RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 C16orf78Q8WTQ4 265 aa13.77□□□□□ -0.21
HDAC4-204ENST00000446876 RIT1Q92963 219 aa13.77□□□□□ -0.21
HDAC4-204ENST00000446876 KLHL29Q96CT2 875 aa13.77□□□□□ -0.21
HDAC4-204ENST00000446876 C11orf24Q96F05 449 aaPredicted RBP13.77□□□□□ -0.21
HDAC4-204ENST00000446876 SCMH1Q96GD3 660 aa13.77□□□□□ -0.21
HDAC4-204ENST00000446876 FBXL20Q96IG2 436 aa13.77□□□□□ -0.21
HDAC4-204ENST00000446876 C5orf34Q96MH7 638 aa13.77□□□□□ -0.21
HDAC4-204ENST00000446876 BARD1Q99728 777 aaKnown RBP13.77□□□□□ -0.21
HDAC4-204ENST00000446876 PELOQ9BRX2 385 aaKnown RBP13.77□□□□□ -0.21
HDAC4-204ENST00000446876 TRMOQ9BU70 441 aa13.77□□□□□ -0.21
HDAC4-204ENST00000446876 TUBB1Q9H4B7 451 aa13.77□□□□□ -0.21
HDAC4-204ENST00000446876 RRAGDQ9NQL2 400 aaPredicted RBP13.77□□□□□ -0.21
HDAC4-204ENST00000446876 DLGAP4Q9Y2H0 992 aa13.77□□□□□ -0.21
HDAC4-204ENST00000446876 CCL27Q9Y4X3 112 aa13.77□□□□□ -0.21
HDAC4-204ENST00000446876 MYO18BQ8IUG5 2567 aa13.77□□□□□ -0.21
HDAC4-204ENST00000446876 PRRC2CQ9Y520 2896 aaKnown RBP13.76□□□□□ -0.21
HDAC4-204ENST00000446876 UBR5O95071 2799 aaPredicted RBP13.76□□□□□ -0.21
HDAC4-204ENST00000446876 DYRK3O43781 588 aa13.76□□□□□ -0.21
HDAC4-204ENST00000446876 SLC25A12O75746 678 aa13.76□□□□□ -0.21
HDAC4-204ENST00000446876 ANXA4P09525 319 aaPredicted RBP13.76□□□□□ -0.21
HDAC4-204ENST00000446876 CPMP14384 443 aa13.76□□□□□ -0.21
HDAC4-204ENST00000446876 NT5EP21589 574 aa13.76□□□□□ -0.21
HDAC4-204ENST00000446876 SSTR4P31391 388 aa13.76□□□□□ -0.21
HDAC4-204ENST00000446876 TRHRP34981 398 aaPredicted RBP13.76□□□□□ -0.21
HDAC4-204ENST00000446876 SSR4P51571 173 aa13.76□□□□□ -0.21
HDAC4-204ENST00000446876 TRA2BP62995 288 aaKnown RBP13.76□□□□□ -0.21
HDAC4-204ENST00000446876 BIKQ13323 160 aa13.76□□□□□ -0.21
HDAC4-204ENST00000446876 SPRED3Q2MJR0 410 aa13.76□□□□□ -0.21
HDAC4-204ENST00000446876 SH2D4BQ5SQS7 431 aa13.76□□□□□ -0.21
HDAC4-204ENST00000446876 GALNTL5Q7Z4T8 443 aa13.76□□□□□ -0.21
HDAC4-204ENST00000446876 TMEM156Q8N614 296 aa13.76□□□□□ -0.21
HDAC4-204ENST00000446876 OR2T11Q8NH01 316 aa13.76□□□□□ -0.21
HDAC4-204ENST00000446876 FAR1Q8WVX9 515 aa13.76□□□□□ -0.21
HDAC4-204ENST00000446876 GAL3ST4Q96RP7 486 aa13.76□□□□□ -0.21
HDAC4-204ENST00000446876 RASL10BQ96S79 203 aa13.76□□□□□ -0.21
HDAC4-204ENST00000446876 FAIM2Q9BWQ8 316 aa13.76□□□□□ -0.21
HDAC4-204ENST00000446876 CXorf21Q9HAI6 301 aa13.76□□□□□ -0.21
HDAC4-204ENST00000446876 KCNK9Q9NPC2 374 aa13.76□□□□□ -0.21
HDAC4-204ENST00000446876 AGPAT4Q9NRZ5 378 aa13.76□□□□□ -0.21
HDAC4-204ENST00000446876 OLAHQ9NV23 265 aa13.76□□□□□ -0.21
HDAC4-204ENST00000446876 MYOTQ9UBF9 498 aa13.76□□□□□ -0.21
HDAC4-204ENST00000446876 ZGRF1Q86YA3 2104 aa13.76□□□□□ -0.21
HDAC4-204ENST00000446876 LYPLA1O75608 230 aaPredicted RBP13.75□□□□□ -0.21
HDAC4-204ENST00000446876 RSL1D1O76021 490 aaKnown RBP13.75□□□□□ -0.21
HDAC4-204ENST00000446876 WISP2O76076 250 aa13.75□□□□□ -0.21
HDAC4-204ENST00000446876 OR6B1O95007 311 aa13.75□□□□□ -0.21
HDAC4-204ENST00000446876 RASAL1O95294 804 aa13.75□□□□□ -0.21
HDAC4-204ENST00000446876 CBX6O95503 412 aa13.75□□□□□ -0.21
HDAC4-204ENST00000446876 SP1P08047 785 aa13.75□□□□□ -0.21
HDAC4-204ENST00000446876 LINC00032P0C843 101 aa13.75□□□□□ -0.21
HDAC4-204ENST00000446876 CD46P15529 392 aa13.75□□□□□ -0.21
HDAC4-204ENST00000446876 PORP16435 677 aaPredicted RBP13.75□□□□□ -0.21
HDAC4-204ENST00000446876 SOX3P41225 446 aa13.75□□□□□ -0.21
HDAC4-204ENST00000446876 LTB4RQ15722 352 aa13.75□□□□□ -0.21
HDAC4-204ENST00000446876 INAQ16352 499 aa13.75□□□□□ -0.21
HDAC4-204ENST00000446876 MAPKAPK3Q16644 382 aa13.75□□□□□ -0.21
HDAC4-204ENST00000446876 EIF2S3LQ2VIR3 472 aaKnown RBP13.75□□□□□ -0.21
HDAC4-204ENST00000446876 SLC25A25Q6KCM7 469 aa13.75□□□□□ -0.21
HDAC4-204ENST00000446876 GALNT18Q6P9A2 607 aa13.75□□□□□ -0.21
HDAC4-204ENST00000446876 FAM111BQ6SJ93 734 aa13.75□□□□□ -0.21
HDAC4-204ENST00000446876 RNF111Q6ZNA4 994 aa13.75□□□□□ -0.21
HDAC4-204ENST00000446876 MDGA2Q7Z553 956 aa13.75□□□□□ -0.21
HDAC4-204ENST00000446876 NUDCD3Q8IVD9 361 aa13.75□□□□□ -0.21
HDAC4-204ENST00000446876 GALNT12Q8IXK2 581 aa13.75□□□□□ -0.21
HDAC4-204ENST00000446876 CYP4Z2PQ8N1L4 340 aa13.75□□□□□ -0.21
HDAC4-204ENST00000446876 BCORP1Q8N888 145 aa13.75□□□□□ -0.21
HDAC4-204ENST00000446876 C7orf57Q8NEG2 295 aa13.75□□□□□ -0.21
HDAC4-204ENST00000446876 ADCY4Q8NFM4 1077 aa13.75□□□□□ -0.21
HDAC4-204ENST00000446876 OR6Y1Q8NGX8 325 aa13.75□□□□□ -0.21
HDAC4-204ENST00000446876 OR8K3Q8NH51 312 aa13.75□□□□□ -0.21
HDAC4-204ENST00000446876 TWIST2Q8WVJ9 160 aa13.75□□□□□ -0.21
HDAC4-204ENST00000446876 ASB15Q8WXK1 588 aa13.75□□□□□ -0.21
HDAC4-204ENST00000446876 EXOSC8Q96B26 276 aaKnown RBP13.75□□□□□ -0.21
HDAC4-204ENST00000446876 CNRIP1Q96F85 164 aaPredicted RBP13.75□□□□□ -0.21
HDAC4-204ENST00000446876 PGM2Q96G03 612 aa13.75□□□□□ -0.21
HDAC4-204ENST00000446876 ART5Q96L15 291 aa13.75□□□□□ -0.21
HDAC4-204ENST00000446876 ZNF395Q9H8N7 513 aaPredicted RBP13.75□□□□□ -0.21
HDAC4-204ENST00000446876 TRIM45Q9H8W5 580 aaPredicted RBP13.75□□□□□ -0.21
HDAC4-204ENST00000446876 SSU72Q9NP77 194 aaKnown RBP13.75□□□□□ -0.21
HDAC4-204ENST00000446876 SIRT5Q9NXA8 310 aa13.75□□□□□ -0.21
HDAC4-204ENST00000446876 GIMAP2Q9UG22 337 aa13.75□□□□□ -0.21
HDAC4-204ENST00000446876 UTS2RQ9UKP6 389 aa13.75□□□□□ -0.21
HDAC4-204ENST00000446876 YARS2Q9Y2Z4 477 aaKnown RBP13.75□□□□□ -0.21
HDAC4-204ENST00000446876 TRAF6Q9Y4K3 522 aa13.75□□□□□ -0.21
HDAC4-204ENST00000446876 DNAJC15Q9Y5T4 150 aa13.75□□□□□ -0.21
HDAC4-204ENST00000446876 ANKUB1A6NFN9 424 aa13.74□□□□□ -0.21
HDAC4-204ENST00000446876 PIP5K1BO14986 540 aa13.74□□□□□ -0.21
HDAC4-204ENST00000446876 ITM2AO43736 263 aa13.74□□□□□ -0.21
HDAC4-204ENST00000446876 NME2P1O60361 137 aa13.74□□□□□ -0.21
HDAC4-204ENST00000446876 SEC22BO75396 215 aa13.74□□□□□ -0.21
HDAC4-204ENST00000446876 MYZAPP0CAP1 466 aa13.74□□□□□ -0.21
HDAC4-204ENST00000446876 NME2P22392 152 aa13.74□□□□□ -0.21
HDAC4-204ENST00000446876 MST1P26927 711 aa13.74□□□□□ -0.21
HDAC4-204ENST00000446876 GALNSP34059 522 aa13.74□□□□□ -0.21
HDAC4-204ENST00000446876 SLC37A1P57057 533 aa13.74□□□□□ -0.21
HDAC4-204ENST00000446876 SRSF1Q07955 248 aaKnown RBP eCLIP13.74□□□□□ -0.21
HDAC4-204ENST00000446876 ZNF763Q0D2J5 394 aa13.74□□□□□ -0.21
HDAC4-204ENST00000446876 CHI3L2Q15782 390 aa13.74□□□□□ -0.21
HDAC4-204ENST00000446876 PRSS53Q2L4Q9 553 aa13.74□□□□□ -0.21
HDAC4-204ENST00000446876 UGT3A2Q3SY77 523 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms