RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 PLA2G16P53816 162 aa13.73□□□□□ -0.21
TNFRSF1A-204ENST00000440083 VSX2P58304 361 aaPredicted RBP13.73□□□□□ -0.21
TNFRSF1A-204ENST00000440083 MC1RQ01726 317 aa13.73□□□□□ -0.21
TNFRSF1A-204ENST00000440083 LRRC36Q1X8D7 754 aa13.73□□□□□ -0.21
TNFRSF1A-204ENST00000440083 ZNF385BQ569K4 471 aa13.73□□□□□ -0.21
TNFRSF1A-204ENST00000440083 OR4C11Q6IEV9 310 aa13.73□□□□□ -0.21
TNFRSF1A-204ENST00000440083 FBXO42Q6P3S6 717 aa13.73□□□□□ -0.21
TNFRSF1A-204ENST00000440083 ERICH5Q6P6B1 374 aa13.73□□□□□ -0.21
TNFRSF1A-204ENST00000440083 DTX1Q86Y01 620 aa13.73□□□□□ -0.21
TNFRSF1A-204ENST00000440083 TICAM1Q8IUC6 712 aa13.73□□□□□ -0.21
TNFRSF1A-204ENST00000440083 ADGRG5Q8IZF4 528 aa13.73□□□□□ -0.21
TNFRSF1A-204ENST00000440083 DTWD1Q8N5C7 304 aa13.73□□□□□ -0.21
TNFRSF1A-204ENST00000440083 ZNF655Q8N720 491 aaPredicted RBP13.73□□□□□ -0.21
TNFRSF1A-204ENST00000440083 ICA1LQ8NDH6 482 aa13.73□□□□□ -0.21
TNFRSF1A-204ENST00000440083 ADCY4Q8NFM4 1077 aa13.73□□□□□ -0.21
TNFRSF1A-204ENST00000440083 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.73□□□□□ -0.21
TNFRSF1A-204ENST00000440083 CANT1Q8WVQ1 401 aa13.73□□□□□ -0.21
TNFRSF1A-204ENST00000440083 NKD1Q969G9 470 aa13.73□□□□□ -0.21
TNFRSF1A-204ENST00000440083 SLCO4A1Q96BD0 722 aa13.73□□□□□ -0.21
TNFRSF1A-204ENST00000440083 CRELD1Q96HD1 420 aa13.73□□□□□ -0.21
TNFRSF1A-204ENST00000440083 REXO5Q96IC2 774 aaKnown RBP13.73□□□□□ -0.21
TNFRSF1A-204ENST00000440083 C17orf62Q9BQA9 187 aa13.73□□□□□ -0.21
TNFRSF1A-204ENST00000440083 SARGQ9BW04 601 aa13.73□□□□□ -0.21
TNFRSF1A-204ENST00000440083 SPATA9Q9BWV2 254 aa13.73□□□□□ -0.21
TNFRSF1A-204ENST00000440083 IKZF5Q9H5V7 419 aa13.73□□□□□ -0.21
TNFRSF1A-204ENST00000440083 KAT8Q9H7Z6 458 aaKnown RBP13.73□□□□□ -0.21
TNFRSF1A-204ENST00000440083 AKIRIN1Q9H9L7 192 aaPredicted RBP13.73□□□□□ -0.21
TNFRSF1A-204ENST00000440083 SLC6A13Q9NSD5 602 aa13.73□□□□□ -0.21
TNFRSF1A-204ENST00000440083 CCM2LQ9NUG4 571 aaPredicted RBP13.73□□□□□ -0.21
TNFRSF1A-204ENST00000440083 ZFYVE26Q68DK2 2539 aa13.73□□□□□ -0.21
TNFRSF1A-204ENST00000440083 FER1L5A0AVI2 2057 aa13.73□□□□□ -0.21
TNFRSF1A-204ENST00000440083 LAMA5O15230 3695 aa13.72□□□□□ -0.21
TNFRSF1A-204ENST00000440083 TCRBV5S2A0A599 114 aa13.72□□□□□ -0.21
TNFRSF1A-204ENST00000440083 PDPK1O15530 556 aa13.72□□□□□ -0.21
TNFRSF1A-204ENST00000440083 ZSCAN9O15535 394 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF1A-204ENST00000440083 ZNF749O43361 778 aa13.72□□□□□ -0.21
TNFRSF1A-204ENST00000440083 ERI3O43414 337 aaKnown RBP13.72□□□□□ -0.21
TNFRSF1A-204ENST00000440083 TBX19O60806 448 aa13.72□□□□□ -0.21
TNFRSF1A-204ENST00000440083 SCN2BO60939 215 aa13.72□□□□□ -0.21
TNFRSF1A-204ENST00000440083 TIPRLO75663 272 aa13.72□□□□□ -0.21
TNFRSF1A-204ENST00000440083 C6orf47O95873 294 aa13.72□□□□□ -0.21
TNFRSF1A-204ENST00000440083 EIF2S1P05198 315 aaKnown RBP13.72□□□□□ -0.21
TNFRSF1A-204ENST00000440083 SLC35G6P0C7Q6 338 aa13.72□□□□□ -0.21
TNFRSF1A-204ENST00000440083 WT1P19544 449 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF1A-204ENST00000440083 DDCP20711 480 aa13.72□□□□□ -0.21
TNFRSF1A-204ENST00000440083 PTPN6P29350 595 aa13.72□□□□□ -0.21
TNFRSF1A-204ENST00000440083 ARFIP1P53367 373 aa13.72□□□□□ -0.21
TNFRSF1A-204ENST00000440083 TLE3Q04726 772 aa13.72□□□□□ -0.21
TNFRSF1A-204ENST00000440083 C6orf15Q6UXA7 325 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF1A-204ENST00000440083 ASPGQ86U10 573 aa13.72□□□□□ -0.21
TNFRSF1A-204ENST00000440083 SERPINA11Q86U17 422 aa13.72□□□□□ -0.21
TNFRSF1A-204ENST00000440083 CALHM3Q86XJ0 350 aa13.72□□□□□ -0.21
TNFRSF1A-204ENST00000440083 NLGN4XQ8N0W4 816 aa13.72□□□□□ -0.21
TNFRSF1A-204ENST00000440083 NLGN4YQ8NFZ3 816 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF1A-204ENST00000440083 OR8K5Q8NH50 307 aa13.72□□□□□ -0.21
TNFRSF1A-204ENST00000440083 LRTOMTQ8WZ04 291 aa13.72□□□□□ -0.21
TNFRSF1A-204ENST00000440083 KCNC2Q96PR1 638 aa13.72□□□□□ -0.21
TNFRSF1A-204ENST00000440083 ZFYVE21Q9BQ24 234 aa13.72□□□□□ -0.21
TNFRSF1A-204ENST00000440083 ZNF717Q9BY31 904 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF1A-204ENST00000440083 UGT2B28Q9BY64 529 aa13.72□□□□□ -0.21
TNFRSF1A-204ENST00000440083 RAD21L1Q9H4I0 556 aa13.72□□□□□ -0.21
TNFRSF1A-204ENST00000440083 RPF2Q9H7B2 306 aaKnown RBP13.72□□□□□ -0.21
TNFRSF1A-204ENST00000440083 YY1AP1Q9H869 796 aa13.72□□□□□ -0.21
TNFRSF1A-204ENST00000440083 DDX31Q9H8H2 851 aaKnown RBP13.72□□□□□ -0.21
TNFRSF1A-204ENST00000440083 SERTAD3Q9UJW9 196 aa13.72□□□□□ -0.21
TNFRSF1A-204ENST00000440083 EXO1Q9UQ84 846 aaKnown RBP13.72□□□□□ -0.21
TNFRSF1A-204ENST00000440083 V9GYQ6 96 aa13.72□□□□□ -0.21
TNFRSF1A-204ENST00000440083 SEC16AO15027 2179 aa13.72□□□□□ -0.21
TNFRSF1A-204ENST00000440083 A0A087WV48 116 aa13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 A0A0A6YYD5 115 aa13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 A0A0G2JN53 185 aa13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 LOC101059948A0A1B0GTJ6 334 aa13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 A0A1W2PRB8 838 aa13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 LRIT2A6NDA9 550 aa13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 H0YGG7 62 aa13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 P2RX6O15547 441 aa13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 CPNE3O75131 537 aaKnown RBP13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 MED26O95402 600 aa13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 TBX6O95947 436 aaPredicted RBP13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 RPSAP08865 295 aaKnown RBP13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 FASP25445 335 aa13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 ARF3P61204 181 aaPredicted RBP13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 SNRPNP63162 240 aaKnown RBP13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 FAM98BQ52LJ0 330 aaKnown RBP13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 ZC3H12BQ5HYM0 836 aaKnown RBP13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 C1orf189Q5VU69 101 aa13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 LCN10Q6JVE6 187 aa13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 FAM199XQ6PEV8 388 aaPredicted RBP13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 C19orf48Q6RUI8 117 aa13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 ANGPTL8Q6UXH0 198 aa13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 BPHLQ86WA6 291 aaPredicted RBP13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 PDSS2Q86YH6 399 aa13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 KBTBD2Q8IY47 623 aa13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 GPR135Q8IZ08 494 aa13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 LILRA2Q8N149 483 aa13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 METTL27Q8N6F8 245 aaPredicted RBP13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 TMEM102Q8N9M5 508 aaPredicted RBP13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 FAM47BQ8NA70 645 aa13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 OR2L5Q8NG80 312 aa13.71□□□□□ -0.21
TNFRSF1A-204ENST00000440083 NT5CQ8TCD5 201 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms