RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 DEPPQ9NTK1 212 aa19.64■□□□□ 0.73
HMGB3-205ENST00000455596 A0A1W2PPM1 405 aa19.63■□□□□ 0.73
HMGB3-205ENST00000455596 OR6C76A6NM76 312 aa19.63■□□□□ 0.73
HMGB3-205ENST00000455596 ACOT7O00154 380 aa19.63■□□□□ 0.73
HMGB3-205ENST00000455596 ZNF354AO60765 605 aaPredicted RBP19.63■□□□□ 0.73
HMGB3-205ENST00000455596 SHBGP04278 402 aa19.63■□□□□ 0.73
HMGB3-205ENST00000455596 HSD3B1P14060 373 aa19.63■□□□□ 0.73
HMGB3-205ENST00000455596 CNR1P21554 472 aa19.63■□□□□ 0.73
HMGB3-205ENST00000455596 HSD3B2P26439 372 aa19.63■□□□□ 0.73
HMGB3-205ENST00000455596 HMOX2P30519 316 aa19.63■□□□□ 0.73
HMGB3-205ENST00000455596 PTGER1P34995 402 aa19.63■□□□□ 0.73
HMGB3-205ENST00000455596 DCTP40126 519 aa19.63■□□□□ 0.73
HMGB3-205ENST00000455596 PLGLB1Q02325 96 aa19.63■□□□□ 0.73
HMGB3-205ENST00000455596 GALNT1Q10472 559 aaPredicted RBP19.63■□□□□ 0.73
HMGB3-205ENST00000455596 ZNF787Q6DD87 383 aa19.63■□□□□ 0.73
HMGB3-205ENST00000455596 RPTNQ6XPR3 784 aa19.63■□□□□ 0.73
HMGB3-205ENST00000455596 SLC15A4Q8N697 577 aa19.63■□□□□ 0.73
HMGB3-205ENST00000455596 ITLN2Q8WWU7 325 aaPredicted RBP19.63■□□□□ 0.73
HMGB3-205ENST00000455596 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.63■□□□□ 0.73
HMGB3-205ENST00000455596 HBEGFQ99075 208 aa19.63■□□□□ 0.73
HMGB3-205ENST00000455596 PPCSQ9HAB8 311 aa19.63■□□□□ 0.73
HMGB3-205ENST00000455596 SACM1LQ9NTJ5 587 aa19.63■□□□□ 0.73
HMGB3-205ENST00000455596 RYDENQ9NUL5 291 aaKnown RBP19.63■□□□□ 0.73
HMGB3-205ENST00000455596 C1orf226A1L170 272 aa19.62■□□□□ 0.73
HMGB3-205ENST00000455596 PINLYPA6NC86 204 aa19.62■□□□□ 0.73
HMGB3-205ENST00000455596 MANBAO00462 879 aa19.62■□□□□ 0.73
HMGB3-205ENST00000455596 CDC40O60508 579 aaKnown RBP eCLIP19.62■□□□□ 0.73
HMGB3-205ENST00000455596 P04436 131 aa19.62■□□□□ 0.73
HMGB3-205ENST00000455596 SLC37A1P57057 533 aa19.62■□□□□ 0.73
HMGB3-205ENST00000455596 TBL3Q12788 808 aaKnown RBP19.62■□□□□ 0.73
HMGB3-205ENST00000455596 CSTF3Q12996 717 aaKnown RBP19.62■□□□□ 0.73
HMGB3-205ENST00000455596 CMPK2Q5EBM0 449 aa19.62■□□□□ 0.73
HMGB3-205ENST00000455596 TCHHL1Q5QJ38 904 aaPredicted RBP19.62■□□□□ 0.73
HMGB3-205ENST00000455596 C6orf163Q5TEZ5 329 aa19.62■□□□□ 0.73
HMGB3-205ENST00000455596 FAM219BQ5XKK7 198 aa19.62■□□□□ 0.73
HMGB3-205ENST00000455596 GK5Q6ZS86 529 aa19.62■□□□□ 0.73
HMGB3-205ENST00000455596 MRGPRGQ86SM5 289 aa19.62■□□□□ 0.73
HMGB3-205ENST00000455596 ZNF808Q8N4W9 903 aaPredicted RBP19.62■□□□□ 0.73
HMGB3-205ENST00000455596 METTL6Q8TCB7 284 aa19.62■□□□□ 0.73
HMGB3-205ENST00000455596 CCDC126Q96EE4 140 aa19.62■□□□□ 0.73
HMGB3-205ENST00000455596 GAL3ST4Q96RP7 486 aa19.62■□□□□ 0.73
HMGB3-205ENST00000455596 FAM173AQ9BQD7 235 aa19.62■□□□□ 0.73
HMGB3-205ENST00000455596 VPS29Q9UBQ0 182 aa19.62■□□□□ 0.73
HMGB3-205ENST00000455596 PCDHA9Q9Y5H5 950 aa19.62■□□□□ 0.73
HMGB3-205ENST00000455596 A0A1B0GTH9 108 aa19.61■□□□□ 0.73
HMGB3-205ENST00000455596 A0A1W2PS29 197 aa19.61■□□□□ 0.73
HMGB3-205ENST00000455596 PRRG2O14669 202 aa19.61■□□□□ 0.73
HMGB3-205ENST00000455596 ZNHIT1O43257 154 aa19.61■□□□□ 0.73
HMGB3-205ENST00000455596 ULK1O75385 1050 aa19.61■□□□□ 0.73
HMGB3-205ENST00000455596 NADKO95544 446 aaPredicted RBP19.61■□□□□ 0.73
HMGB3-205ENST00000455596 KRT15P19012 456 aa19.61■□□□□ 0.73
HMGB3-205ENST00000455596 SLCO1A2P46721 670 aa19.61■□□□□ 0.73
HMGB3-205ENST00000455596 XKP51811 444 aa19.61■□□□□ 0.73
HMGB3-205ENST00000455596 PKNOX1P55347 436 aa19.61■□□□□ 0.73
HMGB3-205ENST00000455596 LCP2Q13094 533 aa19.61■□□□□ 0.73
HMGB3-205ENST00000455596 EBPQ15125 230 aaKnown RBP19.61■□□□□ 0.73
HMGB3-205ENST00000455596 ZNF791Q3KP31 576 aaPredicted RBP19.61■□□□□ 0.73
HMGB3-205ENST00000455596 RGS9BPQ6ZS82 235 aa19.61■□□□□ 0.73
HMGB3-205ENST00000455596 FAM47EQ6ZV65 393 aa19.61■□□□□ 0.73
HMGB3-205ENST00000455596 TDRPQ86YL5 185 aa19.61■□□□□ 0.73
HMGB3-205ENST00000455596 CHERPQ8IWX8 916 aaKnown RBP19.61■□□□□ 0.73
HMGB3-205ENST00000455596 GALNT12Q8IXK2 581 aa19.61■□□□□ 0.73
HMGB3-205ENST00000455596 DND1Q8IYX4 353 aaKnown RBP19.61■□□□□ 0.73
HMGB3-205ENST00000455596 C1orf52Q8N6N3 182 aaKnown RBP19.61■□□□□ 0.73
HMGB3-205ENST00000455596 OR52N2Q8NGI0 321 aa19.61■□□□□ 0.73
HMGB3-205ENST00000455596 WWTR1Q9GZV5 400 aa19.61■□□□□ 0.73
HMGB3-205ENST00000455596 CXorf21Q9HAI6 301 aa19.61■□□□□ 0.73
HMGB3-205ENST00000455596 EMCNQ9ULC0 261 aa19.61■□□□□ 0.73
HMGB3-205ENST00000455596 MEMO1Q9Y316 297 aa19.61■□□□□ 0.73
HMGB3-205ENST00000455596 NCKAP5O14513 1909 aa19.61■□□□□ 0.73
HMGB3-205ENST00000455596 A0A0G2JMM0 328 aa19.6■□□□□ 0.73
HMGB3-205ENST00000455596 A0A1W2PPB8 328 aa19.6■□□□□ 0.73
HMGB3-205ENST00000455596 A0A1W2PRS3 328 aa19.6■□□□□ 0.73
HMGB3-205ENST00000455596 GOLGA6L10A6NI86 522 aa19.6■□□□□ 0.73
HMGB3-205ENST00000455596 SMIM23A6NLE4 172 aa19.6■□□□□ 0.73
HMGB3-205ENST00000455596 KIR3DP1A8MWS1 328 aa19.6■□□□□ 0.73
HMGB3-205ENST00000455596 FOXO6A8MYZ6 492 aa19.6■□□□□ 0.73
HMGB3-205ENST00000455596 PRSS44E7EML9 344 aa19.6■□□□□ 0.73
HMGB3-205ENST00000455596 G3V3Y1 287 aa19.6■□□□□ 0.73
HMGB3-205ENST00000455596 CLPSP04118 112 aa19.6■□□□□ 0.73
HMGB3-205ENST00000455596 ENO1P06733 434 aaKnown RBP19.6■□□□□ 0.73
HMGB3-205ENST00000455596 CCL3P10147 92 aa19.6■□□□□ 0.73
HMGB3-205ENST00000455596 MYL2P10916 166 aa19.6■□□□□ 0.73
HMGB3-205ENST00000455596 CPMP14384 443 aa19.6■□□□□ 0.73
HMGB3-205ENST00000455596 SSTR4P31391 388 aa19.6■□□□□ 0.73
HMGB3-205ENST00000455596 PTGS2P35354 604 aa19.6■□□□□ 0.73
HMGB3-205ENST00000455596 DEKP35659 375 aaKnown RBP19.6■□□□□ 0.73
HMGB3-205ENST00000455596 PPIAP62937 165 aaKnown RBP19.6■□□□□ 0.73
HMGB3-205ENST00000455596 TRA2BP62995 288 aaKnown RBP19.6■□□□□ 0.73
HMGB3-205ENST00000455596 ART3Q13508 389 aa19.6■□□□□ 0.73
HMGB3-205ENST00000455596 SLC22A10Q63ZE4 541 aa19.6■□□□□ 0.73
HMGB3-205ENST00000455596 SLC48A1Q6P1K1 146 aa19.6■□□□□ 0.73
HMGB3-205ENST00000455596 PAOXQ6QHF9 649 aa19.6■□□□□ 0.73
HMGB3-205ENST00000455596 ZYG11AQ6WRX3 759 aa19.6■□□□□ 0.73
HMGB3-205ENST00000455596 FGD2Q7Z6J4 655 aa19.6■□□□□ 0.73
HMGB3-205ENST00000455596 SLC22A16Q86VW1 577 aa19.6■□□□□ 0.73
HMGB3-205ENST00000455596 SLC34A3Q8N130 599 aa19.6■□□□□ 0.73
HMGB3-205ENST00000455596 EID3Q8N140 333 aa19.6■□□□□ 0.73
HMGB3-205ENST00000455596 CHTF18Q8WVB6 975 aa19.6■□□□□ 0.73
HMGB3-205ENST00000455596 TM4SF18Q96CE8 201 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms