RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 ZUFSPQ96AP4 578 aa14.9□□□□□ -0.02
NEDD4-202ENST00000435532 MS4A4EQ96PG1 132 aa14.9□□□□□ -0.02
NEDD4-202ENST00000435532 B3GNT4Q9C0J1 378 aa14.9□□□□□ -0.02
NEDD4-202ENST00000435532 TPK1Q9H3S4 243 aa14.9□□□□□ -0.02
NEDD4-202ENST00000435532 CXorf56Q9H5V9 222 aa14.9□□□□□ -0.02
NEDD4-202ENST00000435532 MCTS1Q9ULC4 181 aaKnown RBP14.9□□□□□ -0.02
NEDD4-202ENST00000435532 MMP17Q9ULZ9 603 aa14.9□□□□□ -0.02
NEDD4-202ENST00000435532 NENFQ9UMX5 172 aa14.9□□□□□ -0.02
NEDD4-202ENST00000435532 ING4Q9UNL4 249 aa14.9□□□□□ -0.02
NEDD4-202ENST00000435532 IL12AP29459 219 aa14.9□□□□□ -0.02
NEDD4-202ENST00000435532 LRIT3Q3SXY7 679 aa14.9□□□□□ -0.02
NEDD4-202ENST00000435532 NDUFAF5Q5TEU4 345 aa14.9□□□□□ -0.02
NEDD4-202ENST00000435532 LHX8Q68G74 356 aa14.9□□□□□ -0.02
NEDD4-202ENST00000435532 P2RY8Q86VZ1 359 aa14.9□□□□□ -0.02
NEDD4-202ENST00000435532 OR4N5Q8IXE1 308 aa14.9□□□□□ -0.02
NEDD4-202ENST00000435532 DIRAS2Q96HU8 199 aa14.9□□□□□ -0.02
NEDD4-202ENST00000435532 SCGB3A2Q96PL1 93 aa14.9□□□□□ -0.02
NEDD4-202ENST00000435532 MND1Q9BWT6 205 aa14.9□□□□□ -0.02
NEDD4-202ENST00000435532 POLR2J2Q9GZM3 115 aaKnown RBP14.9□□□□□ -0.02
NEDD4-202ENST00000435532 AIREO43918 545 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 NELFEP18615 380 aaKnown RBP14.89□□□□□ -0.03
NEDD4-202ENST00000435532 ALDH3A2P51648 485 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 ADAM8P78325 824 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 ADAMTSL4Q6UY14 1074 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 MAMDC2Q7Z304 686 aaPredicted RBP14.89□□□□□ -0.03
NEDD4-202ENST00000435532 TSC22D4Q9Y3Q8 395 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 PLOD3O60568 738 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 RFPL1O75677 317 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 KDM4BO94953 1096 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 PRLP01236 227 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 ABOP16442 354 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 ZNF140P52738 457 aaPredicted RBP14.89□□□□□ -0.03
NEDD4-202ENST00000435532 INHBCP55103 352 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 ZNF252P-AS1Q0IIN9 211 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 RPE65Q16518 533 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 RGS21Q2M5E4 152 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 CARD17Q5XLA6 110 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 HMBOX1Q6NT76 420 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 PIGWQ7Z7B1 504 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 RTN4RL1Q86UN2 441 aaPredicted RBP14.89□□□□□ -0.03
NEDD4-202ENST00000435532 NSUN5Q96P11 429 aaKnown RBP14.89□□□□□ -0.03
NEDD4-202ENST00000435532 CD320Q9NPF0 282 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 KLHL21Q9UJP4 597 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 C17orf113A0A1B0GUU1 675 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 SCRG1O75711 98 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 ARL6IP5O75915 188 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 MMP2P08253 660 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 H2BFMP0C1H6 154 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 ADORA3P0DMS8 318 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 NR0B1P51843 470 aaKnown RBP14.89□□□□□ -0.03
NEDD4-202ENST00000435532 CDH11P55287 796 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 TMEM52BQ4KMG9 183 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 NADSYN1Q6IA69 706 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 OR2A12Q8NGT7 310 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 L3HYPDHQ96EM0 354 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 RADILQ96JH8 1075 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 CHCHD6Q9BRQ6 235 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 CADM1Q9BY67 442 aaKnown RBP14.89□□□□□ -0.03
NEDD4-202ENST00000435532 COL18A1P39060 1754 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 FOXE1O00358 373 aaPredicted RBP14.89□□□□□ -0.03
NEDD4-202ENST00000435532 CHRM5P08912 532 aaPredicted RBP14.89□□□□□ -0.03
NEDD4-202ENST00000435532 PGAM2P15259 253 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 NR4A1P22736 598 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 ACSL1P33121 698 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 GGT5P36269 586 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 CLCN2P51788 898 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 RNASE12Q5GAN4 147 aaKnown RBP14.89□□□□□ -0.03
NEDD4-202ENST00000435532 ZNF627Q7L945 461 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 ZSWIM9Q86XI8 627 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 NINJ1Q92982 152 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 ARRDC3Q96B67 414 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 MTHFD2LQ9H903 347 aaPredicted RBP14.89□□□□□ -0.03
NEDD4-202ENST00000435532 KCNK12Q9HB15 430 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 GNG8Q9UK08 70 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 SPEF1Q9Y4P9 236 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 A0A0A6YYC8 382 aaPredicted RBP14.89□□□□□ -0.03
NEDD4-202ENST00000435532 METTL21EPA6NDL7 271 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 I3L1I5 382 aaPredicted RBP14.89□□□□□ -0.03
NEDD4-202ENST00000435532 RDH16O75452 317 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 CLDN8P56748 225 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 DSG2Q14126 1118 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 ZNF77Q15935 545 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 RAB6CQ53S08 254 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 RBM48Q5RL73 367 aaKnown RBP14.89□□□□□ -0.03
NEDD4-202ENST00000435532 KANK2Q63ZY3 851 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.89□□□□□ -0.03
NEDD4-202ENST00000435532 CDRT4Q8N9R6 151 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 RAB6CQ9H0N0 254 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 PCDHAC1Q9H158 963 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 CUTCQ9NTM9 273 aa14.89□□□□□ -0.03
NEDD4-202ENST00000435532 BOKQ9UMX3 212 aaPredicted RBP14.89□□□□□ -0.03
NEDD4-202ENST00000435532 SGK494L7N484 410 aa14.88□□□□□ -0.03
NEDD4-202ENST00000435532 RTCAO00442 366 aaKnown RBP14.88□□□□□ -0.03
NEDD4-202ENST00000435532 ZFAND5O76080 213 aa14.88□□□□□ -0.03
NEDD4-202ENST00000435532 C1SP09871 688 aa14.88□□□□□ -0.03
NEDD4-202ENST00000435532 GRIK2Q13002 908 aa14.88□□□□□ -0.03
NEDD4-202ENST00000435532 OPN5Q6U736 354 aa14.88□□□□□ -0.03
NEDD4-202ENST00000435532 ARHGAP12Q8IWW6 846 aa14.88□□□□□ -0.03
NEDD4-202ENST00000435532 DENND2DQ9H6A0 471 aaPredicted RBP14.88□□□□□ -0.03
NEDD4-202ENST00000435532 ANKRD28O15084 1053 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms