RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 TAGAPQ8N103 731 aa17.4■□□□□ 0.38
SEMA3B-209ENST00000456560 OR2L8Q8NGY9 312 aa17.4■□□□□ 0.38
SEMA3B-209ENST00000456560 ZNF675Q8TD23 568 aa17.4■□□□□ 0.38
SEMA3B-209ENST00000456560 DACH2Q96NX9 599 aa17.4■□□□□ 0.38
SEMA3B-209ENST00000456560 ANKHQ9HCJ1 492 aa17.4■□□□□ 0.38
SEMA3B-209ENST00000456560 CCDC88CQ9P219 2028 aa17.4■□□□□ 0.38
SEMA3B-209ENST00000456560 A0A1W2PP55 124 aa17.4■□□□□ 0.38
SEMA3B-209ENST00000456560 ANHXE9PGG2 379 aa17.4■□□□□ 0.38
SEMA3B-209ENST00000456560 AIREO43918 545 aa17.4■□□□□ 0.38
SEMA3B-209ENST00000456560 MPZL2O60487 215 aa17.4■□□□□ 0.38
SEMA3B-209ENST00000456560 ADAP00813 363 aa17.4■□□□□ 0.38
SEMA3B-209ENST00000456560 ADORA3P0DMS8 318 aa17.4■□□□□ 0.38
SEMA3B-209ENST00000456560 GADD45AP24522 165 aa17.4■□□□□ 0.38
SEMA3B-209ENST00000456560 TUBA1BP68363 451 aa17.4■□□□□ 0.38
SEMA3B-209ENST00000456560 SEC23BQ15437 767 aa17.4■□□□□ 0.38
SEMA3B-209ENST00000456560 BCL2A1Q16548 175 aa17.4■□□□□ 0.38
SEMA3B-209ENST00000456560 FBXO43Q4G163 708 aa17.4■□□□□ 0.38
SEMA3B-209ENST00000456560 TUBA1AQ71U36 451 aa17.4■□□□□ 0.38
SEMA3B-209ENST00000456560 STX19Q8N4C7 294 aa17.4■□□□□ 0.38
SEMA3B-209ENST00000456560 B3GNT7Q8NFL0 401 aa17.4■□□□□ 0.38
SEMA3B-209ENST00000456560 OR4D11Q8NGI4 311 aa17.4■□□□□ 0.38
SEMA3B-209ENST00000456560 KLK6Q92876 244 aa17.4■□□□□ 0.38
SEMA3B-209ENST00000456560 GDF15Q99988 308 aa17.4■□□□□ 0.38
SEMA3B-209ENST00000456560 C1QTNF2Q9BXJ5 285 aa17.4■□□□□ 0.38
SEMA3B-209ENST00000456560 BTBD1Q9H0C5 482 aa17.4■□□□□ 0.38
SEMA3B-209ENST00000456560 DCSTAMPQ9H295 470 aa17.4■□□□□ 0.38
SEMA3B-209ENST00000456560 NKX2-4Q9H2Z4 354 aa17.4■□□□□ 0.38
SEMA3B-209ENST00000456560 GLIPR2Q9H4G4 154 aa17.4■□□□□ 0.38
SEMA3B-209ENST00000456560 PLEKHM1Q9Y4G2 1056 aa17.4■□□□□ 0.38
SEMA3B-209ENST00000456560 A0A0G2JN53 185 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 LATO43561 262 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 PTHP01270 115 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 CD72P21854 359 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 CNR2P34972 360 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 TP53BP2Q13625 1128 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 KCNJ8Q15842 424 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 TMEM35AQ53FP2 167 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 TTLQ8NG68 377 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 CRELD1Q96HD1 420 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 ZNF354BQ96LW1 612 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 AMDHD1Q96NU7 426 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 ZNF607Q96SK3 696 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 WFDC6Q9BQY6 131 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 FUZQ9BT04 418 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 CDCA4Q9BXL8 241 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 DSN1Q9H410 356 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 OSGEPL1Q9H4B0 414 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 KLHL31Q9H511 634 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 EHD3Q9NZN3 535 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 ACAD8Q9UKU7 415 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 KCNK6Q9Y257 313 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 CKAP5Q14008 2032 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 PRICKLE3O43900 615 aaPredicted RBP17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 SH3BP5O60239 455 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 OXSR1O95747 527 aaPredicted RBP17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 APODP05090 189 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 CEACAM5P06731 702 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 OR12D1P0DN82 309 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 ELAVL4P26378 380 aaKnown RBP17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 CD40LGP29965 261 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 GRK5P34947 590 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 BCL6P41182 706 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 SSR2P43308 183 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 LIMK1P53667 647 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 FOXD4Q12950 439 aaPredicted RBP17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 NDUFAF5Q5TEU4 345 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 ADCK2Q7Z695 626 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 RBM45Q8IUH3 476 aaKnown RBP17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 C17orf62Q9BQA9 187 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 UCK2Q9BZX2 261 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 OR51I1Q9H343 314 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 IMP3Q9NV31 184 aaKnown RBP17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 CNOT2Q9NZN8 540 aaKnown RBP17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 TMCC3Q9ULS5 477 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 SLC17A4Q9Y2C5 497 aa17.39■□□□□ 0.37
SEMA3B-209ENST00000456560 MYO9BQ13459 2157 aa17.38■□□□□ 0.37
SEMA3B-209ENST00000456560 EFCAB10A6NFE3 127 aa17.38■□□□□ 0.37
SEMA3B-209ENST00000456560 SLC28A2O43868 658 aa17.38■□□□□ 0.37
SEMA3B-209ENST00000456560 SERPIND1P05546 499 aa17.38■□□□□ 0.37
SEMA3B-209ENST00000456560 ADRA2AP08913 450 aa17.38■□□□□ 0.37
SEMA3B-209ENST00000456560 OSMP13725 252 aa17.38■□□□□ 0.37
SEMA3B-209ENST00000456560 CLK1P49759 484 aaKnown RBP17.38■□□□□ 0.37
SEMA3B-209ENST00000456560 PPP5CP53041 499 aa17.38■□□□□ 0.37
SEMA3B-209ENST00000456560 HYAL2Q12891 473 aa17.38■□□□□ 0.37
SEMA3B-209ENST00000456560 ILKQ13418 452 aa17.38■□□□□ 0.37
SEMA3B-209ENST00000456560 SYPL1Q16563 259 aa17.38■□□□□ 0.37
SEMA3B-209ENST00000456560 PTCHD4Q6ZW05 846 aa17.38■□□□□ 0.37
SEMA3B-209ENST00000456560 C9orf43Q8TAL5 461 aaPredicted RBP17.38■□□□□ 0.37
SEMA3B-209ENST00000456560 RASSF5Q8WWW0 418 aa17.38■□□□□ 0.37
SEMA3B-209ENST00000456560 SLC35G5Q96KT7 338 aa17.38■□□□□ 0.37
SEMA3B-209ENST00000456560 TREX2Q9BQ50 279 aaPredicted RBP17.38■□□□□ 0.37
SEMA3B-209ENST00000456560 SLC35C2Q9NQQ7 365 aa17.38■□□□□ 0.37
SEMA3B-209ENST00000456560 ZSCAN32Q9NX65 697 aa17.38■□□□□ 0.37
SEMA3B-209ENST00000456560 NDOR1Q9UHB4 597 aa17.38■□□□□ 0.37
SEMA3B-209ENST00000456560 MGAT4BQ9UQ53 548 aa17.38■□□□□ 0.37
SEMA3B-209ENST00000456560 RBMX2Q9Y388 322 aaKnown RBP17.38■□□□□ 0.37
SEMA3B-209ENST00000456560 PCDHGA3Q9Y5H0 932 aa17.38■□□□□ 0.37
SEMA3B-209ENST00000456560 C5orf42Q9H799 3197 aa17.38■□□□□ 0.37
SEMA3B-209ENST00000456560 XIRP2A4UGR9 3374 aa17.38■□□□□ 0.37
SEMA3B-209ENST00000456560 WASHC1A8K0Z3 465 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms