RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 GAL3ST4Q96RP7 486 aa21.02■□□□□ 0.96
PTPN4-207ENST00000460162 SERPINI1Q99574 410 aa21.02■□□□□ 0.96
PTPN4-207ENST00000460162 ERVK-6Q9BXR3 956 aa21.02■□□□□ 0.96
PTPN4-207ENST00000460162 CDC42EP4Q9H3Q1 356 aaKnown RBP21.02■□□□□ 0.96
PTPN4-207ENST00000460162 ERVK-19Q9WJR5 959 aa21.02■□□□□ 0.96
PTPN4-207ENST00000460162 RNF6Q9Y252 685 aa21.02■□□□□ 0.96
PTPN4-207ENST00000460162 HCFC1P51610 2035 aa21.02■□□□□ 0.96
PTPN4-207ENST00000460162 IQANK1A0A1B0GTG1 560 aa21.01■□□□□ 0.95
PTPN4-207ENST00000460162 A0A1W2PR48 441 aa21.01■□□□□ 0.95
PTPN4-207ENST00000460162 STX16-NPEPL1H3BU86 382 aa21.01■□□□□ 0.95
PTPN4-207ENST00000460162 STX16O14662 325 aa21.01■□□□□ 0.95
PTPN4-207ENST00000460162 ARL1P40616 181 aaPredicted RBP21.01■□□□□ 0.95
PTPN4-207ENST00000460162 SERPINB9P50453 376 aa21.01■□□□□ 0.95
PTPN4-207ENST00000460162 SLC37A1P57057 533 aa21.01■□□□□ 0.95
PTPN4-207ENST00000460162 EBPQ15125 230 aaKnown RBP21.01■□□□□ 0.95
PTPN4-207ENST00000460162 TSNAXIP1Q2TAA8 658 aa21.01■□□□□ 0.95
PTPN4-207ENST00000460162 SLC22A10Q63ZE4 541 aa21.01■□□□□ 0.95
PTPN4-207ENST00000460162 ADGRD1Q6QNK2 874 aa21.01■□□□□ 0.95
PTPN4-207ENST00000460162 MEX3BQ6ZN04 569 aaKnown RBP21.01■□□□□ 0.95
PTPN4-207ENST00000460162 PLD6Q8N2A8 252 aaKnown RBP21.01■□□□□ 0.95
PTPN4-207ENST00000460162 FBXW8Q8N3Y1 598 aa21.01■□□□□ 0.95
PTPN4-207ENST00000460162 RPRMLQ8N4K4 120 aa21.01■□□□□ 0.95
PTPN4-207ENST00000460162 RIT1Q92963 219 aa21.01■□□□□ 0.95
PTPN4-207ENST00000460162 NTMT1Q9BV86 223 aa21.01■□□□□ 0.95
PTPN4-207ENST00000460162 WWTR1Q9GZV5 400 aa21.01■□□□□ 0.95
PTPN4-207ENST00000460162 NOL11Q9H8H0 719 aaKnown RBP21.01■□□□□ 0.95
PTPN4-207ENST00000460162 PNPLA3Q9NST1 481 aa21.01■□□□□ 0.95
PTPN4-207ENST00000460162 XPR1Q9UBH6 696 aa21.01■□□□□ 0.95
PTPN4-207ENST00000460162 IKBKGQ9Y6K9 419 aa21.01■□□□□ 0.95
PTPN4-207ENST00000460162 POLQO75417 2590 aa21■□□□□ 0.95
PTPN4-207ENST00000460162 OR7A17O14581 309 aa21■□□□□ 0.95
PTPN4-207ENST00000460162 SUSD5O60279 629 aa21■□□□□ 0.95
PTPN4-207ENST00000460162 ACSL3O95573 720 aa21■□□□□ 0.95
PTPN4-207ENST00000460162 FBXO45P0C2W1 286 aa21■□□□□ 0.95
PTPN4-207ENST00000460162 SLC35E2P0CK97 266 aa21■□□□□ 0.95
PTPN4-207ENST00000460162 ACVR2AP27037 513 aa21■□□□□ 0.95
PTPN4-207ENST00000460162 NEK2P51955 445 aa21■□□□□ 0.95
PTPN4-207ENST00000460162 CCNG1P51959 295 aa21■□□□□ 0.95
PTPN4-207ENST00000460162 GXYLT1Q4G148 440 aa21■□□□□ 0.95
PTPN4-207ENST00000460162 OR52B6Q8NGF0 335 aa21■□□□□ 0.95
PTPN4-207ENST00000460162 LILRB4Q8NHJ6 448 aa21■□□□□ 0.95
PTPN4-207ENST00000460162 ATP6V1E2Q96A05 226 aa21■□□□□ 0.95
PTPN4-207ENST00000460162 C16orf45Q96MC5 204 aaPredicted RBP21■□□□□ 0.95
PTPN4-207ENST00000460162 CDK15Q96Q40 435 aa21■□□□□ 0.95
PTPN4-207ENST00000460162 PAFAH2Q99487 392 aa21■□□□□ 0.95
PTPN4-207ENST00000460162 FMO2Q99518 471 aa21■□□□□ 0.95
PTPN4-207ENST00000460162 ZNF703Q9H7S9 590 aaPredicted RBP21■□□□□ 0.95
PTPN4-207ENST00000460162 CNIH4Q9P003 139 aa21■□□□□ 0.95
PTPN4-207ENST00000460162 PCTPQ9UKL6 214 aa21■□□□□ 0.95
PTPN4-207ENST00000460162 BOKQ9UMX3 212 aaPredicted RBP21■□□□□ 0.95
PTPN4-207ENST00000460162 SEC23IPQ9Y6Y8 1000 aaKnown RBP21■□□□□ 0.95
PTPN4-207ENST00000460162 GLOD5A6NK44 160 aa20.99■□□□□ 0.95
PTPN4-207ENST00000460162 FAM90A27PA6NNH2 459 aa20.99■□□□□ 0.95
PTPN4-207ENST00000460162 KRT38O76015 456 aa20.99■□□□□ 0.95
PTPN4-207ENST00000460162 URI1O94763 535 aaPredicted RBP20.99■□□□□ 0.95
PTPN4-207ENST00000460162 IGFBP2P18065 325 aa20.99■□□□□ 0.95
PTPN4-207ENST00000460162 CNTFP26441 200 aa20.99■□□□□ 0.95
PTPN4-207ENST00000460162 PIGAP37287 484 aa20.99■□□□□ 0.95
PTPN4-207ENST00000460162 MAN2A2P49641 1150 aa20.99■□□□□ 0.95
PTPN4-207ENST00000460162 NUP107P57740 925 aa20.99■□□□□ 0.95
PTPN4-207ENST00000460162 KCNJ2P63252 427 aa20.99■□□□□ 0.95
PTPN4-207ENST00000460162 TRAF3Q13114 568 aa20.99■□□□□ 0.95
PTPN4-207ENST00000460162 ZNF267Q14586 743 aaPredicted RBP20.99■□□□□ 0.95
PTPN4-207ENST00000460162 GGTA1PQ4G0N0 100 aa20.99■□□□□ 0.95
PTPN4-207ENST00000460162 FRG2Q64ET8 278 aa20.99■□□□□ 0.95
PTPN4-207ENST00000460162 SARAFQ96BY9 339 aa20.99■□□□□ 0.95
PTPN4-207ENST00000460162 PHF21BQ96EK2 531 aa20.99■□□□□ 0.95
PTPN4-207ENST00000460162 FRG2BQ96QU4 278 aa20.99■□□□□ 0.95
PTPN4-207ENST00000460162 ZNF358Q9NW07 568 aa20.99■□□□□ 0.95
PTPN4-207ENST00000460162 CHCHD2Q9Y6H1 151 aaPredicted RBP20.99■□□□□ 0.95
PTPN4-207ENST00000460162 ANKRD17O75179 2603 aaKnown RBP20.99■□□□□ 0.95
PTPN4-207ENST00000460162 EXPH5Q8NEV8 1989 aa20.98■□□□□ 0.95
PTPN4-207ENST00000460162 ATP6AP2A0A1C7CYW4 349 aa20.98■□□□□ 0.95
PTPN4-207ENST00000460162 HCN1O60741 890 aa20.98■□□□□ 0.95
PTPN4-207ENST00000460162 WDR1O75083 606 aa20.98■□□□□ 0.95
PTPN4-207ENST00000460162 SMIM24O75264 130 aa20.98■□□□□ 0.95
PTPN4-207ENST00000460162 ATP6AP2O75787 350 aa20.98■□□□□ 0.95
PTPN4-207ENST00000460162 CLPSP04118 112 aa20.98■□□□□ 0.95
PTPN4-207ENST00000460162 CELA3AP09093 270 aa20.98■□□□□ 0.95
PTPN4-207ENST00000460162 COL6A2P12110 1019 aa20.98■□□□□ 0.95
PTPN4-207ENST00000460162 SERPINB3P29508 390 aa20.98■□□□□ 0.95
PTPN4-207ENST00000460162 TFF3Q07654 80 aa20.98■□□□□ 0.95
PTPN4-207ENST00000460162 SLC10A1Q14973 349 aa20.98■□□□□ 0.95
PTPN4-207ENST00000460162 MMGT1Q8N4V1 131 aa20.98■□□□□ 0.95
PTPN4-207ENST00000460162 FAM13CQ8NE31 585 aa20.98■□□□□ 0.95
PTPN4-207ENST00000460162 OR5M9Q8NGP3 310 aa20.98■□□□□ 0.95
PTPN4-207ENST00000460162 LDAHQ9H6V9 325 aa20.98■□□□□ 0.95
PTPN4-207ENST00000460162 SEMA4BQ9NPR2 832 aaPredicted RBP20.98■□□□□ 0.95
PTPN4-207ENST00000460162 TEX10Q9NXF1 929 aaPredicted RBP20.98■□□□□ 0.95
PTPN4-207ENST00000460162 ZNF180Q9UJW8 692 aa20.98■□□□□ 0.95
PTPN4-207ENST00000460162 ADAM29Q9UKF5 820 aa20.98■□□□□ 0.95
PTPN4-207ENST00000460162 CCDC168Q8NDH2 2452 aa20.98■□□□□ 0.95
PTPN4-207ENST00000460162 FOXO6A8MYZ6 492 aa20.97■□□□□ 0.95
PTPN4-207ENST00000460162 GBAP04062 536 aa20.97■□□□□ 0.95
PTPN4-207ENST00000460162 RPS17P08708 135 aaKnown RBP20.97■□□□□ 0.95
PTPN4-207ENST00000460162 CAPN3P20807 821 aa20.97■□□□□ 0.95
PTPN4-207ENST00000460162 PIK3R1P27986 724 aa20.97■□□□□ 0.95
PTPN4-207ENST00000460162 PMPCAQ10713 525 aa20.97■□□□□ 0.95
PTPN4-207ENST00000460162 IFT88Q13099 833 aa20.97■□□□□ 0.95
PTPN4-207ENST00000460162 NTRK2Q16620 822 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms