RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 WASHC1A8K0Z3 465 aa14.28□□□□□ -0.12
VARS-219ENST00000461328 NPIPA5E9PKD4 350 aa14.28□□□□□ -0.12
VARS-219ENST00000461328 H3BQF6 201 aa14.28□□□□□ -0.12
VARS-219ENST00000461328 PGRMC2O15173 223 aa14.28□□□□□ -0.12
VARS-219ENST00000461328 SPAG7O75391 227 aa14.28□□□□□ -0.12
VARS-219ENST00000461328 CHN1P15882 459 aa14.28□□□□□ -0.12
VARS-219ENST00000461328 DEKP35659 375 aaKnown RBP14.28□□□□□ -0.12
VARS-219ENST00000461328 ALDH9A1P49189 494 aa14.28□□□□□ -0.12
VARS-219ENST00000461328 ERVK-8P63133 956 aa14.28□□□□□ -0.12
VARS-219ENST00000461328 HMGCS1Q01581 520 aa14.28□□□□□ -0.12
VARS-219ENST00000461328 ACSM2AQ08AH3 577 aa14.28□□□□□ -0.12
VARS-219ENST00000461328 TBL3Q12788 808 aaKnown RBP14.28□□□□□ -0.12
VARS-219ENST00000461328 ASPHQ12797 758 aa14.28□□□□□ -0.12
VARS-219ENST00000461328 ZNF267Q14586 743 aaPredicted RBP14.28□□□□□ -0.12
VARS-219ENST00000461328 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.28□□□□□ -0.12
VARS-219ENST00000461328 ACSM2BQ68CK6 577 aa14.28□□□□□ -0.12
VARS-219ENST00000461328 ZNF227Q86WZ6 799 aa14.28□□□□□ -0.12
VARS-219ENST00000461328 ZGRF1Q86YA3 2104 aa14.28□□□□□ -0.12
VARS-219ENST00000461328 C10orf107Q8IVU9 208 aa14.28□□□□□ -0.12
VARS-219ENST00000461328 MREGQ8N565 214 aa14.28□□□□□ -0.12
VARS-219ENST00000461328 OR4K14Q8NGD5 310 aa14.28□□□□□ -0.12
VARS-219ENST00000461328 ZNF721Q8TF20 911 aa14.28□□□□□ -0.12
VARS-219ENST00000461328 UCN3Q969E3 161 aa14.28□□□□□ -0.12
VARS-219ENST00000461328 RELTQ969Z4 430 aa14.28□□□□□ -0.12
VARS-219ENST00000461328 SENP5Q96HI0 755 aaPredicted RBP14.28□□□□□ -0.12
VARS-219ENST00000461328 FBXL20Q96IG2 436 aa14.28□□□□□ -0.12
VARS-219ENST00000461328 MAGED4Q96JG8 741 aa14.28□□□□□ -0.12
VARS-219ENST00000461328 GPR137Q96N19 417 aa14.28□□□□□ -0.12
VARS-219ENST00000461328 GAL3ST4Q96RP7 486 aa14.28□□□□□ -0.12
VARS-219ENST00000461328 SHCBP1LQ9BZQ2 653 aa14.28□□□□□ -0.12
VARS-219ENST00000461328 OXSMQ9NWU1 459 aa14.28□□□□□ -0.12
VARS-219ENST00000461328 MKS1Q9NXB0 559 aa14.28□□□□□ -0.12
VARS-219ENST00000461328 MYOTQ9UBF9 498 aa14.28□□□□□ -0.12
VARS-219ENST00000461328 NPIPA1Q9UND3 350 aa14.28□□□□□ -0.12
VARS-219ENST00000461328 ERVK-19Q9WJR5 959 aa14.28□□□□□ -0.12
VARS-219ENST00000461328 KLF13Q9Y2Y9 288 aaPredicted RBP14.28□□□□□ -0.12
VARS-219ENST00000461328 DOPEY1Q5JWR5 2465 aa14.27□□□□□ -0.12
VARS-219ENST00000461328 GOLGA6L10A6NI86 522 aa14.27□□□□□ -0.13
VARS-219ENST00000461328 UBFD1O14562 309 aaKnown RBP14.27□□□□□ -0.13
VARS-219ENST00000461328 PCDH7O60245 1069 aa14.27□□□□□ -0.13
VARS-219ENST00000461328 ZG16O60844 167 aa14.27□□□□□ -0.13
VARS-219ENST00000461328 ZNF24P17028 368 aa14.27□□□□□ -0.13
VARS-219ENST00000461328 HK2P52789 917 aa14.27□□□□□ -0.13
VARS-219ENST00000461328 CASP6P55212 293 aa14.27□□□□□ -0.13
VARS-219ENST00000461328 RNF4P78317 190 aa14.27□□□□□ -0.13
VARS-219ENST00000461328 BTKQ06187 659 aa14.27□□□□□ -0.13
VARS-219ENST00000461328 PCLAFQ15004 111 aa14.27□□□□□ -0.13
VARS-219ENST00000461328 KRTCAP3Q53RY4 240 aa14.27□□□□□ -0.13
VARS-219ENST00000461328 SPIN4Q56A73 249 aa14.27□□□□□ -0.13
VARS-219ENST00000461328 SPDYAQ5MJ70 313 aa14.27□□□□□ -0.13
VARS-219ENST00000461328 RNF111Q6ZNA4 994 aa14.27□□□□□ -0.13
VARS-219ENST00000461328 DGAT2L6Q6ZPD8 337 aa14.27□□□□□ -0.13
VARS-219ENST00000461328 SLC29A4Q7RTT9 530 aa14.27□□□□□ -0.13
VARS-219ENST00000461328 GALNT12Q8IXK2 581 aa14.27□□□□□ -0.13
VARS-219ENST00000461328 CPSF7Q8N684 471 aaKnown RBP14.27□□□□□ -0.13
VARS-219ENST00000461328 BANPQ8N9N5 519 aa14.27□□□□□ -0.13
VARS-219ENST00000461328 OR8K3Q8NH51 312 aa14.27□□□□□ -0.13
VARS-219ENST00000461328 FAM111AQ96PZ2 611 aa14.27□□□□□ -0.13
VARS-219ENST00000461328 RASL10BQ96S79 203 aa14.27□□□□□ -0.13
VARS-219ENST00000461328 EBPLQ9BY08 206 aa14.27□□□□□ -0.13
VARS-219ENST00000461328 TIMMDC1Q9NPL8 285 aa14.27□□□□□ -0.13
VARS-219ENST00000461328 PFDN4Q9NQP4 134 aa14.27□□□□□ -0.13
VARS-219ENST00000461328 SUCOQ9UBS9 1254 aaKnown RBP14.27□□□□□ -0.13
VARS-219ENST00000461328 MCM8Q9UJA3 840 aa14.27□□□□□ -0.13
VARS-219ENST00000461328 SH3BGRL2Q9UJC5 107 aa14.27□□□□□ -0.13
VARS-219ENST00000461328 PLLPQ9Y342 182 aa14.27□□□□□ -0.13
VARS-219ENST00000461328 PCDHA9Q9Y5H5 950 aa14.27□□□□□ -0.13
VARS-219ENST00000461328 MAST4O15021 2626 aa14.26□□□□□ -0.13
VARS-219ENST00000461328 C1orf226A1L170 272 aa14.26□□□□□ -0.13
VARS-219ENST00000461328 KLRC4-KLRK1H3BQV0 150 aa14.26□□□□□ -0.13
VARS-219ENST00000461328 HRKO00198 91 aa14.26□□□□□ -0.13
VARS-219ENST00000461328 CCL21O00585 134 aa14.26□□□□□ -0.13
VARS-219ENST00000461328 SLC19A2O60779 497 aa14.26□□□□□ -0.13
VARS-219ENST00000461328 ERAL1O75616 437 aaKnown RBP14.26□□□□□ -0.13
VARS-219ENST00000461328 WISP2O76076 250 aa14.26□□□□□ -0.13
VARS-219ENST00000461328 TUBBP07437 444 aa14.26□□□□□ -0.13
VARS-219ENST00000461328 SLC35E2P0CK97 266 aa14.26□□□□□ -0.13
VARS-219ENST00000461328 NT5EP21589 574 aa14.26□□□□□ -0.13
VARS-219ENST00000461328 COL8A1P27658 744 aa14.26□□□□□ -0.13
VARS-219ENST00000461328 SOX3P41225 446 aa14.26□□□□□ -0.13
VARS-219ENST00000461328 XKP51811 444 aa14.26□□□□□ -0.13
VARS-219ENST00000461328 FOXA1P55317 472 aa14.26□□□□□ -0.13
VARS-219ENST00000461328 TRA2BP62995 288 aaKnown RBP14.26□□□□□ -0.13
VARS-219ENST00000461328 SPRED3Q2MJR0 410 aa14.26□□□□□ -0.13
VARS-219ENST00000461328 IL20RBQ6UXL0 311 aa14.26□□□□□ -0.13
VARS-219ENST00000461328 C9orf40Q8IXQ3 194 aa14.26□□□□□ -0.13
VARS-219ENST00000461328 GPALPP1Q8IXQ4 340 aa14.26□□□□□ -0.13
VARS-219ENST00000461328 MMP21Q8N119 569 aa14.26□□□□□ -0.13
VARS-219ENST00000461328 CDC26Q8NHZ8 85 aa14.26□□□□□ -0.13
VARS-219ENST00000461328 CHTF18Q8WVB6 975 aa14.26□□□□□ -0.13
VARS-219ENST00000461328 KLHL29Q96CT2 875 aa14.26□□□□□ -0.13
VARS-219ENST00000461328 APIPQ96GX9 242 aa14.26□□□□□ -0.13
VARS-219ENST00000461328 CENPHQ9H3R5 247 aa14.26□□□□□ -0.13
VARS-219ENST00000461328 SLC17A7Q9P2U7 560 aa14.26□□□□□ -0.13
VARS-219ENST00000461328 FIS1Q9Y3D6 152 aa14.26□□□□□ -0.13
VARS-219ENST00000461328 A0A1W2PS29 197 aa14.25□□□□□ -0.13
VARS-219ENST00000461328 TMEM200CA6NKL6 621 aa14.25□□□□□ -0.13
VARS-219ENST00000461328 RGS16O15492 202 aaPredicted RBP14.25□□□□□ -0.13
VARS-219ENST00000461328 TRIM13O60858 407 aa14.25□□□□□ -0.13
VARS-219ENST00000461328 OR6B1O95007 311 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms