RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 OR52E8Q6IFG1 317 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 RNF111Q6ZNA4 994 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 DGAT2L6Q6ZPD8 337 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 NCCRP1Q6ZVX7 275 aaPredicted RBP11.92□□□□□ -0.5
CHD3-206ENST00000452447 PAGE2Q7Z2X7 111 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 SRRM1Q8IYB3 904 aaKnown RBP11.92□□□□□ -0.5
CHD3-206ENST00000452447 SLC15A4Q8N697 577 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 DOK4Q8TEW6 326 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 CA5BP1Q8WTZ4 195 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 NSUN5Q96P11 429 aaKnown RBP11.92□□□□□ -0.5
CHD3-206ENST00000452447 DMRTA2Q96SC8 542 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 TTTY12Q9BZ98 90 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 IL1RL2Q9HB29 575 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 ZBTB26Q9HCK0 441 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 PLSCR2Q9NRY7 297 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 NFU1Q9UMS0 254 aa11.92□□□□□ -0.5
CHD3-206ENST00000452447 A0A0G2JMM0 328 aa11.91□□□□□ -0.5
CHD3-206ENST00000452447 A0A1W2PPB8 328 aa11.91□□□□□ -0.5
CHD3-206ENST00000452447 A0A1W2PRS3 328 aa11.91□□□□□ -0.5
CHD3-206ENST00000452447 ENO4A6NNW6 628 aa11.91□□□□□ -0.5
CHD3-206ENST00000452447 KIR3DP1A8MWS1 328 aa11.91□□□□□ -0.5
CHD3-206ENST00000452447 ADAM10O14672 748 aa11.91□□□□□ -0.5
CHD3-206ENST00000452447 OTCP00480 354 aa11.91□□□□□ -0.5
CHD3-206ENST00000452447 KLK1P06870 262 aa11.91□□□□□ -0.5
CHD3-206ENST00000452447 SLC35E2P0CK97 266 aa11.91□□□□□ -0.5
CHD3-206ENST00000452447 CCL3P10147 92 aa11.91□□□□□ -0.5
CHD3-206ENST00000452447 PIK3R1P27986 724 aa11.91□□□□□ -0.5
CHD3-206ENST00000452447 PTGER4P35408 488 aa11.91□□□□□ -0.5
CHD3-206ENST00000452447 TBL3Q12788 808 aaKnown RBP11.91□□□□□ -0.5
CHD3-206ENST00000452447 SPRED3Q2MJR0 410 aa11.91□□□□□ -0.5
CHD3-206ENST00000452447 GGTA1PQ4G0N0 100 aa11.91□□□□□ -0.5
CHD3-206ENST00000452447 SGO1Q5FBB7 561 aa11.91□□□□□ -0.5
CHD3-206ENST00000452447 CCNYL2Q5T2Q4 361 aa11.91□□□□□ -0.5
CHD3-206ENST00000452447 SLC22A10Q63ZE4 541 aa11.91□□□□□ -0.5
CHD3-206ENST00000452447 TMEM211Q6ICI0 200 aa11.91□□□□□ -0.5
CHD3-206ENST00000452447 IFT20Q8IY31 132 aa11.91□□□□□ -0.5
CHD3-206ENST00000452447 DND1Q8IYX4 353 aaKnown RBP11.91□□□□□ -0.5
CHD3-206ENST00000452447 FAM109AQ8N4B1 249 aa11.91□□□□□ -0.5
CHD3-206ENST00000452447 CEP112Q8N8E3 955 aa11.91□□□□□ -0.5
CHD3-206ENST00000452447 OR4F6Q8NGB9 312 aa11.91□□□□□ -0.5
CHD3-206ENST00000452447 SDCCAG3Q96C92 435 aa11.91□□□□□ -0.5
CHD3-206ENST00000452447 SPACA9Q96E40 222 aaPredicted RBP11.91□□□□□ -0.5
CHD3-206ENST00000452447 TP63Q9H3D4 680 aaPredicted RBP11.91□□□□□ -0.5
CHD3-206ENST00000452447 ZDHHC11Q9H8X9 412 aa11.91□□□□□ -0.5
CHD3-206ENST00000452447 OR6C76A6NM76 312 aa11.9□□□□□ -0.5
CHD3-206ENST00000452447 A8MT66 165 aa11.9□□□□□ -0.5
CHD3-206ENST00000452447 NPIPA2E9PIF3 369 aa11.9□□□□□ -0.5
CHD3-206ENST00000452447 NPIPA3F8WFD2 350 aa11.9□□□□□ -0.5
CHD3-206ENST00000452447 PGRMC2O15173 223 aa11.9□□□□□ -0.5
CHD3-206ENST00000452447 GUCY1B2O75343 617 aa11.9□□□□□ -0.5
CHD3-206ENST00000452447 RPS17P08708 135 aaKnown RBP11.9□□□□□ -0.5
CHD3-206ENST00000452447 TAC1P20366 129 aa11.9□□□□□ -0.5
CHD3-206ENST00000452447 TNFRSF8P28908 595 aa11.9□□□□□ -0.5
CHD3-206ENST00000452447 SERPINB3P29508 390 aa11.9□□□□□ -0.5
CHD3-206ENST00000452447 GALNSP34059 522 aa11.9□□□□□ -0.5
CHD3-206ENST00000452447 DNASE1L1P49184 302 aa11.9□□□□□ -0.5
CHD3-206ENST00000452447 CDH13P55290 713 aa11.9□□□□□ -0.5
CHD3-206ENST00000452447 CDSNQ15517 529 aa11.9□□□□□ -0.5
CHD3-206ENST00000452447 ZNF791Q3KP31 576 aaPredicted RBP11.9□□□□□ -0.5
CHD3-206ENST00000452447 TRMT10CQ7L0Y3 403 aaKnown RBP11.9□□□□□ -0.5
CHD3-206ENST00000452447 GDF7Q7Z4P5 450 aa11.9□□□□□ -0.5
CHD3-206ENST00000452447 FAM13CQ8NE31 585 aa11.9□□□□□ -0.5
CHD3-206ENST00000452447 OR4K14Q8NGD5 310 aa11.9□□□□□ -0.5
CHD3-206ENST00000452447 SELENOMQ8WWX9 145 aa11.9□□□□□ -0.5
CHD3-206ENST00000452447 MTBPQ96DY7 904 aa11.9□□□□□ -0.5
CHD3-206ENST00000452447 MRPL1Q9BYD6 325 aaKnown RBP11.9□□□□□ -0.5
CHD3-206ENST00000452447 WWTR1Q9GZV5 400 aa11.9□□□□□ -0.5
CHD3-206ENST00000452447 LDAHQ9H6V9 325 aa11.9□□□□□ -0.5
CHD3-206ENST00000452447 RYDENQ9NUL5 291 aaKnown RBP11.9□□□□□ -0.5
CHD3-206ENST00000452447 NMRK1Q9NWW6 199 aa11.9□□□□□ -0.5
CHD3-206ENST00000452447 TEX10Q9NXF1 929 aaPredicted RBP11.9□□□□□ -0.5
CHD3-206ENST00000452447 ADAM29Q9UKF5 820 aa11.9□□□□□ -0.5
CHD3-206ENST00000452447 SNX6Q9UNH7 406 aa11.9□□□□□ -0.5
CHD3-206ENST00000452447 CCDC168Q8NDH2 2452 aa11.9□□□□□ -0.5
CHD3-206ENST00000452447 C2orf92A0A1B0GVN3 265 aa11.89□□□□□ -0.51
CHD3-206ENST00000452447 ATP6AP2A0A1C7CYW4 349 aa11.89□□□□□ -0.51
CHD3-206ENST00000452447 ATP6AP2O75787 350 aa11.89□□□□□ -0.51
CHD3-206ENST00000452447 GLSO94925 669 aaPredicted RBP11.89□□□□□ -0.51
CHD3-206ENST00000452447 ABHD2P08910 425 aa11.89□□□□□ -0.51
CHD3-206ENST00000452447 TSPAN8P19075 237 aa11.89□□□□□ -0.51
CHD3-206ENST00000452447 MAGEA5P43359 124 aa11.89□□□□□ -0.51
CHD3-206ENST00000452447 MAPK12P53778 367 aa11.89□□□□□ -0.51
CHD3-206ENST00000452447 SLC37A1P57057 533 aa11.89□□□□□ -0.51
CHD3-206ENST00000452447 KCNJ2P63252 427 aa11.89□□□□□ -0.51
CHD3-206ENST00000452447 SLC10A1Q14973 349 aa11.89□□□□□ -0.51
CHD3-206ENST00000452447 GXYLT1Q4G148 440 aa11.89□□□□□ -0.51
CHD3-206ENST00000452447 C6orf163Q5TEZ5 329 aa11.89□□□□□ -0.51
CHD3-206ENST00000452447 HLA-DQA1Q5Y7H0 255 aa11.89□□□□□ -0.51
CHD3-206ENST00000452447 RPS27LQ71UM5 84 aaKnown RBP11.89□□□□□ -0.51
CHD3-206ENST00000452447 GALNT12Q8IXK2 581 aa11.89□□□□□ -0.51
CHD3-206ENST00000452447 TAGAPQ8N103 731 aa11.89□□□□□ -0.51
CHD3-206ENST00000452447 TMEM251Q8N6I4 163 aa11.89□□□□□ -0.51
CHD3-206ENST00000452447 MYRIPQ8NFW9 859 aa11.89□□□□□ -0.51
CHD3-206ENST00000452447 ZNF483Q8TF39 744 aaPredicted RBP11.89□□□□□ -0.51
CHD3-206ENST00000452447 UCN3Q969E3 161 aa11.89□□□□□ -0.51
CHD3-206ENST00000452447 SMC6Q96SB8 1091 aa11.89□□□□□ -0.51
CHD3-206ENST00000452447 BRF2Q9HAW0 419 aa11.89□□□□□ -0.51
CHD3-206ENST00000452447 TUBA8Q9NY65 449 aaPredicted RBP11.89□□□□□ -0.51
CHD3-206ENST00000452447 CNIH4Q9P003 139 aa11.89□□□□□ -0.51
CHD3-206ENST00000452447 BOKQ9UMX3 212 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms