RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 CCDC151A5D8V7 595 aa16.52■□□□□ 0.24
MSH6-207ENST00000456246 GLOD5A6NK44 160 aa16.52■□□□□ 0.24
MSH6-207ENST00000456246 E9PLN8 166 aa16.52■□□□□ 0.24
MSH6-207ENST00000456246 HNRNPRO43390 633 aaKnown RBP16.52■□□□□ 0.24
MSH6-207ENST00000456246 GBAP04062 536 aa16.52■□□□□ 0.24
MSH6-207ENST00000456246 P04436 131 aa16.52■□□□□ 0.24
MSH6-207ENST00000456246 FAM153BP0C7A2 387 aa16.52■□□□□ 0.24
MSH6-207ENST00000456246 IMPDH1P20839 514 aa16.52■□□□□ 0.24
MSH6-207ENST00000456246 PTGER1P34995 402 aa16.52■□□□□ 0.24
MSH6-207ENST00000456246 RFC3P40938 356 aa16.52■□□□□ 0.24
MSH6-207ENST00000456246 SLC37A1P57057 533 aa16.52■□□□□ 0.24
MSH6-207ENST00000456246 NAA20P61599 178 aa16.52■□□□□ 0.24
MSH6-207ENST00000456246 ASPHQ12797 758 aa16.52■□□□□ 0.24
MSH6-207ENST00000456246 ZNF267Q14586 743 aaPredicted RBP16.52■□□□□ 0.24
MSH6-207ENST00000456246 FAM153CQ494X1 144 aa16.52■□□□□ 0.24
MSH6-207ENST00000456246 CMPK2Q5EBM0 449 aa16.52■□□□□ 0.24
MSH6-207ENST00000456246 GPRIN3Q6ZVF9 776 aa16.52■□□□□ 0.24
MSH6-207ENST00000456246 COMMD6Q7Z4G1 85 aa16.52■□□□□ 0.24
MSH6-207ENST00000456246 CHERPQ8IWX8 916 aaKnown RBP16.52■□□□□ 0.24
MSH6-207ENST00000456246 GALNT12Q8IXK2 581 aa16.52■□□□□ 0.24
MSH6-207ENST00000456246 OR4K14Q8NGD5 310 aa16.52■□□□□ 0.24
MSH6-207ENST00000456246 AGAP11Q8TF27 550 aa16.52■□□□□ 0.24
MSH6-207ENST00000456246 TMEM237Q96Q45 408 aa16.52■□□□□ 0.24
MSH6-207ENST00000456246 VKORC1Q9BQB6 163 aa16.52■□□□□ 0.24
MSH6-207ENST00000456246 CHST11Q9NPF2 352 aa16.52■□□□□ 0.24
MSH6-207ENST00000456246 DEPPQ9NTK1 212 aa16.52■□□□□ 0.24
MSH6-207ENST00000456246 TEX15Q9BXT5 2789 aa16.52■□□□□ 0.23
MSH6-207ENST00000456246 NCOA6Q14686 2063 aaPredicted RBP16.52■□□□□ 0.23
MSH6-207ENST00000456246 NBPF19A0A087WUL8 3843 aa16.51■□□□□ 0.23
MSH6-207ENST00000456246 GOLGA6L10A6NI86 522 aa16.51■□□□□ 0.23
MSH6-207ENST00000456246 DLX3O60479 287 aa16.51■□□□□ 0.23
MSH6-207ENST00000456246 CDC40O60508 579 aaKnown RBP eCLIP16.51■□□□□ 0.23
MSH6-207ENST00000456246 GLRA3O75311 464 aa16.51■□□□□ 0.23
MSH6-207ENST00000456246 PDYNP01213 254 aa16.51■□□□□ 0.23
MSH6-207ENST00000456246 SERPINB3P29508 390 aa16.51■□□□□ 0.23
MSH6-207ENST00000456246 PRKAA2P54646 552 aa16.51■□□□□ 0.23
MSH6-207ENST00000456246 PKNOX1P55347 436 aa16.51■□□□□ 0.23
MSH6-207ENST00000456246 PPIAP62937 165 aaKnown RBP16.51■□□□□ 0.23
MSH6-207ENST00000456246 TRA2BP62995 288 aaKnown RBP16.51■□□□□ 0.23
MSH6-207ENST00000456246 HSF1Q00613 529 aa16.51■□□□□ 0.23
MSH6-207ENST00000456246 CSTF3Q12996 717 aaKnown RBP16.51■□□□□ 0.23
MSH6-207ENST00000456246 LCP2Q13094 533 aa16.51■□□□□ 0.23
MSH6-207ENST00000456246 EBPQ15125 230 aaKnown RBP16.51■□□□□ 0.23
MSH6-207ENST00000456246 ZNF791Q3KP31 576 aaPredicted RBP16.51■□□□□ 0.23
MSH6-207ENST00000456246 UNC50Q53HI1 259 aa16.51■□□□□ 0.23
MSH6-207ENST00000456246 SGO1Q5FBB7 561 aa16.51■□□□□ 0.23
MSH6-207ENST00000456246 DGAT2L6Q6ZPD8 337 aa16.51■□□□□ 0.23
MSH6-207ENST00000456246 FAM47EQ6ZV65 393 aa16.51■□□□□ 0.23
MSH6-207ENST00000456246 RPS27LQ71UM5 84 aaKnown RBP16.51■□□□□ 0.23
MSH6-207ENST00000456246 TAGAPQ8N103 731 aa16.51■□□□□ 0.23
MSH6-207ENST00000456246 GBP7Q8N8V2 638 aaPredicted RBP16.51■□□□□ 0.23
MSH6-207ENST00000456246 FAM57AQ8TBR7 257 aa16.51■□□□□ 0.23
MSH6-207ENST00000456246 SPACA9Q96E40 222 aaPredicted RBP16.51■□□□□ 0.23
MSH6-207ENST00000456246 L3HYPDHQ96EM0 354 aa16.51■□□□□ 0.23
MSH6-207ENST00000456246 GAL3ST4Q96RP7 486 aa16.51■□□□□ 0.23
MSH6-207ENST00000456246 FAIM2Q9BWQ8 316 aa16.51■□□□□ 0.23
MSH6-207ENST00000456246 WWTR1Q9GZV5 400 aa16.51■□□□□ 0.23
MSH6-207ENST00000456246 EPB41L4BQ9H329 900 aa16.51■□□□□ 0.23
MSH6-207ENST00000456246 ZDHHC11Q9H8X9 412 aa16.51■□□□□ 0.23
MSH6-207ENST00000456246 L2HGDHQ9H9P8 463 aa16.51■□□□□ 0.23
MSH6-207ENST00000456246 CXorf21Q9HAI6 301 aa16.51■□□□□ 0.23
MSH6-207ENST00000456246 IL1RL2Q9HB29 575 aa16.51■□□□□ 0.23
MSH6-207ENST00000456246 VPS29Q9UBQ0 182 aa16.51■□□□□ 0.23
MSH6-207ENST00000456246 PSME2Q9UL46 239 aa16.51■□□□□ 0.23
MSH6-207ENST00000456246 ITPR2Q14571 2701 aa16.5■□□□□ 0.23
MSH6-207ENST00000456246 A0A1B0GTH9 108 aa16.5■□□□□ 0.23
MSH6-207ENST00000456246 A0A1B0GTL3 188 aa16.5■□□□□ 0.23
MSH6-207ENST00000456246 CAPN14A8MX76 684 aa16.5■□□□□ 0.23
MSH6-207ENST00000456246 H3BQF6 201 aa16.5■□□□□ 0.23
MSH6-207ENST00000456246 HRKO00198 91 aa16.5■□□□□ 0.23
MSH6-207ENST00000456246 PPP6CO00743 305 aa16.5■□□□□ 0.23
MSH6-207ENST00000456246 PGRMC2O15173 223 aa16.5■□□□□ 0.23
MSH6-207ENST00000456246 OR4F21O95013 312 aa16.5■□□□□ 0.23
MSH6-207ENST00000456246 ENO1P06733 434 aaKnown RBP16.5■□□□□ 0.23
MSH6-207ENST00000456246 PYGBP11216 843 aa16.5■□□□□ 0.23
MSH6-207ENST00000456246 CPMP14384 443 aa16.5■□□□□ 0.23
MSH6-207ENST00000456246 TSPAN8P19075 237 aa16.5■□□□□ 0.23
MSH6-207ENST00000456246 TNFRSF8P28908 595 aa16.5■□□□□ 0.23
MSH6-207ENST00000456246 HMOX2P30519 316 aa16.5■□□□□ 0.23
MSH6-207ENST00000456246 ADORA2A-AS1P86434 159 aa16.5■□□□□ 0.23
MSH6-207ENST00000456246 GALNT1Q10472 559 aaPredicted RBP16.5■□□□□ 0.23
MSH6-207ENST00000456246 HYAL4Q2M3T9 481 aa16.5■□□□□ 0.23
MSH6-207ENST00000456246 ZNF750Q32MQ0 723 aa16.5■□□□□ 0.23
MSH6-207ENST00000456246 SLC22A10Q63ZE4 541 aa16.5■□□□□ 0.23
MSH6-207ENST00000456246 SLC48A1Q6P1K1 146 aa16.5■□□□□ 0.23
MSH6-207ENST00000456246 DOLPP1Q86YN1 238 aa16.5■□□□□ 0.23
MSH6-207ENST00000456246 FAM109AQ8N4B1 249 aa16.5■□□□□ 0.23
MSH6-207ENST00000456246 CDYL2Q8N8U2 506 aa16.5■□□□□ 0.23
MSH6-207ENST00000456246 PAQR8Q8TEZ7 354 aa16.5■□□□□ 0.23
MSH6-207ENST00000456246 MZB1Q8WU39 189 aa16.5■□□□□ 0.23
MSH6-207ENST00000456246 TP53INP1Q96A56 240 aa16.5■□□□□ 0.23
MSH6-207ENST00000456246 TTTY12Q9BZ98 90 aa16.5■□□□□ 0.23
MSH6-207ENST00000456246 FARSBQ9NSD9 589 aaKnown RBP16.5■□□□□ 0.23
MSH6-207ENST00000456246 CNIH4Q9P003 139 aa16.5■□□□□ 0.23
MSH6-207ENST00000456246 TBK1Q9UHD2 729 aa16.5■□□□□ 0.23
MSH6-207ENST00000456246 ZNF225Q9UK10 706 aa16.5■□□□□ 0.23
MSH6-207ENST00000456246 PCDHA9Q9Y5H5 950 aa16.5■□□□□ 0.23
MSH6-207ENST00000456246 CACNA1DQ01668 2161 aa16.5■□□□□ 0.23
MSH6-207ENST00000456246 CRYBG3Q68DQ2 2970 aa16.49■□□□□ 0.23
MSH6-207ENST00000456246 C2orf92A0A1B0GVN3 265 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms