RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 NAGSQ8N159 534 aa12.62□□□□□ -0.39
LINC00343-203ENST00000454555 FBXO15Q8NCQ5 510 aaPredicted RBP12.62□□□□□ -0.39
LINC00343-203ENST00000454555 FAM46DQ8NEK8 389 aa12.62□□□□□ -0.39
LINC00343-203ENST00000454555 ELMO1Q92556 727 aa12.62□□□□□ -0.39
LINC00343-203ENST00000454555 MGLLQ99685 303 aa12.62□□□□□ -0.39
LINC00343-203ENST00000454555 SLX1AQ9BQ83 275 aa12.62□□□□□ -0.39
LINC00343-203ENST00000454555 TAPBPLQ9BX59 468 aa12.62□□□□□ -0.39
LINC00343-203ENST00000454555 GPR174Q9BXC1 333 aa12.62□□□□□ -0.39
LINC00343-203ENST00000454555 OR51E2Q9H255 320 aa12.62□□□□□ -0.39
LINC00343-203ENST00000454555 SYNDIG1Q9H7V2 258 aa12.62□□□□□ -0.39
LINC00343-203ENST00000454555 GPR83Q9NYM4 423 aa12.62□□□□□ -0.39
LINC00343-203ENST00000454555 SEC14L4Q9UDX3 406 aa12.62□□□□□ -0.39
LINC00343-203ENST00000454555 NDOR1Q9UHB4 597 aa12.62□□□□□ -0.39
LINC00343-203ENST00000454555 MBD1Q9UIS9 605 aaPredicted RBP12.62□□□□□ -0.39
LINC00343-203ENST00000454555 ZNF221Q9UK13 617 aa12.62□□□□□ -0.39
LINC00343-203ENST00000454555 ZFR2Q9UPR6 939 aaKnown RBP12.62□□□□□ -0.39
LINC00343-203ENST00000454555 WBP11Q9Y2W2 641 aaKnown RBP12.62□□□□□ -0.39
LINC00343-203ENST00000454555 PCDHGB2Q9Y5G2 931 aa12.62□□□□□ -0.39
LINC00343-203ENST00000454555 ENPP4Q9Y6X5 453 aa12.62□□□□□ -0.39
LINC00343-203ENST00000454555 SLC35F4A4IF30 521 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 FADS2P1A8MWK0 482 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 CENPBD1B2RD01 187 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 E7EQ34 232 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 LATO43561 262 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 PCDH7O60245 1069 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 KIAA0513O60268 411 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 LZTS3O60299 673 aaPredicted RBP12.61□□□□□ -0.39
LINC00343-203ENST00000454555 GCM2O75603 506 aaPredicted RBP12.61□□□□□ -0.39
LINC00343-203ENST00000454555 ADAP00813 363 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 SCG5P05408 212 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 SP9P0CG40 484 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 CRATP43155 626 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 MVDP53602 400 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 CDH12P55289 794 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 SNRPGP62308 76 aaKnown RBP12.61□□□□□ -0.39
LINC00343-203ENST00000454555 GAB1Q13480 694 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 EXOC3L2Q2M3D2 409 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 TMEM201Q5SNT2 666 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.61□□□□□ -0.39
LINC00343-203ENST00000454555 KIAA0895LQ68EN5 471 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 MED27Q6P2C8 311 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 AGTRAPQ6RW13 159 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 IKBIPQ70UQ0 350 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 VRK3Q8IV63 474 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 NRSN1Q8IZ57 195 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 SLC22A15Q8IZD6 547 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 FAM160A2Q8N612 972 aaPredicted RBP12.61□□□□□ -0.39
LINC00343-203ENST00000454555 FAM83FQ8NEG4 500 aaPredicted RBP12.61□□□□□ -0.39
LINC00343-203ENST00000454555 B3GNT7Q8NFL0 401 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 IL17RDQ8NFM7 739 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 UTP15Q8TED0 518 aaKnown RBP12.61□□□□□ -0.39
LINC00343-203ENST00000454555 WDR34Q96EX3 536 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 FOPNLQ96NB1 174 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 MTERF1Q99551 399 aaKnown RBP12.61□□□□□ -0.39
LINC00343-203ENST00000454555 CHCHD6Q9BRQ6 235 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 EFCAB11Q9BUY7 163 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 NEK6Q9HC98 313 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 FZD3Q9NPG1 666 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 ZSCAN32Q9NX65 697 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 MS4A12Q9NXJ0 267 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 STOX2Q9P2F5 926 aaPredicted RBP12.61□□□□□ -0.39
LINC00343-203ENST00000454555 GULP1Q9UBP9 304 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 KCNE2Q9Y6J6 123 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 A0A0C4DFX4 3053 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 GNG14A0A1W2PPG7 69 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 IGLON5A6NGN9 336 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 METTL12A8MUP2 240 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 YY2O15391 372 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 CCNKO75909 580 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 GADD45GO95257 159 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 NUDT7P0C024 238 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 ARAFP10398 606 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 NUDT1P36639 197 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 RPS5P46782 204 aaKnown RBP12.61□□□□□ -0.39
LINC00343-203ENST00000454555 PCBP3P57721 371 aaKnown RBP12.61□□□□□ -0.39
LINC00343-203ENST00000454555 PPP2CBP62714 309 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 PPP2CAP67775 309 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 CDK6Q00534 326 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 EEF1A2Q05639 463 aaKnown RBP12.61□□□□□ -0.39
LINC00343-203ENST00000454555 ZNF284Q2VY69 593 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 Q6ZVL8 140 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 ZNF765Q7L2R6 523 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 GDPD3Q7L5L3 318 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 ATCAYQ86WG3 371 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 TRAM1L1Q8N609 369 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 ZBTB44Q8NCP5 570 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 OR7G3Q8NG95 312 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 CDC26Q8NHZ8 85 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.61□□□□□ -0.39
LINC00343-203ENST00000454555 DTD2Q96FN9 168 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 NIPSNAP1Q9BPW8 284 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 SLC35A5Q9BS91 424 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 LRFN3Q9BTN0 628 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 CENPOQ9BU64 300 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 SLC17A9Q9BYT1 436 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 ATG10Q9H0Y0 220 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 C6orf106Q9H6K1 298 aaPredicted RBP12.61□□□□□ -0.39
LINC00343-203ENST00000454555 MYNNQ9NPC7 610 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 C1GALT1Q9NS00 363 aa12.61□□□□□ -0.39
LINC00343-203ENST00000454555 SH3BP4Q9P0V3 963 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms