RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 METTL2AQ96IZ6 378 aaKnown RBP15.25■□□□□ 0.03
SF3A1-204ENST00000447376 CNPPD1Q9BV87 410 aa15.25■□□□□ 0.03
SF3A1-204ENST00000447376 TNFRSF12AQ9NP84 129 aa15.25■□□□□ 0.03
SF3A1-204ENST00000447376 GIMAP4Q9NUV9 329 aa15.25■□□□□ 0.03
SF3A1-204ENST00000447376 ASF1BQ9NVP2 202 aa15.25■□□□□ 0.03
SF3A1-204ENST00000447376 ANKRD10Q9NXR5 420 aa15.25■□□□□ 0.03
SF3A1-204ENST00000447376 LRFN1Q9P244 771 aa15.25■□□□□ 0.03
SF3A1-204ENST00000447376 YARS2Q9Y2Z4 477 aaKnown RBP15.25■□□□□ 0.03
SF3A1-204ENST00000447376 RAP2CQ9Y3L5 183 aa15.25■□□□□ 0.03
SF3A1-204ENST00000447376 PCDHGB6Q9Y5F9 930 aa15.25■□□□□ 0.03
SF3A1-204ENST00000447376 CLDN16Q9Y5I7 305 aa15.25■□□□□ 0.03
SF3A1-204ENST00000447376 ZNF780BQ9Y6R6 833 aa15.25■□□□□ 0.03
SF3A1-204ENST00000447376 CPAMD8Q8IZJ3 1885 aa15.25■□□□□ 0.03
SF3A1-204ENST00000447376 ITGA10O75578 1167 aa15.24■□□□□ 0.03
SF3A1-204ENST00000447376 ERAL1O75616 437 aaKnown RBP15.24■□□□□ 0.03
SF3A1-204ENST00000447376 GALNSP34059 522 aa15.24■□□□□ 0.03
SF3A1-204ENST00000447376 CD96P40200 585 aa15.24■□□□□ 0.03
SF3A1-204ENST00000447376 PPP2R2AP63151 447 aa15.24■□□□□ 0.03
SF3A1-204ENST00000447376 PRR30Q53SZ7 412 aaPredicted RBP15.24■□□□□ 0.03
SF3A1-204ENST00000447376 SLC29A4Q7RTT9 530 aa15.24■□□□□ 0.03
SF3A1-204ENST00000447376 SAMD14Q8IZD0 417 aaPredicted RBP15.24■□□□□ 0.03
SF3A1-204ENST00000447376 AGR3Q8TD06 166 aa15.24■□□□□ 0.03
SF3A1-204ENST00000447376 TWIST2Q8WVJ9 160 aa15.24■□□□□ 0.03
SF3A1-204ENST00000447376 ASB15Q8WXK1 588 aa15.24■□□□□ 0.03
SF3A1-204ENST00000447376 PPWD1Q96BP3 646 aaKnown RBP15.24■□□□□ 0.03
SF3A1-204ENST00000447376 MANSC1Q9H8J5 431 aa15.24■□□□□ 0.03
SF3A1-204ENST00000447376 THAP1Q9NVV9 213 aa15.24■□□□□ 0.03
SF3A1-204ENST00000447376 ZNF446Q9NWS9 450 aa15.24■□□□□ 0.03
SF3A1-204ENST00000447376 ZDHHC2Q9UIJ5 367 aa15.24■□□□□ 0.03
SF3A1-204ENST00000447376 ERVK-11Q9UQG0 969 aa15.24■□□□□ 0.03
SF3A1-204ENST00000447376 PCDHA9Q9Y5H5 950 aa15.24■□□□□ 0.03
SF3A1-204ENST00000447376 DNAJC15Q9Y5T4 150 aa15.24■□□□□ 0.03
SF3A1-204ENST00000447376 FASNP49327 2511 aaKnown RBP15.23■□□□□ 0.03
SF3A1-204ENST00000447376 PGRMC2O15173 223 aa15.23■□□□□ 0.03
SF3A1-204ENST00000447376 ITM2AO43736 263 aa15.23■□□□□ 0.03
SF3A1-204ENST00000447376 ANXA4P09525 319 aaPredicted RBP15.23■□□□□ 0.03
SF3A1-204ENST00000447376 DRD2P14416 443 aa15.23■□□□□ 0.03
SF3A1-204ENST00000447376 CHN1P15882 459 aa15.23■□□□□ 0.03
SF3A1-204ENST00000447376 PORP16435 677 aaPredicted RBP15.23■□□□□ 0.03
SF3A1-204ENST00000447376 TIA1P31483 386 aaKnown RBP eCLIP15.23■□□□□ 0.03
SF3A1-204ENST00000447376 HLCSP50747 726 aa15.23■□□□□ 0.03
SF3A1-204ENST00000447376 RPL14P50914 215 aaKnown RBP15.23■□□□□ 0.03
SF3A1-204ENST00000447376 XKP51811 444 aa15.23■□□□□ 0.03
SF3A1-204ENST00000447376 RNF4P78317 190 aa15.23■□□□□ 0.03
SF3A1-204ENST00000447376 BST1Q10588 318 aa15.23■□□□□ 0.03
SF3A1-204ENST00000447376 ZNF267Q14586 743 aaPredicted RBP15.23■□□□□ 0.03
SF3A1-204ENST00000447376 SPRED3Q2MJR0 410 aa15.23■□□□□ 0.03
SF3A1-204ENST00000447376 SLC48A1Q6P1K1 146 aa15.23■□□□□ 0.03
SF3A1-204ENST00000447376 RNF111Q6ZNA4 994 aa15.23■□□□□ 0.03
SF3A1-204ENST00000447376 GALNT12Q8IXK2 581 aa15.23■□□□□ 0.03
SF3A1-204ENST00000447376 GPALPP1Q8IXQ4 340 aa15.23■□□□□ 0.03
SF3A1-204ENST00000447376 CYP4Z2PQ8N1L4 340 aa15.23■□□□□ 0.03
SF3A1-204ENST00000447376 DNAJB8Q8NHS0 232 aa15.23■□□□□ 0.03
SF3A1-204ENST00000447376 CDC26Q8NHZ8 85 aa15.23■□□□□ 0.03
SF3A1-204ENST00000447376 FAM76AQ8TAV0 307 aa15.23■□□□□ 0.03
SF3A1-204ENST00000447376 GRHL3Q8TE85 626 aa15.23■□□□□ 0.03
SF3A1-204ENST00000447376 KLHL29Q96CT2 875 aa15.23■□□□□ 0.03
SF3A1-204ENST00000447376 SENP5Q96HI0 755 aaPredicted RBP15.23■□□□□ 0.03
SF3A1-204ENST00000447376 FBXL20Q96IG2 436 aa15.23■□□□□ 0.03
SF3A1-204ENST00000447376 RYDENQ9NUL5 291 aaKnown RBP15.23■□□□□ 0.03
SF3A1-204ENST00000447376 OLAHQ9NV23 265 aa15.23■□□□□ 0.03
SF3A1-204ENST00000447376 SIRT5Q9NXA8 310 aa15.23■□□□□ 0.03
SF3A1-204ENST00000447376 A8MVJ9 347 aa15.22■□□□□ 0.03
SF3A1-204ENST00000447376 TMEM233B4DJY2 109 aa15.22■□□□□ 0.03
SF3A1-204ENST00000447376 SEC22BO75396 215 aa15.22■□□□□ 0.03
SF3A1-204ENST00000447376 LYPLA1O75608 230 aaPredicted RBP15.22■□□□□ 0.03
SF3A1-204ENST00000447376 SLC25A12O75746 678 aa15.22■□□□□ 0.03
SF3A1-204ENST00000447376 DDAH2O95865 285 aa15.22■□□□□ 0.03
SF3A1-204ENST00000447376 LINC00032P0C843 101 aa15.22■□□□□ 0.03
SF3A1-204ENST00000447376 CSNK2A2P19784 350 aaPredicted RBP15.22■□□□□ 0.03
SF3A1-204ENST00000447376 NT5EP21589 574 aa15.22■□□□□ 0.03
SF3A1-204ENST00000447376 PRPH2P23942 346 aa15.22■□□□□ 0.03
SF3A1-204ENST00000447376 TRHRP34981 398 aaPredicted RBP15.22■□□□□ 0.03
SF3A1-204ENST00000447376 GPR143P51810 404 aa15.22■□□□□ 0.03
SF3A1-204ENST00000447376 ERVK-8P63133 956 aa15.22■□□□□ 0.03
SF3A1-204ENST00000447376 ZNF763Q0D2J5 394 aa15.22■□□□□ 0.03
SF3A1-204ENST00000447376 NR6A1Q15406 480 aa15.22■□□□□ 0.03
SF3A1-204ENST00000447376 MAPKAPK3Q16644 382 aa15.22■□□□□ 0.03
SF3A1-204ENST00000447376 UGT3A2Q3SY77 523 aa15.22■□□□□ 0.03
SF3A1-204ENST00000447376 HLA-DQA1Q5Y7H0 255 aa15.22■□□□□ 0.03
SF3A1-204ENST00000447376 SLC25A25Q6KCM7 469 aa15.22■□□□□ 0.03
SF3A1-204ENST00000447376 GALNT18Q6P9A2 607 aa15.22■□□□□ 0.03
SF3A1-204ENST00000447376 ARMC10Q8N2F6 343 aa15.22■□□□□ 0.03
SF3A1-204ENST00000447376 AMER2Q8N7J2 671 aa15.22■□□□□ 0.03
SF3A1-204ENST00000447376 SLC22A8Q8TCC7 542 aa15.22■□□□□ 0.03
SF3A1-204ENST00000447376 FAR1Q8WVX9 515 aa15.22■□□□□ 0.03
SF3A1-204ENST00000447376 TM4SF18Q96CE8 201 aa15.22■□□□□ 0.03
SF3A1-204ENST00000447376 C19orf60Q96EN9 201 aa15.22■□□□□ 0.03
SF3A1-204ENST00000447376 APIPQ96GX9 242 aa15.22■□□□□ 0.03
SF3A1-204ENST00000447376 NPAS2Q99743 824 aa15.22■□□□□ 0.03
SF3A1-204ENST00000447376 LRTM1Q9HBL6 345 aa15.22■□□□□ 0.03
SF3A1-204ENST00000447376 MED4Q9NPJ6 270 aa15.22■□□□□ 0.03
SF3A1-204ENST00000447376 KLHL1Q9NR64 748 aa15.22■□□□□ 0.03
SF3A1-204ENST00000447376 INTS9Q9NV88 658 aaKnown RBP15.22■□□□□ 0.03
SF3A1-204ENST00000447376 HPF1Q9NWY4 346 aa15.22■□□□□ 0.03
SF3A1-204ENST00000447376 C1orf109Q9NX04 203 aa15.22■□□□□ 0.03
SF3A1-204ENST00000447376 MYOTQ9UBF9 498 aa15.22■□□□□ 0.03
SF3A1-204ENST00000447376 ERVK-19Q9WJR5 959 aa15.22■□□□□ 0.03
SF3A1-204ENST00000447376 ENTPD4Q9Y227 616 aa15.22■□□□□ 0.03
SF3A1-204ENST00000447376 DLGAP4Q9Y2H0 992 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms