RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 CNEP1R1Q8N9A8 125 aa7.11□□□□□ -1.27
LINC01961-201ENST00000449954 TC2NQ8N9U0 490 aa7.11□□□□□ -1.27
LINC01961-201ENST00000449954 FAM13CQ8NE31 585 aa7.11□□□□□ -1.27
LINC01961-201ENST00000449954 OR14A16Q8NHC5 309 aa7.11□□□□□ -1.27
LINC01961-201ENST00000449954 FBF1Q8TES7 1133 aa7.11□□□□□ -1.27
LINC01961-201ENST00000449954 ZNF480Q8WV37 535 aa7.11□□□□□ -1.27
LINC01961-201ENST00000449954 TRAF4Q9BUZ4 470 aaPredicted RBP7.11□□□□□ -1.27
LINC01961-201ENST00000449954 OPN3Q9H1Y3 402 aaPredicted RBP7.11□□□□□ -1.27
LINC01961-201ENST00000449954 MANSC1Q9H8J5 431 aa7.11□□□□□ -1.27
LINC01961-201ENST00000449954 COPS7AQ9UBW8 275 aa7.11□□□□□ -1.27
LINC01961-201ENST00000449954 PTBP2Q9UKA9 531 aaKnown RBP7.11□□□□□ -1.27
LINC01961-201ENST00000449954 C15orf41Q9Y2V0 281 aa7.11□□□□□ -1.27
LINC01961-201ENST00000449954 CCDC162PA2VCL2 907 aa7.1□□□□□ -1.27
LINC01961-201ENST00000449954 URADA6NGE7 173 aa7.1□□□□□ -1.27
LINC01961-201ENST00000449954 LRRC53A6NM62 1247 aa7.1□□□□□ -1.27
LINC01961-201ENST00000449954 LGALS16A8MUM7 142 aa7.1□□□□□ -1.27
LINC01961-201ENST00000449954 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.1□□□□□ -1.27
LINC01961-201ENST00000449954 TRIM77I1YAP6 450 aa7.1□□□□□ -1.27
LINC01961-201ENST00000449954 FBXO24O75426 580 aa7.1□□□□□ -1.27
LINC01961-201ENST00000449954 PSIP1O75475 530 aaKnown RBP7.1□□□□□ -1.27
LINC01961-201ENST00000449954 SNX4O95219 450 aa7.1□□□□□ -1.27
LINC01961-201ENST00000449954 ACSL3O95573 720 aa7.1□□□□□ -1.27
LINC01961-201ENST00000449954 PSMB4P28070 264 aa7.1□□□□□ -1.27
LINC01961-201ENST00000449954 PPP2R1BP30154 601 aa7.1□□□□□ -1.27
LINC01961-201ENST00000449954 LIMS1P48059 325 aa7.1□□□□□ -1.27
LINC01961-201ENST00000449954 NAGLUP54802 743 aa7.1□□□□□ -1.27
LINC01961-201ENST00000449954 RGS1Q08116 209 aa7.1□□□□□ -1.27
LINC01961-201ENST00000449954 KLHL30Q0D2K2 578 aa7.1□□□□□ -1.27
LINC01961-201ENST00000449954 TFDP2Q14188 446 aa7.1□□□□□ -1.27
LINC01961-201ENST00000449954 POU6F1Q14863 301 aa7.1□□□□□ -1.27
LINC01961-201ENST00000449954 TOMM20Q15388 145 aa7.1□□□□□ -1.27
LINC01961-201ENST00000449954 RPS6KA1Q15418 735 aa7.1□□□□□ -1.27
LINC01961-201ENST00000449954 PGGHGQ32M88 737 aa7.1□□□□□ -1.27
LINC01961-201ENST00000449954 ZNF672Q499Z4 452 aaPredicted RBP7.1□□□□□ -1.27
LINC01961-201ENST00000449954 ODF2Q5BJF6 829 aa7.1□□□□□ -1.27
LINC01961-201ENST00000449954 CDKAL1Q5VV42 579 aa7.1□□□□□ -1.27
LINC01961-201ENST00000449954 CPNE8Q86YQ8 564 aa7.1□□□□□ -1.27
LINC01961-201ENST00000449954 MFSD9Q8NBP5 474 aa7.1□□□□□ -1.27
LINC01961-201ENST00000449954 PPFIBP2Q8ND30 876 aa7.1□□□□□ -1.27
LINC01961-201ENST00000449954 NUP43Q8NFH3 380 aa7.1□□□□□ -1.27
LINC01961-201ENST00000449954 LILRB1Q8NHL6 650 aaPredicted RBP7.1□□□□□ -1.27
LINC01961-201ENST00000449954 NUBPLQ8TB37 319 aa7.1□□□□□ -1.27
LINC01961-201ENST00000449954 C10orf105Q8TEF2 133 aa7.1□□□□□ -1.27
LINC01961-201ENST00000449954 P3H4Q92791 437 aa7.1□□□□□ -1.27
LINC01961-201ENST00000449954 ZNF845Q96IR2 970 aaPredicted RBP7.1□□□□□ -1.27
LINC01961-201ENST00000449954 PKP4Q99569 1192 aa7.1□□□□□ -1.27
LINC01961-201ENST00000449954 KLHL4Q9C0H6 718 aa7.1□□□□□ -1.27
LINC01961-201ENST00000449954 PCBD2Q9H0N5 130 aa7.1□□□□□ -1.27
LINC01961-201ENST00000449954 OR10A4Q9H209 315 aa7.1□□□□□ -1.27
LINC01961-201ENST00000449954 CCDC177Q9NQR7 707 aaPredicted RBP7.1□□□□□ -1.27
LINC01961-201ENST00000449954 HOMER3Q9NSC5 361 aa7.1□□□□□ -1.27
LINC01961-201ENST00000449954 ABCF3Q9NUQ8 709 aa7.1□□□□□ -1.27
LINC01961-201ENST00000449954 CNOT11Q9UKZ1 510 aaKnown RBP7.1□□□□□ -1.27
LINC01961-201ENST00000449954 MRPS33Q9Y291 106 aaKnown RBP7.1□□□□□ -1.27
LINC01961-201ENST00000449954 MROH6A6NGR9 719 aa7.09□□□□□ -1.27
LINC01961-201ENST00000449954 CLOCKO15516 846 aa7.09□□□□□ -1.27
LINC01961-201ENST00000449954 EMC8O43402 210 aa7.09□□□□□ -1.27
LINC01961-201ENST00000449954 HCRTR2O43614 444 aa7.09□□□□□ -1.27
LINC01961-201ENST00000449954 STK10O94804 968 aaKnown RBP7.09□□□□□ -1.27
LINC01961-201ENST00000449954 GOT2P00505 430 aaKnown RBP7.09□□□□□ -1.27
LINC01961-201ENST00000449954 KRT1P04264 644 aa7.09□□□□□ -1.27
LINC01961-201ENST00000449954 ZNF888P0CJ79 500 aaPredicted RBP7.09□□□□□ -1.27
LINC01961-201ENST00000449954 PECAM1P16284 738 aaPredicted RBP7.09□□□□□ -1.27
LINC01961-201ENST00000449954 SERPINB3P29508 390 aa7.09□□□□□ -1.27
LINC01961-201ENST00000449954 MASP1P48740 699 aa7.09□□□□□ -1.27
LINC01961-201ENST00000449954 UBXN1Q04323 297 aa7.09□□□□□ -1.27
LINC01961-201ENST00000449954 ASPHQ12797 758 aa7.09□□□□□ -1.27
LINC01961-201ENST00000449954 SLC13A2Q13183 592 aa7.09□□□□□ -1.27
LINC01961-201ENST00000449954 GBX1Q14549 363 aa7.09□□□□□ -1.27
LINC01961-201ENST00000449954 DPCR1Q3MIW9 517 aa7.09□□□□□ -1.27
LINC01961-201ENST00000449954 EIPR1Q53HC9 387 aa7.09□□□□□ -1.27
LINC01961-201ENST00000449954 FASTKD1Q53R41 847 aaKnown RBP7.09□□□□□ -1.27
LINC01961-201ENST00000449954 DEF8Q6ZN54 512 aa7.09□□□□□ -1.27
LINC01961-201ENST00000449954 P4HA3Q7Z4N8 544 aa7.09□□□□□ -1.27
LINC01961-201ENST00000449954 STRA8Q7Z7C7 330 aa7.09□□□□□ -1.27
LINC01961-201ENST00000449954 C17orf64Q86WR6 236 aa7.09□□□□□ -1.27
LINC01961-201ENST00000449954 LRRC6Q86X45 466 aa7.09□□□□□ -1.27
LINC01961-201ENST00000449954 ZNF525Q8N782 197 aa7.09□□□□□ -1.27
LINC01961-201ENST00000449954 OR10G3Q8NGC4 313 aa7.09□□□□□ -1.27
LINC01961-201ENST00000449954 RAB3IL1Q8TBN0 382 aa7.09□□□□□ -1.27
LINC01961-201ENST00000449954 ZNF418Q8TF45 676 aaPredicted RBP7.09□□□□□ -1.27
LINC01961-201ENST00000449954 TACO1Q9BSH4 297 aaKnown RBP7.09□□□□□ -1.27
LINC01961-201ENST00000449954 G6PC3Q9BUM1 346 aa7.09□□□□□ -1.27
LINC01961-201ENST00000449954 NTMT1Q9BV86 223 aa7.09□□□□□ -1.27
LINC01961-201ENST00000449954 OR8D2Q9GZM6 311 aa7.09□□□□□ -1.27
LINC01961-201ENST00000449954 RHBGQ9H310 441 aa7.09□□□□□ -1.27
LINC01961-201ENST00000449954 FANCFQ9NPI8 374 aa7.09□□□□□ -1.27
LINC01961-201ENST00000449954 PRTFDC1Q9NRG1 225 aa7.09□□□□□ -1.27
LINC01961-201ENST00000449954 ZNF148Q9UQR1 794 aa7.09□□□□□ -1.27
LINC01961-201ENST00000449954 DLGAP4Q9Y2H0 992 aa7.09□□□□□ -1.27
LINC01961-201ENST00000449954 R3HDM2Q9Y2K5 976 aaKnown RBP7.09□□□□□ -1.27
LINC01961-201ENST00000449954 PCDHGB1Q9Y5G3 927 aa7.09□□□□□ -1.27
LINC01961-201ENST00000449954 CLDN16Q9Y5I7 305 aa7.09□□□□□ -1.27
LINC01961-201ENST00000449954 KRTAP9-6A0A140TA67 174 aa7.08□□□□□ -1.28
LINC01961-201ENST00000449954 NRDCO43847 1150 aa7.08□□□□□ -1.28
LINC01961-201ENST00000449954 LCMT2O60294 686 aaKnown RBP7.08□□□□□ -1.28
LINC01961-201ENST00000449954 TGFAP01135 160 aa7.08□□□□□ -1.28
LINC01961-201ENST00000449954 CGAP01215 116 aa7.08□□□□□ -1.28
LINC01961-201ENST00000449954 ALDOAP04075 364 aaKnown RBP7.08□□□□□ -1.28
LINC01961-201ENST00000449954 IFNA16P05015 189 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms