RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 SOX3P41225 446 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 NCF4Q15080 339 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 LCTLQ6UWM7 567 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 TRIM69Q86WT6 500 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 TMCO6Q96DC7 493 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 LINC00615Q96LM1 132 aaPredicted RBP15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 FUZQ9BT04 418 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 BARHL1Q9BZE3 327 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 C14orf119Q9NWQ9 140 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 ERVK13-1Q9NX77 482 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 GDE1Q9NZC3 331 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 CLEC2DQ9UHP7 191 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 HEPACAM2A8MVW5 462 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 K7ESM1 405 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 PLPP1O14494 284 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 PDE9AO76083 593 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 SEMA3DO95025 777 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 TBX6O95947 436 aaPredicted RBP15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 H1F0P07305 194 aaKnown RBP15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 IGFBP1P08833 259 aaPredicted RBP15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 ADH5P11766 374 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 CKMT1AP12532 417 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 FEN1P39748 380 aaKnown RBP15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 CRYBB2P43320 205 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 NR4A2P43354 598 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 VASPP50552 380 aaPredicted RBP15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 NKX2-5P52952 324 aaPredicted RBP15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 IFITM2Q01629 132 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 ZNF91Q05481 1191 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 SPHARQ15513 63 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 DCST1Q5T197 706 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 FAM180BQ6P0A1 224 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 PGBD2Q6P3X8 592 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 TRMT11Q7Z4G4 463 aaKnown RBP15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 WDR53Q7Z5U6 358 aaPredicted RBP15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 ZNF547Q8IVP9 402 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 KRT78Q8N1N4 520 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 GALNT6Q8NCL4 622 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 ZNF486Q96H40 463 aaPredicted RBP15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 MND1Q9BWT6 205 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 ZDHHC5Q9C0B5 715 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 ZNF576Q9H609 170 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 NEUROD4Q9HD90 331 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 EXOSC4Q9NPD3 245 aaKnown RBP15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 NDUFB11Q9NX14 153 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 AHSPQ9NZD4 102 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 ACAD8Q9UKU7 415 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 STUB1Q9UNE7 303 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 RPL36Q9Y3U8 105 aaKnown RBP15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 V9GYH0 126 aa15.55■□□□□ 0.08
CLCNKA-203ENST00000439316 LRRK1Q38SD2 2015 aa15.54■□□□□ 0.08
CLCNKA-203ENST00000439316 ZNF670-ZNF695F2Z2N8 137 aa15.54■□□□□ 0.08
CLCNKA-203ENST00000439316 PDPK1O15530 556 aa15.54■□□□□ 0.08
CLCNKA-203ENST00000439316 XKP51811 444 aa15.54■□□□□ 0.08
CLCNKA-203ENST00000439316 SF3B4Q15427 424 aaKnown RBP eCLIP15.54■□□□□ 0.08
CLCNKA-203ENST00000439316 MFSD4BQ5TF39 518 aa15.54■□□□□ 0.08
CLCNKA-203ENST00000439316 SLC34A3Q8N130 599 aa15.54■□□□□ 0.08
CLCNKA-203ENST00000439316 NATD1Q8N6N6 113 aa15.54■□□□□ 0.08
CLCNKA-203ENST00000439316 ZNF366Q8N895 744 aa15.54■□□□□ 0.08
CLCNKA-203ENST00000439316 IL17RCQ8NAC3 791 aa15.54■□□□□ 0.08
CLCNKA-203ENST00000439316 OR8J1Q8NGP2 316 aa15.54■□□□□ 0.08
CLCNKA-203ENST00000439316 ASB15Q8WXK1 588 aa15.54■□□□□ 0.08
CLCNKA-203ENST00000439316 TRMT61AQ96FX7 289 aaKnown RBP15.54■□□□□ 0.08
CLCNKA-203ENST00000439316 WDFY2Q96P53 400 aa15.54■□□□□ 0.08
CLCNKA-203ENST00000439316 IL17FQ96PD4 163 aa15.54■□□□□ 0.08
CLCNKA-203ENST00000439316 DPEP2Q9H4A9 486 aa15.54■□□□□ 0.08
CLCNKA-203ENST00000439316 WBP11Q9Y2W2 641 aaKnown RBP15.54■□□□□ 0.08
CLCNKA-203ENST00000439316 PLXND1Q9Y4D7 1925 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 C17orf113A0A1B0GUU1 675 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 SLC35F4A4IF30 521 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 OTOL1A6NHN0 477 aaPredicted RBP15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 CAPN5O15484 640 aaPredicted RBP15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 OR10H3O60404 316 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 B4GALT2O60909 372 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 ADH1CP00326 375 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 DDX5P17844 614 aaKnown RBP15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 FCARP24071 287 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 ITGB7P26010 798 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 KCNJ5P48544 419 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 DLX2Q07687 328 aaPredicted RBP15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 ADAM15Q13444 863 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 OCLNQ16625 522 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 TANGO2Q6ICL3 276 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 CASP12Q6UXS9 341 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 ZNF765Q7L2R6 523 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 C12orf40Q86WS4 652 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 UBQLNLQ8IYU4 475 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 NANOGP1Q8N7R0 232 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 OR4D11Q8NGI4 311 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 VANGL1Q8TAA9 524 aaPredicted RBP15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 TM4SF18Q96CE8 201 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 NUS1Q96E22 293 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 ZNF354BQ96LW1 612 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 TEFMQ96QE5 360 aaKnown RBP15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 RHBGQ9H310 441 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 NEK6Q9HC98 313 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 SIRT3Q9NTG7 399 aaPredicted RBP15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 CLEC1BQ9P126 229 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 GRIP1Q9Y3R0 1128 aa15.53■□□□□ 0.08
CLCNKA-203ENST00000439316 SNX11Q9Y5W9 270 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms