RNA–Protein interactions for RNA: ENST00000462268.1

SYN3-207, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-207ENST00000462268 CCDC153Q494R4 210 aa8.17□□□□□ -1.1
SYN3-207ENST00000462268 UNC50Q53HI1 259 aa8.17□□□□□ -1.1
SYN3-207ENST00000462268 SWT1Q5T5J6 900 aaKnown RBP8.17□□□□□ -1.1
SYN3-207ENST00000462268 NDUFAF5Q5TEU4 345 aa8.17□□□□□ -1.1
SYN3-207ENST00000462268 IL20RBQ6UXL0 311 aa8.17□□□□□ -1.1
SYN3-207ENST00000462268 RNF111Q6ZNA4 994 aa8.17□□□□□ -1.1
SYN3-207ENST00000462268 C16orf47Q6ZP98 133 aaPredicted RBP8.17□□□□□ -1.1
SYN3-207ENST00000462268 Q6ZPB1 254 aaPredicted RBP8.17□□□□□ -1.1
SYN3-207ENST00000462268 RGS9BPQ6ZS82 235 aa8.17□□□□□ -1.1
SYN3-207ENST00000462268 MDGA2Q7Z553 956 aa8.17□□□□□ -1.1
SYN3-207ENST00000462268 SPPL2CQ8IUH8 684 aa8.17□□□□□ -1.1
SYN3-207ENST00000462268 GALNT12Q8IXK2 581 aa8.17□□□□□ -1.1
SYN3-207ENST00000462268 C9orf40Q8IXQ3 194 aa8.17□□□□□ -1.1
SYN3-207ENST00000462268 DND1Q8IYX4 353 aaKnown RBP8.17□□□□□ -1.1
SYN3-207ENST00000462268 SLC15A4Q8N697 577 aa8.17□□□□□ -1.1
SYN3-207ENST00000462268 ZNF321PQ8N8H1 164 aa8.17□□□□□ -1.1
SYN3-207ENST00000462268 CDYL2Q8N8U2 506 aa8.17□□□□□ -1.1
SYN3-207ENST00000462268 GBP7Q8N8V2 638 aaPredicted RBP8.17□□□□□ -1.1
SYN3-207ENST00000462268 ZFP62Q8NB50 900 aaPredicted RBP8.17□□□□□ -1.1
SYN3-207ENST00000462268 OR4K14Q8NGD5 310 aa8.17□□□□□ -1.1
SYN3-207ENST00000462268 C16orf52Q8NHV5 167 aa8.17□□□□□ -1.1
SYN3-207ENST00000462268 RIT1Q92963 219 aa8.17□□□□□ -1.1
SYN3-207ENST00000462268 PPWD1Q96BP3 646 aaKnown RBP8.17□□□□□ -1.1
SYN3-207ENST00000462268 FAIM2Q9BWQ8 316 aa8.17□□□□□ -1.1
SYN3-207ENST00000462268 LIN28AQ9H9Z2 209 aaKnown RBP8.17□□□□□ -1.1
SYN3-207ENST00000462268 TEX10Q9NXF1 929 aaPredicted RBP8.17□□□□□ -1.1
SYN3-207ENST00000462268 VPS29Q9UBQ0 182 aa8.17□□□□□ -1.1
SYN3-207ENST00000462268 SH3BGRL2Q9UJC5 107 aa8.17□□□□□ -1.1
SYN3-207ENST00000462268 MID2Q9UJV3 735 aa8.17□□□□□ -1.1
SYN3-207ENST00000462268 ERVK-19Q9WJR5 959 aa8.17□□□□□ -1.1
SYN3-207ENST00000462268 DOCK10Q96BY6 2186 aa8.17□□□□□ -1.1
SYN3-207ENST00000462268 DOPEY1Q5JWR5 2465 aa8.17□□□□□ -1.1
SYN3-207ENST00000462268 USP9YO00507 2555 aaPredicted RBP8.16□□□□□ -1.1
SYN3-207ENST00000462268 A0A1B0GTL3 188 aa8.16□□□□□ -1.1
SYN3-207ENST00000462268 C1orf226A1L170 272 aa8.16□□□□□ -1.1
SYN3-207ENST00000462268 SMIM23A6NLE4 172 aa8.16□□□□□ -1.1
SYN3-207ENST00000462268 MANBAO00462 879 aa8.16□□□□□ -1.1
SYN3-207ENST00000462268 PPP6CO00743 305 aa8.16□□□□□ -1.1
SYN3-207ENST00000462268 PRRG2O14669 202 aa8.16□□□□□ -1.1
SYN3-207ENST00000462268 ULK1O75385 1050 aa8.16□□□□□ -1.1
SYN3-207ENST00000462268 ESRRBO95718 433 aa8.16□□□□□ -1.1
SYN3-207ENST00000462268 CLDN1O95832 211 aa8.16□□□□□ -1.1
SYN3-207ENST00000462268 SHBGP04278 402 aa8.16□□□□□ -1.1
SYN3-207ENST00000462268 P04436 131 aa8.16□□□□□ -1.1
SYN3-207ENST00000462268 ESRRAP11474 423 aaPredicted RBP8.16□□□□□ -1.1
SYN3-207ENST00000462268 DEKP35659 375 aaKnown RBP8.16□□□□□ -1.1
SYN3-207ENST00000462268 SLCO1A2P46721 670 aa8.16□□□□□ -1.1
SYN3-207ENST00000462268 TRA2BP62995 288 aaKnown RBP8.16□□□□□ -1.1
SYN3-207ENST00000462268 PLGLB1Q02325 96 aa8.16□□□□□ -1.1
SYN3-207ENST00000462268 GALNT1Q10472 559 aaPredicted RBP8.16□□□□□ -1.1
SYN3-207ENST00000462268 ASPHQ12797 758 aa8.16□□□□□ -1.1
SYN3-207ENST00000462268 SPTAN1Q13813 2472 aaKnown RBP8.16□□□□□ -1.1
SYN3-207ENST00000462268 ZNF267Q14586 743 aaPredicted RBP8.16□□□□□ -1.1
SYN3-207ENST00000462268 EBPQ15125 230 aaKnown RBP8.16□□□□□ -1.1
SYN3-207ENST00000462268 C3AR1Q16581 482 aa8.16□□□□□ -1.1
SYN3-207ENST00000462268 SPIN4Q56A73 249 aa8.16□□□□□ -1.1
SYN3-207ENST00000462268 PIGGQ5H8A4 983 aa8.16□□□□□ -1.1
SYN3-207ENST00000462268 LCE2AQ5TA79 106 aaPredicted RBP8.16□□□□□ -1.1
SYN3-207ENST00000462268 SLC48A1Q6P1K1 146 aa8.16□□□□□ -1.1
SYN3-207ENST00000462268 PAOXQ6QHF9 649 aa8.16□□□□□ -1.1
SYN3-207ENST00000462268 ZYG11AQ6WRX3 759 aa8.16□□□□□ -1.1
SYN3-207ENST00000462268 SLC22A16Q86VW1 577 aa8.16□□□□□ -1.1
SYN3-207ENST00000462268 TAGAPQ8N103 731 aa8.16□□□□□ -1.1
SYN3-207ENST00000462268 ZNF808Q8N4W9 903 aaPredicted RBP8.16□□□□□ -1.1
SYN3-207ENST00000462268 RDH11Q8TC12 318 aa8.16□□□□□ -1.1
SYN3-207ENST00000462268 METTL6Q8TCB7 284 aa8.16□□□□□ -1.1
SYN3-207ENST00000462268 CCDC120Q96HB5 630 aa8.16□□□□□ -1.1
SYN3-207ENST00000462268 GAL3ST4Q96RP7 486 aa8.16□□□□□ -1.1
SYN3-207ENST00000462268 FAM173AQ9BQD7 235 aa8.16□□□□□ -1.1
SYN3-207ENST00000462268 WWTR1Q9GZV5 400 aa8.16□□□□□ -1.1
SYN3-207ENST00000462268 CXorf21Q9HAI6 301 aa8.16□□□□□ -1.1
SYN3-207ENST00000462268 FARSBQ9NSD9 589 aaKnown RBP8.16□□□□□ -1.1
SYN3-207ENST00000462268 SACM1LQ9NTJ5 587 aa8.16□□□□□ -1.1
SYN3-207ENST00000462268 MCM8Q9UJA3 840 aa8.16□□□□□ -1.1
SYN3-207ENST00000462268 ZNF225Q9UK10 706 aa8.16□□□□□ -1.1
SYN3-207ENST00000462268 PSME2Q9UL46 239 aa8.16□□□□□ -1.1
SYN3-207ENST00000462268 GRID1Q9ULK0 1009 aa8.16□□□□□ -1.1
SYN3-207ENST00000462268 ZNF835Q9Y2P0 537 aa8.16□□□□□ -1.1
SYN3-207ENST00000462268 PCDHA9Q9Y5H5 950 aa8.16□□□□□ -1.1
SYN3-207ENST00000462268 SCN3AQ9NY46 2000 aa8.15□□□□□ -1.1
SYN3-207ENST00000462268 CPAMD8Q8IZJ3 1885 aa8.15□□□□□ -1.1
SYN3-207ENST00000462268 A0A1W2PPM1 405 aa8.15□□□□□ -1.1
SYN3-207ENST00000462268 CAPN14A8MX76 684 aa8.15□□□□□ -1.1
SYN3-207ENST00000462268 HRKO00198 91 aa8.15□□□□□ -1.1
SYN3-207ENST00000462268 COPEO14579 308 aa8.15□□□□□ -1.1
SYN3-207ENST00000462268 PGRMC2O15173 223 aa8.15□□□□□ -1.1
SYN3-207ENST00000462268 HS6ST1O60243 411 aa8.15□□□□□ -1.1
SYN3-207ENST00000462268 CDC40O60508 579 aaKnown RBP eCLIP8.15□□□□□ -1.1
SYN3-207ENST00000462268 CRCPO75575 148 aa8.15□□□□□ -1.1
SYN3-207ENST00000462268 PROCP04070 461 aa8.15□□□□□ -1.1
SYN3-207ENST00000462268 CPMP14384 443 aa8.15□□□□□ -1.1
SYN3-207ENST00000462268 PORP16435 677 aaPredicted RBP8.15□□□□□ -1.1
SYN3-207ENST00000462268 CNR1P21554 472 aa8.15□□□□□ -1.1
SYN3-207ENST00000462268 NT5EP21589 574 aa8.15□□□□□ -1.1
SYN3-207ENST00000462268 SERPINB3P29508 390 aa8.15□□□□□ -1.1
SYN3-207ENST00000462268 CRHR1P34998 444 aa8.15□□□□□ -1.1
SYN3-207ENST00000462268 RFC3P40938 356 aa8.15□□□□□ -1.1
SYN3-207ENST00000462268 GSTM5P46439 218 aa8.15□□□□□ -1.1
SYN3-207ENST00000462268 TMED10P49755 219 aaKnown RBP8.15□□□□□ -1.1
SYN3-207ENST00000462268 XKP51811 444 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms