RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 OR2A25A4D2G3 310 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 ASPDHA6ND91 283 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 METTL15A6NJ78 407 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 H0YIV9 168 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 GTPBP1O00178 669 aaKnown RBP6.37□□□□□ -1.39
CSDE1-205ENST00000438362 SLC31A1O15431 190 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 B3GALT2O43825 422 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 ADAMTS4O75173 837 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 ARL6IP5O75915 188 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 FGF18O76093 207 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 PTHP01270 115 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 TCEA1P23193 301 aaKnown RBP6.37□□□□□ -1.39
CSDE1-205ENST00000438362 PSMA3P25788 255 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 ERP29P30040 261 aaKnown RBP6.37□□□□□ -1.39
CSDE1-205ENST00000438362 EMP3P54852 163 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 BTBD16Q32M84 506 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 TOR1AIP1Q5JTV8 583 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 SLC35F1Q5T1Q4 408 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 KIAA1324Q6UXG2 1013 aaKnown RBP6.37□□□□□ -1.39
CSDE1-205ENST00000438362 HSD11B1LQ7Z5J1 315 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 GHDCQ8N2G8 530 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 VWA5B2Q8N398 1253 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 CPA6Q8N4T0 437 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 TRMT2BQ96GJ1 504 aaKnown RBP6.37□□□□□ -1.39
CSDE1-205ENST00000438362 SGIP1Q9BQI5 828 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 CLSTN3Q9BQT9 956 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 HDHD5Q9BXW7 423 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 CPEB1Q9BZB8 566 aaKnown RBP6.37□□□□□ -1.39
CSDE1-205ENST00000438362 COMMD9Q9P000 198 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 EIF3KQ9UBQ5 218 aaKnown RBP6.37□□□□□ -1.39
CSDE1-205ENST00000438362 ZFR2Q9UPR6 939 aaKnown RBP6.37□□□□□ -1.39
CSDE1-205ENST00000438362 A8MU76 341 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 CENPBD1B2RD01 187 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 J3QLW9 94 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 VEGFDO43915 354 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 SLC19A2O60779 497 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 SULT1C4O75897 302 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 OR2B3O76000 313 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 ZNF19P17023 458 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 ZNF3P17036 446 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 STOMP27105 288 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 CTSCP53634 463 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 WNT4P56705 351 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 BTN3A2P78410 334 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 AQP6Q13520 282 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 BCL7AQ4VC05 210 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 KHDRBS2Q5VWX1 349 aaKnown RBP6.37□□□□□ -1.39
CSDE1-205ENST00000438362 ALG1LQ6GMV1 187 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 LINGO2Q7L985 606 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 TMCO2Q7Z6W1 182 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-205ENST00000438362 FAM124AQ86V42 546 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 TMC8Q8IU68 726 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 SLITRK4Q8IW52 837 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 NRSN1Q8IZ57 195 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 CPXM2Q8N436 756 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 WDR48Q8TAF3 677 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 MOAP1Q96BY2 351 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 MYEOVQ96EZ4 313 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 LMLNQ96KR4 655 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 CAPNS2Q96L46 248 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 SRMSQ9H3Y6 488 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 IGFLR1Q9H665 355 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 MYNNQ9NPC7 610 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 MARK1Q9P0L2 795 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 C5AR2Q9P296 337 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 NDOR1Q9UHB4 597 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 ZNF225Q9UK10 706 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 NDRG4Q9ULP0 352 aaKnown RBP6.37□□□□□ -1.39
CSDE1-205ENST00000438362 PPT2Q9UMR5 302 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 LIPT1Q9Y234 373 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 KCNK6Q9Y257 313 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 PADI2Q9Y2J8 665 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 A3GALT2U3KPV4 340 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 TPD52L2O43399 206 aaKnown RBP6.36□□□□□ -1.39
CSDE1-205ENST00000438362 MT-ND5P03915 603 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 FHP07954 510 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 SLC10A3P09131 477 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 ARAFP10398 606 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 JUNDP17535 347 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 CHMP24386 653 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 ACVR2AP27037 513 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 BMP8BP34820 402 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 MNDAP41218 407 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 MNX1P50219 401 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-205ENST00000438362 HSF2Q03933 536 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 ELOAQ14241 798 aaKnown RBP6.36□□□□□ -1.39
CSDE1-205ENST00000438362 NFE2L1Q14494 772 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 FAM26DQ5JW98 314 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 UBE2UQ5VVX9 321 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 RFLNAQ6ZTI6 216 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 BMP8AQ7Z5Y6 402 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 PARGQ86W56 976 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 LACC1Q8IV20 430 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 LYSMD2Q8IV50 215 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 HDDC3Q8N4P3 179 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 SAMD12Q8N8I0 201 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 OR2T33Q8NG76 320 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 OR52E4Q8NGH9 312 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 OR6K6Q8NGW6 343 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 ZNF431Q8TF32 576 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms