RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 TMEM45AQ9NWC5 275 aa11.15□□□□□ -0.62
SMPD4-209ENST00000439886 PLCL2Q9UPR0 1127 aa11.15□□□□□ -0.62
SMPD4-209ENST00000439886 RPL36Q9Y3U8 105 aaKnown RBP11.15□□□□□ -0.62
SMPD4-209ENST00000439886 OR2AG2A6NM03 316 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 EEF1E1O43324 174 aaKnown RBP11.14□□□□□ -0.63
SMPD4-209ENST00000439886 GPX2P18283 190 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 CD53P19397 219 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 HOXD9P28356 352 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-209ENST00000439886 SLC6A4P31645 630 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 CSKP41240 450 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 VSX2P58304 361 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-209ENST00000439886 KIAA1161Q6NSJ0 714 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 CREB3L2Q70SY1 520 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 KRT77Q7Z794 578 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 SLC30A8Q8IWU4 369 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 RDH10Q8IZV5 341 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.14□□□□□ -0.63
SMPD4-209ENST00000439886 REPS1Q96D71 796 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 LRR1Q96L50 414 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 ZNF285Q96NJ3 590 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 SORBS1Q9BX66 1292 aaKnown RBP11.14□□□□□ -0.63
SMPD4-209ENST00000439886 CD93Q9NPY3 652 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 PAK6Q9NQU5 681 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-209ENST00000439886 RBFOX1Q9NWB1 397 aaKnown RBP11.14□□□□□ -0.63
SMPD4-209ENST00000439886 HPF1Q9NWY4 346 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 RNF181Q9P0P0 153 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 TRPC4Q9UBN4 977 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 ERVK-19Q9WJR5 959 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 CKAP5Q14008 2032 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 C2orf78A6NCI8 922 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 CHURC1-FNTBB4DL54 471 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 TGFB1P01137 390 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 MRPL19P49406 292 aaKnown RBP11.14□□□□□ -0.63
SMPD4-209ENST00000439886 CLCN4P51793 760 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 MLLT1Q03111 559 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-209ENST00000439886 CCINQ13939 588 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 TEAD4Q15561 434 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 TOR1AIP1Q5JTV8 583 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 RASSF6Q6ZTQ3 369 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 BEND4Q6ZU67 534 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 RRM2BQ7LG56 351 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 OR52E4Q8NGH9 312 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 SGTBQ96EQ0 304 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 C12orf66Q96MD2 445 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 TRIB3Q96RU7 358 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 MAPKAP1Q9BPZ7 522 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 SAP130Q9H0E3 1048 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 SLC6A15Q9H2J7 730 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 MIEF1Q9NQG6 463 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 SEMA3GQ9NS98 782 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 MRPL15Q9P015 296 aaKnown RBP11.14□□□□□ -0.63
SMPD4-209ENST00000439886 HCN2Q9UL51 889 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 SCML1Q9UN30 329 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 ZNF646O15015 1829 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-209ENST00000439886 TNFRSF10BO14763 440 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 SGCEO43556 437 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 DRD5P21918 477 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 PTPN6P29350 595 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 CRYBB2P43320 205 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 PRKAG1P54619 331 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 MEF2AQ02078 507 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-209ENST00000439886 MBTPS1Q14703 1052 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 RTP2Q5QGT7 225 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 ZNF680Q8NEM1 530 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 DNAJA4Q8WW22 397 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-209ENST00000439886 MYO19Q96H55 970 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 MNTQ99583 582 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 MGME1Q9BQP7 344 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 NTMT1Q9BV86 223 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 RBCK1Q9BYM8 510 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 TMEM168Q9H0V1 697 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 MAGEH1Q9H213 219 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 IL17CQ9P0M4 197 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 IL20RAQ9UHF4 553 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 TRAPPC4Q9Y296 219 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 PRELID3BQ9Y3B1 194 aa11.14□□□□□ -0.63
SMPD4-209ENST00000439886 PCDHGA9Q9Y5G4 932 aaKnown RBP11.14□□□□□ -0.63
SMPD4-209ENST00000439886 ARID1BQ8NFD5 2236 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-209ENST00000439886 WASH4PA8MWX3 477 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 PRR23D1E9PI22 279 aaPredicted RBP11.13□□□□□ -0.63
SMPD4-209ENST00000439886 PRRG1O14668 218 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 NME6O75414 186 aaPredicted RBP11.13□□□□□ -0.63
SMPD4-209ENST00000439886 PPM1BO75688 479 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 PRR23D2P0DMB1 279 aaPredicted RBP11.13□□□□□ -0.63
SMPD4-209ENST00000439886 MAOBP27338 520 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 TSPAN7P41732 249 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 TEKQ02763 1124 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 RBBP4Q09028 425 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 NFATC2Q13469 925 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.13□□□□□ -0.63
SMPD4-209ENST00000439886 XKR4Q5GH76 650 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 CERS6Q6ZMG9 384 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 OLIG3Q7RTU3 272 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 VN1R5Q7Z5H4 357 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 TMPRSS11BQ86T26 416 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 TSPAN33Q86UF1 283 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 GAL3ST1Q99999 423 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 SLC28A3Q9HAS3 691 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 FAM120CQ9NX05 1096 aaKnown RBP11.13□□□□□ -0.63
SMPD4-209ENST00000439886 PIKFYVEQ9Y2I7 2098 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms