RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 WWP2O00308 870 aa21.94■■□□□ 1.1
VARS-217ENST00000440048 CRCPO75575 148 aa21.94■■□□□ 1.1
VARS-217ENST00000440048 CRYABP02511 175 aaKnown RBP21.94■■□□□ 1.1
VARS-217ENST00000440048 ALDH3A1P30838 453 aa21.94■■□□□ 1.1
VARS-217ENST00000440048 GALNSP34059 522 aa21.94■■□□□ 1.1
VARS-217ENST00000440048 TDGF1P3P51864 188 aa21.94■■□□□ 1.1
VARS-217ENST00000440048 TRA2BP62995 288 aaKnown RBP21.94■■□□□ 1.1
VARS-217ENST00000440048 ERVK-8P63133 956 aa21.94■■□□□ 1.1
VARS-217ENST00000440048 RAE1P78406 368 aaKnown RBP21.94■■□□□ 1.1
VARS-217ENST00000440048 ELOAQ14241 798 aaKnown RBP21.94■■□□□ 1.1
VARS-217ENST00000440048 ZNF267Q14586 743 aaPredicted RBP21.94■■□□□ 1.1
VARS-217ENST00000440048 MAPKAPK3Q16644 382 aa21.94■■□□□ 1.1
VARS-217ENST00000440048 FHL5Q5TD97 284 aa21.94■■□□□ 1.1
VARS-217ENST00000440048 OR5L2Q8NGL0 311 aa21.94■■□□□ 1.1
VARS-217ENST00000440048 CNPPD1Q9BV87 410 aa21.94■■□□□ 1.1
VARS-217ENST00000440048 ERVK-19Q9WJR5 959 aa21.94■■□□□ 1.1
VARS-217ENST00000440048 PCDH7O60245 1069 aa21.93■■□□□ 1.1
VARS-217ENST00000440048 NME2P1O60361 137 aa21.93■■□□□ 1.1
VARS-217ENST00000440048 NME2P22392 152 aa21.93■■□□□ 1.1
VARS-217ENST00000440048 MST1P26927 711 aa21.93■■□□□ 1.1
VARS-217ENST00000440048 XKP51811 444 aa21.93■■□□□ 1.1
VARS-217ENST00000440048 BTKQ06187 659 aa21.93■■□□□ 1.1
VARS-217ENST00000440048 ACSM2AQ08AH3 577 aa21.93■■□□□ 1.1
VARS-217ENST00000440048 ASPHQ12797 758 aa21.93■■□□□ 1.1
VARS-217ENST00000440048 SPIN4Q56A73 249 aa21.93■■□□□ 1.1
VARS-217ENST00000440048 ACSM2BQ68CK6 577 aa21.93■■□□□ 1.1
VARS-217ENST00000440048 SLC48A1Q6P1K1 146 aa21.93■■□□□ 1.1
VARS-217ENST00000440048 CYP4Z2PQ8N1L4 340 aa21.93■■□□□ 1.1
VARS-217ENST00000440048 TMEM125Q96AQ2 219 aa21.93■■□□□ 1.1
VARS-217ENST00000440048 RASL10BQ96S79 203 aa21.93■■□□□ 1.1
VARS-217ENST00000440048 MECRQ9BV79 373 aa21.93■■□□□ 1.1
VARS-217ENST00000440048 RGS16O15492 202 aaPredicted RBP21.92■■□□□ 1.1
VARS-217ENST00000440048 UROSP10746 265 aa21.92■■□□□ 1.1
VARS-217ENST00000440048 ZNF750Q32MQ0 723 aa21.92■■□□□ 1.1
VARS-217ENST00000440048 TRIM46Q7Z4K8 759 aa21.92■■□□□ 1.1
VARS-217ENST00000440048 PNPLA5Q7Z6Z6 429 aaPredicted RBP21.92■■□□□ 1.1
VARS-217ENST00000440048 C9orf40Q8IXQ3 194 aa21.92■■□□□ 1.1
VARS-217ENST00000440048 ASB15Q8WXK1 588 aa21.92■■□□□ 1.1
VARS-217ENST00000440048 C11orf24Q96F05 449 aaPredicted RBP21.92■■□□□ 1.1
VARS-217ENST00000440048 TRMOQ9BU70 441 aa21.92■■□□□ 1.1
VARS-217ENST00000440048 FAIM2Q9BWQ8 316 aa21.92■■□□□ 1.1
VARS-217ENST00000440048 CXorf21Q9HAI6 301 aa21.92■■□□□ 1.1
VARS-217ENST00000440048 SENP1Q9P0U3 644 aa21.92■■□□□ 1.1
VARS-217ENST00000440048 ASPDHA6ND91 283 aa21.91■■□□□ 1.1
VARS-217ENST00000440048 TYROBPO43914 113 aa21.91■■□□□ 1.1
VARS-217ENST00000440048 OR6B1O95007 311 aa21.91■■□□□ 1.1
VARS-217ENST00000440048 CPMP14384 443 aa21.91■■□□□ 1.1
VARS-217ENST00000440048 PORP16435 677 aaPredicted RBP21.91■■□□□ 1.1
VARS-217ENST00000440048 TIA1P31483 386 aaKnown RBP eCLIP21.91■■□□□ 1.1
VARS-217ENST00000440048 DEKP35659 375 aaKnown RBP21.91■■□□□ 1.1
VARS-217ENST00000440048 SOX3P41225 446 aa21.91■■□□□ 1.1
VARS-217ENST00000440048 IMPG1Q17R60 797 aa21.91■■□□□ 1.1
VARS-217ENST00000440048 SPDYAQ5MJ70 313 aa21.91■■□□□ 1.1
VARS-217ENST00000440048 CLEC6AQ6EIG7 209 aa21.91■■□□□ 1.1
VARS-217ENST00000440048 GALNT18Q6P9A2 607 aa21.91■■□□□ 1.1
VARS-217ENST00000440048 GPALPP1Q8IXQ4 340 aa21.91■■□□□ 1.1
VARS-217ENST00000440048 NUBPLQ8TB37 319 aa21.91■■□□□ 1.1
VARS-217ENST00000440048 ZIM3Q96PE6 472 aa21.91■■□□□ 1.1
VARS-217ENST00000440048 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.91■■□□□ 1.11e-10■■■■■ 34.8
VARS-217ENST00000440048 SIRT5Q9NXA8 310 aa21.91■■□□□ 1.1
VARS-217ENST00000440048 HEY2Q9UBP5 337 aa21.91■■□□□ 1.1
VARS-217ENST00000440048 ERVK-11Q9UQG0 969 aa21.91■■□□□ 1.1
VARS-217ENST00000440048 DLGAP4Q9Y2H0 992 aa21.91■■□□□ 1.1
VARS-217ENST00000440048 GNG14A0A1W2PPG7 69 aa21.9■■□□□ 1.1
VARS-217ENST00000440048 A8MVJ9 347 aa21.9■■□□□ 1.1
VARS-217ENST00000440048 ZNF354AO60765 605 aaPredicted RBP21.9■■□□□ 1.1
VARS-217ENST00000440048 SEMA7AO75326 666 aa21.9■■□□□ 1.1
VARS-217ENST00000440048 ERAL1O75616 437 aaKnown RBP21.9■■□□□ 1.1
VARS-217ENST00000440048 CLPSP04118 112 aa21.9■■□□□ 1.1
VARS-217ENST00000440048 IL3P08700 152 aa21.9■■□□□ 1.1
VARS-217ENST00000440048 ALDH9A1P49189 494 aa21.9■■□□□ 1.1
VARS-217ENST00000440048 SLC37A1P57057 533 aa21.9■■□□□ 1.1
VARS-217ENST00000440048 IL20RBQ6UXL0 311 aa21.9■■□□□ 1.1
VARS-217ENST00000440048 RNF111Q6ZNA4 994 aa21.9■■□□□ 1.1
VARS-217ENST00000440048 MDGA2Q7Z553 956 aa21.9■■□□□ 1.1
VARS-217ENST00000440048 FAM98AQ8NCA5 519 aaKnown RBP21.9■■□□□ 1.1
VARS-217ENST00000440048 C16orf78Q8WTQ4 265 aa21.9■■□□□ 1.1
VARS-217ENST00000440048 KLHL29Q96CT2 875 aa21.9■■□□□ 1.1
VARS-217ENST00000440048 FRMD6Q96NE9 622 aa21.9■■□□□ 1.1
VARS-217ENST00000440048 EBPLQ9BY08 206 aa21.9■■□□□ 1.1
VARS-217ENST00000440048 HPF1Q9NWY4 346 aa21.9■■□□□ 1.1
VARS-217ENST00000440048 PSME2Q9UL46 239 aa21.9■■□□□ 1.1
VARS-217ENST00000440048 KLF13Q9Y2Y9 288 aaPredicted RBP21.9■■□□□ 1.1
VARS-217ENST00000440048 EML6Q6ZMW3 1958 aa21.9■■□□□ 1.1
VARS-217ENST00000440048 GOLGA6L10A6NI86 522 aa21.89■■□□□ 1.09
VARS-217ENST00000440048 AZIN1O14977 448 aa21.89■■□□□ 1.09
VARS-217ENST00000440048 NPHS1O60500 1241 aa21.89■■□□□ 1.09
VARS-217ENST00000440048 AGFG2O95081 481 aa21.89■■□□□ 1.09
VARS-217ENST00000440048 CT62P0C5K7 136 aa21.89■■□□□ 1.09
VARS-217ENST00000440048 NT5EP21589 574 aa21.89■■□□□ 1.09
VARS-217ENST00000440048 FEN1P39748 380 aaKnown RBP21.89■■□□□ 1.09
VARS-217ENST00000440048 MPEG1Q2M385 716 aa21.89■■□□□ 1.09
VARS-217ENST00000440048 PIGGQ5H8A4 983 aa21.89■■□□□ 1.09
VARS-217ENST00000440048 CEP85LQ5SZL2 805 aa21.89■■□□□ 1.09
VARS-217ENST00000440048 GALNT12Q8IXK2 581 aa21.89■■□□□ 1.09
VARS-217ENST00000440048 RRAGDQ9NQL2 400 aaPredicted RBP21.89■■□□□ 1.09
VARS-217ENST00000440048 DOPEY1Q5JWR5 2465 aa21.88■■□□□ 1.09
VARS-217ENST00000440048 WISP2O76076 250 aa21.88■■□□□ 1.09
VARS-217ENST00000440048 CHRNGP07510 517 aa21.88■■□□□ 1.09
VARS-217ENST00000440048 ANXA4P09525 319 aaPredicted RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms