RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 PTDSS2Q9BVG9 487 aa4.94□□□□□ -1.62
SCN11A-202ENST00000444237 C20orf27Q9GZN8 174 aa4.94□□□□□ -1.62
SCN11A-202ENST00000444237 SLIRPQ9GZT3 109 aaKnown RBP4.94□□□□□ -1.62
SCN11A-202ENST00000444237 CPA4Q9UI42 421 aa4.94□□□□□ -1.62
SCN11A-202ENST00000444237 SLCO3A1Q9UIG8 710 aa4.94□□□□□ -1.62
SCN11A-202ENST00000444237 FBXL2Q9UKC9 423 aa4.94□□□□□ -1.62
SCN11A-202ENST00000444237 WTIPA6NIX2 430 aaPredicted RBP4.93□□□□□ -1.62
SCN11A-202ENST00000444237 ARVCFO00192 962 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 TGOLN2O43493 480 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 ZNF821O75541 412 aaPredicted RBP4.93□□□□□ -1.62
SCN11A-202ENST00000444237 GATBO75879 557 aaKnown RBP4.93□□□□□ -1.62
SCN11A-202ENST00000444237 SCG5P05408 212 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 NAGAP17050 411 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 C21orf33P30042 268 aaPredicted RBP4.93□□□□□ -1.62
SCN11A-202ENST00000444237 GCGRP47871 477 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 CAMLGP49069 296 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 CD81P60033 236 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 ZNF616Q08AN1 781 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 LBHQ53QV2 105 aaPredicted RBP4.93□□□□□ -1.62
SCN11A-202ENST00000444237 SPANXN4Q5MJ08 99 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 GPR139Q6DWJ6 353 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 KANSL1Q7Z3B3 1105 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 CCDC190Q86UF4 302 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 PROKR2Q8NFJ6 384 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 B3GNT7Q8NFL0 401 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 SEMA6DQ8NFY4 1073 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 OR10R2Q8NGX6 335 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 GPR21Q99679 349 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 NPAS1Q99742 590 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 ZDHHC5Q9C0B5 715 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 SLC39A8Q9C0K1 460 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 SLC6A16Q9GZN6 736 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 BCO1Q9HAY6 547 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 PRDM9Q9NQV7 894 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 CFAP97Q9P2B7 532 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 CYP8B1Q9UNU6 501 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 PCDHB11Q9Y5F2 797 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 DNMT3AQ9Y6K1 912 aaPredicted RBP4.93□□□□□ -1.62
SCN11A-202ENST00000444237 CSNK1G3Q9Y6M4 447 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 TRBC2A0A5B9 178 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 TTC24A2A3L6 582 aaPredicted RBP4.93□□□□□ -1.62
SCN11A-202ENST00000444237 FAM221BA6H8Z2 402 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 LRIT2A6NDA9 550 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 PSMD9O00233 223 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 ARHGAP33O14559 1287 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 ATG12O94817 140 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 OR6A2O95222 327 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 INHBBP09529 407 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 CBSLP0DN79 551 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 GLULP15104 373 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 HPGDP15428 266 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 CBSP35520 551 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 SOX3P41225 446 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 IDH3GP51553 393 aaPredicted RBP4.93□□□□□ -1.62
SCN11A-202ENST00000444237 OGDHQ02218 1023 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 ZNF273Q14593 569 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 FAM111BQ6SJ93 734 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 ENPP7Q6UWV6 458 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 KCTD9Q7L273 389 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 GPAT4Q86UL3 456 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 MRPL41Q8IXM3 137 aaKnown RBP4.93□□□□□ -1.62
SCN11A-202ENST00000444237 BEND7Q8N7W2 519 aaPredicted RBP4.93□□□□□ -1.62
SCN11A-202ENST00000444237 BOLLQ8N9W6 283 aaKnown RBP4.93□□□□□ -1.62
SCN11A-202ENST00000444237 IL17RCQ8NAC3 791 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 WDR48Q8TAF3 677 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 CORO2AQ92828 525 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 MICU1Q9BPX6 476 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 POPDC3Q9HBV1 291 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 SLC22A11Q9NSA0 550 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 DCAF13Q9NV06 445 aaKnown RBP4.93□□□□□ -1.62
SCN11A-202ENST00000444237 SMPD4Q9NXE4 827 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 UXTQ9UBK9 157 aaPredicted RBP4.93□□□□□ -1.62
SCN11A-202ENST00000444237 HYKKA2RU49 373 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 ERVH48-1M5A8F1 160 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 FAAHO00519 579 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 ECI2O75521 394 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 CDK14O94921 469 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 FGBP02675 491 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 ALPIP09923 528 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 SLC35E2BP0CK96 405 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 CPN1P15169 458 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 EFNA1P20827 205 aaPredicted RBP4.93□□□□□ -1.62
SCN11A-202ENST00000444237 ADH7P40394 386 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 ISL1P61371 349 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 SNRPEP62304 92 aaKnown RBP4.93□□□□□ -1.62
SCN11A-202ENST00000444237 PRR5P85299 388 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 GLO1Q04760 184 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 ZNF630Q2M218 657 aaPredicted RBP4.93□□□□□ -1.62
SCN11A-202ENST00000444237 LRIF1Q5T3J3 769 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 KIAA1324Q6UXG2 1013 aaKnown RBP4.93□□□□□ -1.62
SCN11A-202ENST00000444237 MAVSQ7Z434 540 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 RASGRP3Q8IV61 690 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 GID4Q8IVV7 300 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 GPRC5AQ8NFJ5 357 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 OR5T1Q8NG75 326 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 OR10H5Q8NGA6 315 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 OR10Q1Q8NGQ4 319 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 TSEN15Q8WW01 171 aaKnown RBP4.93□□□□□ -1.62
SCN11A-202ENST00000444237 SORCS1Q8WY21 1168 aa4.93□□□□□ -1.62
SCN11A-202ENST00000444237 RAB39BQ96DA2 213 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms