□□□□□ -0.26
COL6A1-202ENST00000463060 DGAT2L6Q6ZPD8 337 aa13.44□□□□□ -0.26
COL6A1-202ENST00000463060 RINLQ6ZS11 566 aa13.44□□□□□ -0.26
COL6A1-202ENST00000463060 NLGN4XQ8N0W4 816 aa13.44□□□□□ -0.26
COL6A1-202ENST00000463060 PCYOX1LQ8NBM8 494 aa13.44□□□□□ -0.26
COL6A1-202ENST00000463060 C7orf57Q8NEG2 295 aa13.44□□□□□ -0.26
COL6A1-202ENST00000463060 NLGN4YQ8NFZ3 816 aaPredicted RBP13.44□□□□□ -0.26
COL6A1-202ENST00000463060 CT55Q8WUE5 264 aa13.44□□□□□ -0.26
COL6A1-202ENST00000463060 TSLPQ969D9 159 aa13.44□□□□□ -0.26
COL6A1-202ENST00000463060 NKD1Q969G9 470 aa13.44□□□□□ -0.26
COL6A1-202ENST00000463060 ROPN1LQ96C74 230 aa13.44□□□□□ -0.26
COL6A1-202ENST00000463060 CTHRC1Q96CG8 243 aa13.44□□□□□ -0.26
COL6A1-202ENST00000463060 PTCHD1Q96NR3 888 aa13.44□□□□□ -0.26
COL6A1-202ENST00000463060 C1orf21Q9H246 121 aa13.44□□□□□ -0.26
COL6A1-202ENST00000463060 CXorf36Q9H7Y0 433 aa13.44□□□□□ -0.26
COL6A1-202ENST00000463060 TAS2R9Q9NYW1 312 aa13.44□□□□□ -0.26
COL6A1-202ENST00000463060 NTMQ9P121 344 aa13.44□□□□□ -0.26
COL6A1-202ENST00000463060 MKL2Q9ULH7 1088 aa13.44□□□□□ -0.26
COL6A1-202ENST00000463060 ENTPD4Q9Y227 616 aa13.44□□□□□ -0.26
COL6A1-202ENST00000463060 AHCTF1Q8WYP5 2266 aa13.43□□□□□ -0.26
COL6A1-202ENST00000463060 MYOCOSA0A1B0GUC4 107 aa13.43□□□□□ -0.26
COL6A1-202ENST00000463060 B2RBV5 119 aa13.43□□□□□ -0.26
COL6A1-202ENST00000463060 IDSB3KWA1 339 aa13.43□□□□□ -0.26
COL6A1-202ENST00000463060 STMND1H3BQB6 276 aa13.43□□□□□ -0.26
COL6A1-202ENST00000463060 PLOD2O00469 737 aa13.43□□□□□ -0.26
COL6A1-202ENST00000463060 RFXANKO14593 260 aa13.43□□□□□ -0.26
COL6A1-202ENST00000463060 RAD1O60671 282 aa13.43□□□□□ -0.26
COL6A1-202ENST00000463060 ATP5HO75947 161 aa13.43□□□□□ -0.26
COL6A1-202ENST00000463060 UMODP07911 640 aa13.43□□□□□ -0.26
COL6A1-202ENST00000463060 S1PR1P21453 382 aa13.43□□□□□ -0.26
COL6A1-202ENST00000463060 NTSP30990 170 aa13.43□□□□□ -0.26
COL6A1-202ENST00000463060 STT3AP46977 705 aa13.43□□□□□ -0.26
COL6A1-202ENST00000463060 NCBP2P52298 156 aaKnown RBP eCLIP13.43□□□□□ -0.26
COL6A1-202ENST00000463060 PLIN5Q00G26 463 aa13.43□□□□□ -0.26
COL6A1-202ENST00000463060 STX4Q12846 297 aa13.43□□□□□ -0.26
COL6A1-202ENST00000463060 MAP4K2Q12851 820 aa13.43□□□□□ -0.26
COL6A1-202ENST00000463060 PRICKLE4Q2TBC4 344 aa13.43□□□□□ -0.26
COL6A1-202ENST00000463060 TRMT5Q32P41 509 aaKnown RBP13.43□□□□□ -0.26
COL6A1-202ENST00000463060 MMEL1Q495T6 779 aa13.43□□□□□ -0.26
COL6A1-202ENST00000463060 MINDY4Q4G0A6 757 aa13.43□□□□□ -0.26
COL6A1-202ENST00000463060 FHL5Q5TD97 284 aa13.43□□□□□ -0.26
COL6A1-202ENST00000463060 SHISA6Q6ZSJ9 500 aa13.43□□□□□ -0.26
COL6A1-202ENST00000463060 CCDC121Q6ZUS5 278 aa13.43□□□□□ -0.26
COL6A1-202ENST00000463060 ST13P4Q8IZP2 240 aaPredicted RBP13.43□□□□□ -0.26
COL6A1-202ENST00000463060 RBM15BQ8NDT2 890 aaKnown RBP13.43□□□□□ -0.26
COL6A1-202ENST00000463060 ZNF675Q8TD23 568 aa13.43□□□□□ -0.26
COL6A1-202ENST00000463060 LRRC58Q96CX6 371 aa13.43□□□□□ -0.26
COL6A1-202ENST00000463060 SOX17Q9H6I2 414 aaPredicted RBP13.43□□□□□ -0.26
COL6A1-202ENST00000463060 EPS8L2Q9H6S3 715 aa13.43□□□□□ -0.26
COL6A1-202ENST00000463060 CXorf21Q9HAI6 301 aa13.43□□□□□ -0.26
COL6A1-202ENST00000463060 GIMAP4Q9NUV9 329 aa13.43□□□□□ -0.26
COL6A1-202ENST00000463060 VAPAQ9P0L0 249 aa13.43□□□□□ -0.26
COL6A1-202ENST00000463060 GPN3Q9UHW5 284 aaPredicted RBP13.43□□□□□ -0.26
COL6A1-202ENST00000463060 ZNF639Q9UID6 485 aa13.43□□□□□ -0.26
COL6A1-202ENST00000463060 FARSAQ9Y285 508 aaKnown RBP13.43□□□□□ -0.26
COL6A1-202ENST00000463060 PCDHB14Q9Y5E9 798 aa13.43□□□□□ -0.26
COL6A1-202ENST00000463060 LOC101059948A0A1B0GTJ6 334 aa13.42□□□□□ -0.26
COL6A1-202ENST00000463060 C9J4A7 227 aa13.42□□□□□ -0.26
COL6A1-202ENST00000463060 BRINP1O60477 761 aa13.42□□□□□ -0.26
COL6A1-202ENST00000463060 HNRNPCL1O60812 293 aaKnown RBP13.42□□□□□ -0.26
COL6A1-202ENST00000463060 KCNH1O95259 989 aa13.42□□□□□ -0.26
COL6A1-202ENST00000463060 CPSF4O95639 269 aaKnown RBP13.42□□□□□ -0.26
COL6A1-202ENST00000463060 C1QCP02747 245 aa13.42□□□□□ -0.26
COL6A1-202ENST00000463060 GSNP06396 782 aa13.42□□□□□ -0.26
COL6A1-202ENST00000463060 KRT16P08779 473 aa13.42□□□□□ -0.26
COL6A1-202ENST00000463060 CT62P0C5K7 136 aa13.42□□□□□ -0.26
COL6A1-202ENST00000463060 ATXN8OSP0DMR3 200 aa13.42□□□□□ -0.26
COL6A1-202ENST00000463060 TCN2P20062 427 aa13.42□□□□□ -0.26
COL6A1-202ENST00000463060 F8A1P23610 371 aa13.42□□□□□ -0.26
COL6A1-202ENST00000463060 PTGER1P34995 402 aa13.42□□□□□ -0.26
COL6A1-202ENST00000463060 ID4P47928 161 aa13.42□□□□□ -0.26
COL6A1-202ENST00000463060 CDK9P50750 372 aaKnown RBP13.42□□□□□ -0.26
COL6A1-202ENST00000463060 EMP2P54851 167 aa13.42□□□□□ -0.26
COL6A1-202ENST00000463060 NCALDP61601 193 aa13.42□□□□□ -0.26
COL6A1-202ENST00000463060 FOXC1Q12948 553 aa13.42□□□□□ -0.26
COL6A1-202ENST00000463060 NFYCQ13952 458 aa13.42□□□□□ -0.26
COL6A1-202ENST00000463060 LTB4RQ15722 352 aa13.42□□□□□ -0.26
COL6A1-202ENST00000463060 NSDHLQ15738 373 aa13.42□□□□□ -0.26
COL6A1-202ENST00000463060 GTDC1Q4AE62 458 aa13.42□□□□□ -0.26
COL6A1-202ENST00000463060 RUNDC3AQ59EK9 446 aa13.42□□□□□ -0.26
COL6A1-202ENST00000463060 ZNF628Q5EBL2 1059 aa13.42□□□□□ -0.26
COL6A1-202ENST00000463060 TMEM64Q6YI46 380 aa13.42□□□□□ -0.26
COL6A1-202ENST00000463060 GPR155Q7Z3F1 870 aa13.42□□□□□ -0.26
COL6A1-202ENST00000463060 DHDDSQ86SQ9 333 aa13.42□□□□□ -0.26
COL6A1-202ENST00000463060 PRSS58Q8IYP2 241 aa13.42□□□□□ -0.26
COL6A1-202ENST00000463060 ENDOVQ8N8Q3 282 aaKnown RBP13.42□□□□□ -0.26
COL6A1-202ENST00000463060 OR2Y1Q8NGV0 311 aa13.42□□□□□ -0.26
COL6A1-202ENST00000463060 ZFP28Q8NHY6 868 aa13.42□□□□□ -0.26
COL6A1-202ENST00000463060 PTPMT1Q8WUK0 201 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms