RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 DIO3P55073 304 aa13.05□□□□□ -0.32
HDLBP-229ENST00000460826 ERVK-8P63133 956 aa13.05□□□□□ -0.32
HDLBP-229ENST00000460826 BIKQ13323 160 aa13.05□□□□□ -0.32
HDLBP-229ENST00000460826 SMU1Q2TAY7 513 aa13.05□□□□□ -0.32
HDLBP-229ENST00000460826 ZNF385BQ569K4 471 aa13.05□□□□□ -0.32
HDLBP-229ENST00000460826 B3GNTL1Q67FW5 361 aaPredicted RBP13.05□□□□□ -0.32
HDLBP-229ENST00000460826 FCRLBQ6BAA4 426 aa13.05□□□□□ -0.32
HDLBP-229ENST00000460826 B3GNT7Q8NFL0 401 aa13.05□□□□□ -0.32
HDLBP-229ENST00000460826 SLC2A12Q8TD20 617 aa13.05□□□□□ -0.32
HDLBP-229ENST00000460826 RBM18Q96H35 190 aaKnown RBP13.05□□□□□ -0.32
HDLBP-229ENST00000460826 MAELQ96JY0 434 aaKnown RBP13.05□□□□□ -0.32
HDLBP-229ENST00000460826 NPAS2Q99743 824 aa13.05□□□□□ -0.32
HDLBP-229ENST00000460826 OR8D2Q9GZM6 311 aa13.05□□□□□ -0.32
HDLBP-229ENST00000460826 ADNPQ9H2P0 1102 aa13.05□□□□□ -0.32
HDLBP-229ENST00000460826 ZBTB20Q9HC78 741 aaPredicted RBP13.05□□□□□ -0.32
HDLBP-229ENST00000460826 ZNF71Q9NQZ8 489 aaPredicted RBP13.05□□□□□ -0.32
HDLBP-229ENST00000460826 ASIC5Q9NY37 505 aa13.05□□□□□ -0.32
HDLBP-229ENST00000460826 EHD3Q9NZN3 535 aa13.05□□□□□ -0.32
HDLBP-229ENST00000460826 TP53TG5Q9Y2B4 290 aa13.05□□□□□ -0.32
HDLBP-229ENST00000460826 WBP11Q9Y2W2 641 aaKnown RBP13.05□□□□□ -0.32
HDLBP-229ENST00000460826 PCDHGA9Q9Y5G4 932 aaKnown RBP13.05□□□□□ -0.32
HDLBP-229ENST00000460826 CLCA3PQ9Y6N3 262 aa13.05□□□□□ -0.32
HDLBP-229ENST00000460826 TRBV11-1A0A0K0K1C0 115 aa13.04□□□□□ -0.32
HDLBP-229ENST00000460826 ATXN7O15265 892 aaPredicted RBP13.04□□□□□ -0.32
HDLBP-229ENST00000460826 PRKNO60260 465 aaPredicted RBP13.04□□□□□ -0.32
HDLBP-229ENST00000460826 OR10H2O60403 315 aa13.04□□□□□ -0.32
HDLBP-229ENST00000460826 MAN1A2O60476 641 aa13.04□□□□□ -0.32
HDLBP-229ENST00000460826 EDF1O60869 148 aaKnown RBP13.04□□□□□ -0.32
HDLBP-229ENST00000460826 VPS4BO75351 444 aa13.04□□□□□ -0.32
HDLBP-229ENST00000460826 CLPSP04118 112 aa13.04□□□□□ -0.32
HDLBP-229ENST00000460826 ALDOCP09972 364 aaKnown RBP13.04□□□□□ -0.32
HDLBP-229ENST00000460826 PRPS2P11908 318 aa13.04□□□□□ -0.32
HDLBP-229ENST00000460826 ICAM2P13598 275 aa13.04□□□□□ -0.32
HDLBP-229ENST00000460826 COX7A2P14406 83 aa13.04□□□□□ -0.32
HDLBP-229ENST00000460826 CSNK2A2P19784 350 aaPredicted RBP13.04□□□□□ -0.32
HDLBP-229ENST00000460826 MGAT2Q10469 447 aa13.04□□□□□ -0.32
HDLBP-229ENST00000460826 PDE7AQ13946 482 aa13.04□□□□□ -0.32
HDLBP-229ENST00000460826 ZNF267Q14586 743 aaPredicted RBP13.04□□□□□ -0.32
HDLBP-229ENST00000460826 LTB4RQ15722 352 aa13.04□□□□□ -0.32
HDLBP-229ENST00000460826 MPEG1Q2M385 716 aa13.04□□□□□ -0.32
HDLBP-229ENST00000460826 FAM111BQ6SJ93 734 aa13.04□□□□□ -0.32
HDLBP-229ENST00000460826 EPGNQ6UW88 154 aa13.04□□□□□ -0.32
HDLBP-229ENST00000460826 CCDC116Q8IYX3 515 aa13.04□□□□□ -0.32
HDLBP-229ENST00000460826 KRTCAP2Q8N6L1 136 aa13.04□□□□□ -0.32
HDLBP-229ENST00000460826 MORN4Q8NDC4 146 aa13.04□□□□□ -0.32
HDLBP-229ENST00000460826 C9orf43Q8TAL5 461 aaPredicted RBP13.04□□□□□ -0.32
HDLBP-229ENST00000460826 SUN3Q8TAQ9 357 aa13.04□□□□□ -0.32
HDLBP-229ENST00000460826 ZNF721Q8TF20 911 aa13.04□□□□□ -0.32
HDLBP-229ENST00000460826 DAZLQ92904 295 aaKnown RBP13.04□□□□□ -0.32
HDLBP-229ENST00000460826 WBP1Q96G27 269 aa13.04□□□□□ -0.32
HDLBP-229ENST00000460826 VMP1Q96GC9 406 aa13.04□□□□□ -0.32
HDLBP-229ENST00000460826 SENP5Q96HI0 755 aaPredicted RBP13.04□□□□□ -0.32
HDLBP-229ENST00000460826 OR52B2Q96RD2 323 aa13.04□□□□□ -0.32
HDLBP-229ENST00000460826 SMAD5Q99717 465 aaKnown RBP13.04□□□□□ -0.32
HDLBP-229ENST00000460826 PELOQ9BRX2 385 aaKnown RBP13.04□□□□□ -0.32
HDLBP-229ENST00000460826 REEP4Q9H6H4 257 aa13.04□□□□□ -0.32
HDLBP-229ENST00000460826 CXorf21Q9HAI6 301 aa13.04□□□□□ -0.32
HDLBP-229ENST00000460826 KCNK13Q9HB14 408 aa13.04□□□□□ -0.32
HDLBP-229ENST00000460826 SLAMF7Q9NQ25 335 aa13.04□□□□□ -0.32
HDLBP-229ENST00000460826 MIEF1Q9NQG6 463 aa13.04□□□□□ -0.32
HDLBP-229ENST00000460826 SLC35C2Q9NQQ7 365 aa13.04□□□□□ -0.32
HDLBP-229ENST00000460826 PTGFRNQ9P2B2 879 aa13.04□□□□□ -0.32
HDLBP-229ENST00000460826 TUBD1Q9UJT1 453 aa13.04□□□□□ -0.32
HDLBP-229ENST00000460826 PSME2Q9UL46 239 aa13.04□□□□□ -0.32
HDLBP-229ENST00000460826 ERVK-19Q9WJR5 959 aa13.04□□□□□ -0.32
HDLBP-229ENST00000460826 EIF3LQ9Y262 564 aaKnown RBP13.04□□□□□ -0.32
HDLBP-229ENST00000460826 A8MUI8 341 aa13.03□□□□□ -0.32
HDLBP-229ENST00000460826 MYO1GB0I1T2 1018 aa13.03□□□□□ -0.32
HDLBP-229ENST00000460826 IGKV3-11P04433 115 aa13.03□□□□□ -0.32
HDLBP-229ENST00000460826 NT5EP21589 574 aa13.03□□□□□ -0.32
HDLBP-229ENST00000460826 GALNSP34059 522 aa13.03□□□□□ -0.32
HDLBP-229ENST00000460826 ASMTP46597 345 aa13.03□□□□□ -0.32
HDLBP-229ENST00000460826 ST13P50502 369 aaKnown RBP13.03□□□□□ -0.32
HDLBP-229ENST00000460826 CLCN2P51788 898 aa13.03□□□□□ -0.32
HDLBP-229ENST00000460826 MAD2L1Q13257 205 aaPredicted RBP13.03□□□□□ -0.32
HDLBP-229ENST00000460826 CEBPEQ15744 281 aa13.03□□□□□ -0.32
HDLBP-229ENST00000460826 SPRED3Q2MJR0 410 aa13.03□□□□□ -0.32
HDLBP-229ENST00000460826 IRAK1BP1Q5VVH5 260 aa13.03□□□□□ -0.32
HDLBP-229ENST00000460826 TMEM198Q66K66 360 aa13.03□□□□□ -0.32
HDLBP-229ENST00000460826 OGFOD2Q6N063 350 aa13.03□□□□□ -0.32
HDLBP-229ENST00000460826 TCTN3Q6NUS6 607 aa13.03□□□□□ -0.32
HDLBP-229ENST00000460826 H3F3CQ6NXT2 135 aa13.03□□□□□ -0.32
HDLBP-229ENST00000460826 JMJD6Q6NYC1 403 aaPredicted RBP13.03□□□□□ -0.32
HDLBP-229ENST00000460826 GALNT12Q8IXK2 581 aa13.03□□□□□ -0.32
HDLBP-229ENST00000460826 LRRC34Q8IZ02 419 aa13.03□□□□□ -0.32
HDLBP-229ENST00000460826 LRRC25Q8N386 305 aaPredicted RBP13.03□□□□□ -0.32
HDLBP-229ENST00000460826 SIMC1Q8NDZ2 872 aa13.03□□□□□ -0.32
HDLBP-229ENST00000460826 C7orf57Q8NEG2 295 aa13.03□□□□□ -0.32
HDLBP-229ENST00000460826 ADCY4Q8NFM4 1077 aa13.03□□□□□ -0.32
HDLBP-229ENST00000460826 OR7A2PQ8NGA2 310 aa13.03□□□□□ -0.32
HDLBP-229ENST00000460826 OR1N1Q8NGS0 311 aa13.03□□□□□ -0.32
HDLBP-229ENST00000460826 ACTRT2Q8TDY3 377 aa13.03□□□□□ -0.32
HDLBP-229ENST00000460826 RIT1Q92963 219 aa13.03□□□□□ -0.32
HDLBP-229ENST00000460826 THOC1Q96FV9 657 aaKnown RBP13.03□□□□□ -0.32
HDLBP-229ENST00000460826 EBF4Q9BQW3 602 aa13.03□□□□□ -0.32
HDLBP-229ENST00000460826 CNPPD1Q9BV87 410 aa13.03□□□□□ -0.32
HDLBP-229ENST00000460826 TAS2R7Q9NYW3 318 aa13.03□□□□□ -0.32
HDLBP-229ENST00000460826 MAT2BQ9NZL9 334 aa13.03□□□□□ -0.32
HDLBP-229ENST00000460826 NOP53Q9NZM5 478 aaKnown RBP13.03□□□□□ -0.32
HDLBP-229ENST00000460826 ZNF780BQ9Y6R6 833 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms