RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 MTERF3Q96E29 417 aa7.07□□□□□ -1.28
AC004540.1-206ENST00000448056 RBM18Q96H35 190 aaKnown RBP7.07□□□□□ -1.28
AC004540.1-206ENST00000448056 MARK4Q96L34 752 aa7.07□□□□□ -1.28
AC004540.1-206ENST00000448056 TEX37Q96LM6 180 aa7.07□□□□□ -1.28
AC004540.1-206ENST00000448056 ZNF681Q96N22 645 aa7.07□□□□□ -1.28
AC004540.1-206ENST00000448056 CATSPER2Q96P56 530 aa7.07□□□□□ -1.28
AC004540.1-206ENST00000448056 PRPF18Q99633 342 aaKnown RBP7.07□□□□□ -1.28
AC004540.1-206ENST00000448056 MESP1Q9BRJ9 268 aa7.07□□□□□ -1.28
AC004540.1-206ENST00000448056 DPY30Q9C005 99 aa7.07□□□□□ -1.28
AC004540.1-206ENST00000448056 RABEP2Q9H5N1 569 aa7.07□□□□□ -1.28
AC004540.1-206ENST00000448056 SLC35C2Q9NQQ7 365 aa7.07□□□□□ -1.28
AC004540.1-206ENST00000448056 SDR39U1Q9NRG7 319 aaPredicted RBP7.07□□□□□ -1.28
AC004540.1-206ENST00000448056 C5AR2Q9P296 337 aa7.07□□□□□ -1.28
AC004540.1-206ENST00000448056 UTS2RQ9UKP6 389 aa7.07□□□□□ -1.28
AC004540.1-206ENST00000448056 TRIM33Q9UPN9 1127 aa7.07□□□□□ -1.28
AC004540.1-206ENST00000448056 MAPRE3Q9UPY8 281 aa7.07□□□□□ -1.28
AC004540.1-206ENST00000448056 HS3ST3B1Q9Y662 390 aa7.07□□□□□ -1.28
AC004540.1-206ENST00000448056 ZNF780BQ9Y6R6 833 aa7.07□□□□□ -1.28
AC004540.1-206ENST00000448056 FER1L5A0AVI2 2057 aa7.07□□□□□ -1.28
AC004540.1-206ENST00000448056 A0A087WV48 116 aa7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 A0A1W2PS29 197 aa7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 SYNDIG1LA6NDD5 238 aa7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 ZNF891A8MT65 544 aaPredicted RBP7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 SOCS6O14544 535 aa7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 SCAMP2O15127 329 aaKnown RBP7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 MAN1A2O60476 641 aa7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 ERAL1O75616 437 aaKnown RBP7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 FAM107AO95990 144 aa7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 LAMP1P11279 417 aa7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 CPMP14384 443 aa7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 COX7A2P14406 83 aa7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 PORP16435 677 aaPredicted RBP7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 CSNK2A2P19784 350 aaPredicted RBP7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 IL12AP29459 219 aa7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 OTX2P32243 289 aa7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 MPIP34949 423 aa7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 HPCAL1P37235 193 aa7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 RPL3P39023 403 aaKnown RBP7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 FEN1P39748 380 aaKnown RBP7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 ATP4BP51164 291 aa7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 CLNS1AP54105 237 aaKnown RBP7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 OR4D2P58180 307 aa7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 TLE3Q04726 772 aa7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 SRSF11Q05519 484 aaKnown RBP7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 PGS1Q32NB8 556 aa7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 SFT2D3Q587I9 215 aa7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 ANKRD26P1Q6NSI1 321 aa7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 FAM180BQ6P0A1 224 aa7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 PAOXQ6QHF9 649 aa7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 LRRC69Q6ZNQ3 347 aa7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 LANCL3Q6ZV70 420 aa7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 NDUFAF7Q7L592 441 aa7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 CPEB2Q7Z5Q1 589 aaKnown RBP7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 CAMKMTQ7Z624 323 aa7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 SAMD14Q8IZD0 417 aaPredicted RBP7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 ZSCAN1Q8NBB4 408 aa7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 OR11G2Q8NGC1 345 aa7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 PTPMT1Q8WUK0 201 aaPredicted RBP7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 ZCCHC14Q8WYQ9 949 aaKnown RBP7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 PPWD1Q96BP3 646 aaKnown RBP7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 TESCQ96BS2 214 aa7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 C8orf44Q96CB5 159 aa7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 KLHL29Q96CT2 875 aa7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 CNRIP1Q96F85 164 aaPredicted RBP7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 ZNF764Q96H86 408 aaPredicted RBP7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 IP6K3Q96PC2 410 aa7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 ZNF700Q9H0M5 742 aa7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 TSPAN10Q9H1Z9 355 aaPredicted RBP7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 ZNF385DQ9H6B1 395 aa7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 CLMPQ9H6B4 373 aa7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 MIEF1Q9NQG6 463 aa7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 PNO1Q9NRX1 252 aaKnown RBP7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 ZIM2Q9NZV7 527 aa7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 SH3BP4Q9P0V3 963 aa7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 C19orf25Q9UFG5 118 aaPredicted RBP7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 COPG1Q9Y678 874 aaKnown RBP7.06□□□□□ -1.28
AC004540.1-206ENST00000448056 URB1O60287 2271 aaKnown RBP7.05□□□□□ -1.28
AC004540.1-206ENST00000448056 IGHV1-45A0A0A0MS14 117 aa7.05□□□□□ -1.28
AC004540.1-206ENST00000448056 IGHV3-20A0A0C4DH32 117 aa7.05□□□□□ -1.28
AC004540.1-206ENST00000448056 A0A1W2PQ72 361 aa7.05□□□□□ -1.28
AC004540.1-206ENST00000448056 FAM234BA2RU67 622 aa7.05□□□□□ -1.28
AC004540.1-206ENST00000448056 CDC14CA4D256 554 aa7.05□□□□□ -1.28
AC004540.1-206ENST00000448056 A8MUA0 341 aa7.05□□□□□ -1.28
AC004540.1-206ENST00000448056 MYO1GB0I1T2 1018 aa7.05□□□□□ -1.28
AC004540.1-206ENST00000448056 PEX12O00623 359 aa7.05□□□□□ -1.28
AC004540.1-206ENST00000448056 OR10H2O60403 315 aa7.05□□□□□ -1.28
AC004540.1-206ENST00000448056 IFNA16P05015 189 aa7.05□□□□□ -1.28
AC004540.1-206ENST00000448056 ATP1B1P05026 303 aa7.05□□□□□ -1.28
AC004540.1-206ENST00000448056 IL6P05231 212 aa7.05□□□□□ -1.28
AC004540.1-206ENST00000448056 PRKAR1AP10644 381 aa7.05□□□□□ -1.28
AC004540.1-206ENST00000448056 DDX5P17844 614 aaKnown RBP7.05□□□□□ -1.28
AC004540.1-206ENST00000448056 TNNI3P19429 210 aa7.05□□□□□ -1.28
AC004540.1-206ENST00000448056 ITPKBP27987 946 aa7.05□□□□□ -1.28
AC004540.1-206ENST00000448056 GALNSP34059 522 aa7.05□□□□□ -1.28
AC004540.1-206ENST00000448056 FRKP42685 505 aaPredicted RBP7.05□□□□□ -1.28
AC004540.1-206ENST00000448056 STT3AP46977 705 aa7.05□□□□□ -1.28
AC004540.1-206ENST00000448056 ZFP36L2P47974 494 aaKnown RBP7.05□□□□□ -1.28
AC004540.1-206ENST00000448056 POLR2JP52435 117 aaKnown RBP7.05□□□□□ -1.28
AC004540.1-206ENST00000448056 STX1BP61266 288 aa7.05□□□□□ -1.28
AC004540.1-206ENST00000448056 PHC1P78364 1004 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms