RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 ZNF787Q6DD87 383 aa6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 FAM180BQ6P0A1 224 aa6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 SLC48A1Q6P1K1 146 aa6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 C8orf82Q6P1X6 216 aaPredicted RBP6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 DLEU7Q6UYE1 221 aa6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 LINC00114Q6XXX2 140 aa6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 TTLL10Q6ZVT0 673 aa6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 ASRGL1Q7L266 308 aa6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 R3HCC1LQ7Z5L2 792 aaKnown RBP6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 CLECL1Q8IZS7 167 aa6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 METTL27Q8N6F8 245 aaPredicted RBP6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 FAM47BQ8NA70 645 aa6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 RBM15BQ8NDT2 890 aaKnown RBP6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 TMEM52Q8NDY8 209 aa6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 OR8J2Q8NGG1 315 aa6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 STARD8Q92502 1023 aa6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 GTF2H4Q92759 462 aa6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 CIDECQ96AQ7 238 aaPredicted RBP6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 RNF31Q96EP0 1072 aa6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 MMABQ96EY8 250 aaPredicted RBP6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 ZNF764Q96H86 408 aaPredicted RBP6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 COX4I2Q96KJ9 171 aa6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 PRPF18Q99633 342 aaKnown RBP6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 CTRCQ99895 268 aa6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 INPP5KQ9BT40 448 aa6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 NDC1Q9BTX1 674 aa6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 DUSP26Q9BV47 211 aa6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 FAIM2Q9BWQ8 316 aa6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 EFCAB1Q9HAE3 211 aa6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 CLK4Q9HAZ1 481 aaKnown RBP6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 FANCEQ9HB96 536 aa6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 SERHLQ9NQF3 203 aa6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 MIEF1Q9NQG6 463 aa6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 FBXO8Q9NRD0 319 aa6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 SLC22A11Q9NSA0 550 aa6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 EHD3Q9NZN3 535 aa6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 SH3BP4Q9P0V3 963 aa6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 SLAMF8Q9P0V8 285 aa6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 HCN3Q9P1Z3 774 aa6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 C5AR2Q9P296 337 aa6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 CGGBP1Q9UFW8 167 aaPredicted RBP6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 PHF11Q9UIL8 331 aa6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 LEF1Q9UJU2 399 aaPredicted RBP6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 MAU2Q9Y6X3 613 aa6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 GPR179Q6PRD1 2367 aa6.62□□□□□ -1.35
LSM3P3-201ENST00000436601 PRSS51A0A1B0GVH4 220 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 A0A1B0GX78 115 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 A0A1W2PS29 197 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 C1orf226A1L170 272 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 B4E171 279 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 ANKRD65E5RJM6 399 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 TMX2-CTNND1H3BSU7 103 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 DSCR3O14972 297 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 POLR1CO15160 346 aaPredicted RBP6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 GYG2O15488 501 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 HNRNPCL1O60812 293 aaKnown RBP6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 SCRG1O75711 98 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 NTRK1P04629 796 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 KRT16P08779 473 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 FTH1P19P0C7X4 201 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 NR2F6P10588 404 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 CDK4P11802 303 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 ZNF28P17035 718 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 HOXB9P17482 250 aaPredicted RBP6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 ITIH1P19827 911 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 POU3F2P20265 443 aaPredicted RBP6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 PTPN4P29074 926 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 PTPN6P29350 595 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 ETV5P41161 510 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 TSPAN7P41732 249 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 FRKP42685 505 aaPredicted RBP6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 CDKN2CP42773 168 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 AVPR1BP47901 424 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 NUDT2P50583 147 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 HNRNPFP52597 415 aaKnown RBP6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 RAB38P57729 211 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 SHC2P98077 582 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 PLIN5Q00G26 463 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 DUSP2Q05923 314 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 ACTN3Q08043 901 aaPredicted RBP6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 MAP4K2Q12851 820 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 ART3Q13508 389 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 NFYCQ13952 458 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 MAPKAPK3Q16644 382 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 ZNF750Q32MQ0 723 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 MMEL1Q495T6 779 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 HES3Q5TGS1 186 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 ANXA8L1Q5VT79 327 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 C1orf189Q5VU69 101 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 ZNF385CQ66K41 422 aaPredicted RBP6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 RHBDD2Q6NTF9 364 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 NIPAL1Q6NVV3 410 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 PRMT9Q6P2P2 845 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 HACD2Q6Y1H2 254 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 Q6ZS46 218 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 MSANTD1Q6ZTZ1 278 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 ANKRD46Q86W74 232 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 PPP1R3BQ86XI6 285 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 TMEM126BQ8IUX1 230 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms