RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 CFAP157Q5JU67 520 aa19.51■□□□□ 0.71
CDKN3-204ENST00000442975 C6orf163Q5TEZ5 329 aa19.51■□□□□ 0.71
CDKN3-204ENST00000442975 SLC29A4Q7RTT9 530 aa19.51■□□□□ 0.71
CDKN3-204ENST00000442975 GALNT12Q8IXK2 581 aa19.51■□□□□ 0.71
CDKN3-204ENST00000442975 MMP21Q8N119 569 aa19.51■□□□□ 0.71
CDKN3-204ENST00000442975 POGLUT1Q8NBL1 392 aa19.51■□□□□ 0.71
CDKN3-204ENST00000442975 OR4K14Q8NGD5 310 aa19.51■□□□□ 0.71
CDKN3-204ENST00000442975 ACPTQ9BZG2 426 aa19.51■□□□□ 0.71
CDKN3-204ENST00000442975 C12orf65Q9H3J6 166 aaKnown RBP19.51■□□□□ 0.71
CDKN3-204ENST00000442975 MID1IP1Q9NPA3 183 aa19.51■□□□□ 0.71
CDKN3-204ENST00000442975 TIMM22Q9Y584 194 aa19.51■□□□□ 0.71
CDKN3-204ENST00000442975 SVILO95425 2214 aa19.51■□□□□ 0.71
CDKN3-204ENST00000442975 CCDC151A5D8V7 595 aa19.5■□□□□ 0.71
CDKN3-204ENST00000442975 WIPF3A6NGB9 483 aa19.5■□□□□ 0.71
CDKN3-204ENST00000442975 PLIN3O60664 434 aa19.5■□□□□ 0.71
CDKN3-204ENST00000442975 CRCPO75575 148 aa19.5■□□□□ 0.71
CDKN3-204ENST00000442975 ESRRBO95718 433 aa19.5■□□□□ 0.71
CDKN3-204ENST00000442975 SLC35E2P0CK97 266 aa19.5■□□□□ 0.71
CDKN3-204ENST00000442975 HSD3B1P14060 373 aa19.5■□□□□ 0.71
CDKN3-204ENST00000442975 NT5EP21589 574 aa19.5■□□□□ 0.71
CDKN3-204ENST00000442975 HSD3B2P26439 372 aa19.5■□□□□ 0.71
CDKN3-204ENST00000442975 ALDH9A1P49189 494 aa19.5■□□□□ 0.71
CDKN3-204ENST00000442975 IFFO1Q0D2I5 559 aa19.5■□□□□ 0.71
CDKN3-204ENST00000442975 CCDC153Q494R4 210 aa19.5■□□□□ 0.71
CDKN3-204ENST00000442975 KRTCAP3Q53RY4 240 aa19.5■□□□□ 0.71
CDKN3-204ENST00000442975 OPN5Q6U736 354 aa19.5■□□□□ 0.71
CDKN3-204ENST00000442975 RTL4Q6ZR62 310 aa19.5■□□□□ 0.71
CDKN3-204ENST00000442975 SH2D5Q6ZV89 423 aa19.5■□□□□ 0.71
CDKN3-204ENST00000442975 NUBPLQ8TB37 319 aa19.5■□□□□ 0.71
CDKN3-204ENST00000442975 SLC22A8Q8TCC7 542 aa19.5■□□□□ 0.71
CDKN3-204ENST00000442975 AGAP11Q8TF27 550 aa19.5■□□□□ 0.71
CDKN3-204ENST00000442975 SUCOQ9UBS9 1254 aaKnown RBP19.5■□□□□ 0.71
CDKN3-204ENST00000442975 GRID1Q9ULK0 1009 aa19.5■□□□□ 0.71
CDKN3-204ENST00000442975 A0A0G2JMM0 328 aa19.49■□□□□ 0.71
CDKN3-204ENST00000442975 A0A1W2PPB8 328 aa19.49■□□□□ 0.71
CDKN3-204ENST00000442975 A0A1W2PRS3 328 aa19.49■□□□□ 0.71
CDKN3-204ENST00000442975 KIR3DP1A8MWS1 328 aa19.49■□□□□ 0.71
CDKN3-204ENST00000442975 ZNHIT1O43257 154 aa19.49■□□□□ 0.71
CDKN3-204ENST00000442975 CDC40O60508 579 aaKnown RBP eCLIP19.49■□□□□ 0.71
CDKN3-204ENST00000442975 ZNF354AO60765 605 aaPredicted RBP19.49■□□□□ 0.71
CDKN3-204ENST00000442975 SLU7O95391 586 aaKnown RBP19.49■□□□□ 0.71
CDKN3-204ENST00000442975 SSTR4P31391 388 aa19.49■□□□□ 0.71
CDKN3-204ENST00000442975 CRHR1P34998 444 aa19.49■□□□□ 0.71
CDKN3-204ENST00000442975 DEKP35659 375 aaKnown RBP19.49■□□□□ 0.71
CDKN3-204ENST00000442975 XKP51811 444 aa19.49■□□□□ 0.71
CDKN3-204ENST00000442975 NAGLUP54802 743 aa19.49■□□□□ 0.71
CDKN3-204ENST00000442975 HMGCS1Q01581 520 aa19.49■□□□□ 0.71
CDKN3-204ENST00000442975 PLGLB1Q02325 96 aa19.49■□□□□ 0.71
CDKN3-204ENST00000442975 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.49■□□□□ 0.71
CDKN3-204ENST00000442975 ZNF750Q32MQ0 723 aa19.49■□□□□ 0.71
CDKN3-204ENST00000442975 SCIMPQ6UWF3 145 aa19.49■□□□□ 0.71
CDKN3-204ENST00000442975 MAMDC2Q7Z304 686 aaPredicted RBP19.49■□□□□ 0.71
CDKN3-204ENST00000442975 GHDCQ8N2G8 530 aa19.49■□□□□ 0.71
CDKN3-204ENST00000442975 KLHL29Q96CT2 875 aa19.49■□□□□ 0.71
CDKN3-204ENST00000442975 FAIM2Q9BWQ8 316 aa19.49■□□□□ 0.71
CDKN3-204ENST00000442975 WWTR1Q9GZV5 400 aa19.49■□□□□ 0.71
CDKN3-204ENST00000442975 IQCGQ9H095 443 aaKnown RBP19.49■□□□□ 0.71
CDKN3-204ENST00000442975 CXorf21Q9HAI6 301 aa19.49■□□□□ 0.71
CDKN3-204ENST00000442975 TINAGQ9UJW2 476 aa19.49■□□□□ 0.71
CDKN3-204ENST00000442975 PCDHA9Q9Y5H5 950 aa19.49■□□□□ 0.71
CDKN3-204ENST00000442975 C1orf226A1L170 272 aa19.48■□□□□ 0.71
CDKN3-204ENST00000442975 CCL21O00585 134 aa19.48■□□□□ 0.71
CDKN3-204ENST00000442975 UBFD1O14562 309 aaKnown RBP19.48■□□□□ 0.71
CDKN3-204ENST00000442975 ASNA1O43681 348 aa19.48■□□□□ 0.71
CDKN3-204ENST00000442975 HS6ST1O60243 411 aa19.48■□□□□ 0.71
CDKN3-204ENST00000442975 PCDH7O60245 1069 aa19.48■□□□□ 0.71
CDKN3-204ENST00000442975 ERAL1O75616 437 aaKnown RBP19.48■□□□□ 0.71
CDKN3-204ENST00000442975 CLDN1O95832 211 aa19.48■□□□□ 0.71
CDKN3-204ENST00000442975 CPMP14384 443 aa19.48■□□□□ 0.71
CDKN3-204ENST00000442975 CPA3P15088 417 aa19.48■□□□□ 0.71
CDKN3-204ENST00000442975 ABOP16442 354 aa19.48■□□□□ 0.71
CDKN3-204ENST00000442975 PTGER1P34995 402 aa19.48■□□□□ 0.71
CDKN3-204ENST00000442975 CA7P43166 264 aa19.48■□□□□ 0.71
CDKN3-204ENST00000442975 EBPQ15125 230 aaKnown RBP19.48■□□□□ 0.71
CDKN3-204ENST00000442975 C3AR1Q16581 482 aa19.48■□□□□ 0.71
CDKN3-204ENST00000442975 MPEG1Q2M385 716 aa19.48■□□□□ 0.71
CDKN3-204ENST00000442975 SLC48A1Q6P1K1 146 aa19.48■□□□□ 0.71
CDKN3-204ENST00000442975 FRMD7Q6ZUT3 714 aa19.48■□□□□ 0.71
CDKN3-204ENST00000442975 GBP7Q8N8V2 638 aaPredicted RBP19.48■□□□□ 0.71
CDKN3-204ENST00000442975 RDH11Q8TC12 318 aa19.48■□□□□ 0.71
CDKN3-204ENST00000442975 RELTQ969Z4 430 aa19.48■□□□□ 0.71
CDKN3-204ENST00000442975 DEPPQ9NTK1 212 aa19.48■□□□□ 0.71
CDKN3-204ENST00000442975 GNG14A0A1W2PPG7 69 aa19.47■□□□□ 0.71
CDKN3-204ENST00000442975 PINLYPA6NC86 204 aa19.47■□□□□ 0.71
CDKN3-204ENST00000442975 GOLGA6L10A6NI86 522 aa19.47■□□□□ 0.71
CDKN3-204ENST00000442975 FAM166BA8MTA8 275 aa19.47■□□□□ 0.71
CDKN3-204ENST00000442975 NUDT17P0C025 328 aa19.47■□□□□ 0.71
CDKN3-204ENST00000442975 FEN1P39748 380 aaKnown RBP19.47■□□□□ 0.71
CDKN3-204ENST00000442975 FOXA1P55317 472 aa19.47■□□□□ 0.71
CDKN3-204ENST00000442975 SLC37A1P57057 533 aa19.47■□□□□ 0.71
CDKN3-204ENST00000442975 BTKQ06187 659 aa19.47■□□□□ 0.71
CDKN3-204ENST00000442975 ACSM2AQ08AH3 577 aa19.47■□□□□ 0.71
CDKN3-204ENST00000442975 SPIN4Q56A73 249 aa19.47■□□□□ 0.71
CDKN3-204ENST00000442975 PIGGQ5H8A4 983 aa19.47■□□□□ 0.71
CDKN3-204ENST00000442975 ACSM2BQ68CK6 577 aa19.47■□□□□ 0.71
CDKN3-204ENST00000442975 ZFP62Q8NB50 900 aaPredicted RBP19.47■□□□□ 0.71
CDKN3-204ENST00000442975 OR2M7Q8NG81 312 aa19.47■□□□□ 0.71
CDKN3-204ENST00000442975 AENQ8WTP8 325 aaKnown RBP19.47■□□□□ 0.71
CDKN3-204ENST00000442975 TM4SF18Q96CE8 201 aa19.47■□□□□ 0.71
CDKN3-204ENST00000442975 SGCZQ96LD1 299 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms