RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 EBPLQ9BY08 206 aa17.09■□□□□ 0.33
HLA-F-220ENST00000434407 OR8D2Q9GZM6 311 aa17.09■□□□□ 0.33
HLA-F-220ENST00000434407 TRIM45Q9H8W5 580 aaPredicted RBP17.09■□□□□ 0.33
HLA-F-220ENST00000434407 LRTM1Q9HBL6 345 aa17.09■□□□□ 0.33
HLA-F-220ENST00000434407 PSME2Q9UL46 239 aa17.09■□□□□ 0.33
HLA-F-220ENST00000434407 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.09■□□□□ 0.33
HLA-F-220ENST00000434407 FIS1Q9Y3D6 152 aa17.09■□□□□ 0.33
HLA-F-220ENST00000434407 ZGRF1Q86YA3 2104 aa17.09■□□□□ 0.33
HLA-F-220ENST00000434407 POLEQ07864 2286 aa17.08■□□□□ 0.33
HLA-F-220ENST00000434407 OR5H15A6NDH6 313 aa17.08■□□□□ 0.32
HLA-F-220ENST00000434407 PIP5K1BO14986 540 aa17.08■□□□□ 0.32
HLA-F-220ENST00000434407 LYPLA1O75608 230 aaPredicted RBP17.08■□□□□ 0.32
HLA-F-220ENST00000434407 ZFAND5O76080 213 aa17.08■□□□□ 0.32
HLA-F-220ENST00000434407 PORP16435 677 aaPredicted RBP17.08■□□□□ 0.32
HLA-F-220ENST00000434407 BGNP21810 368 aa17.08■□□□□ 0.32
HLA-F-220ENST00000434407 TRHRP34981 398 aaPredicted RBP17.08■□□□□ 0.32
HLA-F-220ENST00000434407 TLE1Q04724 770 aa17.08■□□□□ 0.32
HLA-F-220ENST00000434407 TUBA3CQ13748 450 aa17.08■□□□□ 0.32
HLA-F-220ENST00000434407 ZNF169Q14929 603 aaPredicted RBP17.08■□□□□ 0.32
HLA-F-220ENST00000434407 HEPACAMQ14CZ8 416 aa17.08■□□□□ 0.32
HLA-F-220ENST00000434407 FAM71E1Q6IPT2 247 aa17.08■□□□□ 0.32
HLA-F-220ENST00000434407 RPUSD3Q6P087 351 aaKnown RBP17.08■□□□□ 0.32
HLA-F-220ENST00000434407 TUBA3EQ6PEY2 450 aa17.08■□□□□ 0.32
HLA-F-220ENST00000434407 HSDL2Q6YN16 418 aa17.08■□□□□ 0.32
HLA-F-220ENST00000434407 RIT1Q92963 219 aa17.08■□□□□ 0.32
HLA-F-220ENST00000434407 ART5Q96L15 291 aa17.08■□□□□ 0.32
HLA-F-220ENST00000434407 ZNF395Q9H8N7 513 aaPredicted RBP17.08■□□□□ 0.32
HLA-F-220ENST00000434407 CXorf21Q9HAI6 301 aa17.08■□□□□ 0.32
HLA-F-220ENST00000434407 MYNNQ9NPC7 610 aa17.08■□□□□ 0.32
HLA-F-220ENST00000434407 SLAMF7Q9NQ25 335 aa17.08■□□□□ 0.32
HLA-F-220ENST00000434407 EHD3Q9NZN3 535 aa17.08■□□□□ 0.32
HLA-F-220ENST00000434407 ABI3Q9P2A4 366 aa17.08■□□□□ 0.32
HLA-F-220ENST00000434407 TMED5Q9Y3A6 229 aa17.08■□□□□ 0.32
HLA-F-220ENST00000434407 ESPL1Q14674 2120 aa17.08■□□□□ 0.32
HLA-F-220ENST00000434407 TRAV17A0A0B4J275 112 aa17.07■□□□□ 0.32
HLA-F-220ENST00000434407 GABRR3A8MPY1 467 aa17.07■□□□□ 0.32
HLA-F-220ENST00000434407 HRKO00198 91 aa17.07■□□□□ 0.32
HLA-F-220ENST00000434407 DYRK3O43781 588 aa17.07■□□□□ 0.32
HLA-F-220ENST00000434407 OR10H2O60403 315 aa17.07■□□□□ 0.32
HLA-F-220ENST00000434407 SEC22BO75396 215 aa17.07■□□□□ 0.32
HLA-F-220ENST00000434407 HSPA4LO95757 839 aa17.07■□□□□ 0.32
HLA-F-220ENST00000434407 ATP1B1P05026 303 aa17.07■□□□□ 0.32
HLA-F-220ENST00000434407 CD96P40200 585 aa17.07■□□□□ 0.32
HLA-F-220ENST00000434407 SLC1A6P48664 564 aa17.07■□□□□ 0.32
HLA-F-220ENST00000434407 NR6A1Q15406 480 aa17.07■□□□□ 0.32
HLA-F-220ENST00000434407 CEBPEQ15744 281 aa17.07■□□□□ 0.32
HLA-F-220ENST00000434407 ZNF750Q32MQ0 723 aa17.07■□□□□ 0.32
HLA-F-220ENST00000434407 TTMPQ5BVD1 217 aa17.07■□□□□ 0.32
HLA-F-220ENST00000434407 LCE2DQ5TA82 110 aaPredicted RBP17.07■□□□□ 0.32
HLA-F-220ENST00000434407 MDS2Q8NDY4 140 aa17.07■□□□□ 0.32
HLA-F-220ENST00000434407 AGR3Q8TD06 166 aa17.07■□□□□ 0.32
HLA-F-220ENST00000434407 CNRIP1Q96F85 164 aaPredicted RBP17.07■□□□□ 0.32
HLA-F-220ENST00000434407 ATP6V1G3Q96LB4 118 aa17.07■□□□□ 0.32
HLA-F-220ENST00000434407 C3orf30Q96M34 536 aa17.07■□□□□ 0.32
HLA-F-220ENST00000434407 BARD1Q99728 777 aaKnown RBP17.07■□□□□ 0.32
HLA-F-220ENST00000434407 ILKAPQ9H0C8 392 aaPredicted RBP17.07■□□□□ 0.32
HLA-F-220ENST00000434407 TAS2R7Q9NYW3 318 aa17.07■□□□□ 0.32
HLA-F-220ENST00000434407 LUZP4Q9P127 313 aa17.07■□□□□ 0.32
HLA-F-220ENST00000434407 RAP2CQ9Y3L5 183 aa17.07■□□□□ 0.32
HLA-F-220ENST00000434407 POLR3HQ9Y535 204 aaPredicted RBP17.07■□□□□ 0.32
HLA-F-220ENST00000434407 PCDHGB6Q9Y5F9 930 aa17.07■□□□□ 0.32
HLA-F-220ENST00000434407 NUP214P35658 2090 aaPredicted RBP17.07■□□□□ 0.32
HLA-F-220ENST00000434407 EML6Q6ZMW3 1958 aa17.07■□□□□ 0.32
HLA-F-220ENST00000434407 TTLL8A6PVC2 850 aa17.06■□□□□ 0.32
HLA-F-220ENST00000434407 CLPSP04118 112 aa17.06■□□□□ 0.32
HLA-F-220ENST00000434407 CSNK2A2P19784 350 aaPredicted RBP17.06■□□□□ 0.32
HLA-F-220ENST00000434407 DDCP20711 480 aa17.06■□□□□ 0.32
HLA-F-220ENST00000434407 S1PR1P21453 382 aa17.06■□□□□ 0.32
HLA-F-220ENST00000434407 SOX18P35713 384 aa17.06■□□□□ 0.32
HLA-F-220ENST00000434407 ALDH9A1P49189 494 aa17.06■□□□□ 0.32
HLA-F-220ENST00000434407 MLLT10P55197 1068 aa17.06■□□□□ 0.32
HLA-F-220ENST00000434407 RNF4P78317 190 aa17.06■□□□□ 0.32
HLA-F-220ENST00000434407 DUSP2Q05923 314 aa17.06■□□□□ 0.32
HLA-F-220ENST00000434407 MGAT2Q10469 447 aa17.06■□□□□ 0.32
HLA-F-220ENST00000434407 BST1Q10588 318 aa17.06■□□□□ 0.32
HLA-F-220ENST00000434407 FUT7Q11130 342 aa17.06■□□□□ 0.32
HLA-F-220ENST00000434407 STX3Q13277 289 aa17.06■□□□□ 0.32
HLA-F-220ENST00000434407 ZNF267Q14586 743 aaPredicted RBP17.06■□□□□ 0.32
HLA-F-220ENST00000434407 RFTN2Q52LD8 501 aaPredicted RBP17.06■□□□□ 0.32
HLA-F-220ENST00000434407 ZNF468Q5VIY5 522 aaPredicted RBP17.06■□□□□ 0.32
HLA-F-220ENST00000434407 IKBIPQ70UQ0 350 aa17.06■□□□□ 0.32
HLA-F-220ENST00000434407 DDIASQ8IXT1 998 aa17.06■□□□□ 0.32
HLA-F-220ENST00000434407 KIRREL3Q8IZU9 778 aa17.06■□□□□ 0.32
HLA-F-220ENST00000434407 ZNF781Q8N8C0 355 aa17.06■□□□□ 0.32
HLA-F-220ENST00000434407 NUBPLQ8TB37 319 aa17.06■□□□□ 0.32
HLA-F-220ENST00000434407 KLHL29Q96CT2 875 aa17.06■□□□□ 0.32
HLA-F-220ENST00000434407 PAIP2Q9BPZ3 127 aaKnown RBP17.06■□□□□ 0.32
HLA-F-220ENST00000434407 UTP23Q9BRU9 249 aaKnown RBP17.06■□□□□ 0.32
HLA-F-220ENST00000434407 NKIRAS1Q9NYS0 192 aa17.06■□□□□ 0.32
HLA-F-220ENST00000434407 MYOTQ9UBF9 498 aa17.06■□□□□ 0.32
HLA-F-220ENST00000434407 COPS7AQ9UBW8 275 aa17.06■□□□□ 0.32
HLA-F-220ENST00000434407 UTS2RQ9UKP6 389 aa17.06■□□□□ 0.32
HLA-F-220ENST00000434407 EXO1Q9UQ84 846 aaKnown RBP17.06■□□□□ 0.32
HLA-F-220ENST00000434407 YARS2Q9Y2Z4 477 aaKnown RBP17.06■□□□□ 0.32
HLA-F-220ENST00000434407 RELNP78509 3460 aa17.06■□□□□ 0.32
HLA-F-220ENST00000434407 UBR5O95071 2799 aaPredicted RBP17.06■□□□□ 0.32
HLA-F-220ENST00000434407 FCHO1O14526 889 aa17.05■□□□□ 0.32
HLA-F-220ENST00000434407 SNNO75324 88 aaPredicted RBP17.05■□□□□ 0.32
HLA-F-220ENST00000434407 ERAL1O75616 437 aaKnown RBP17.05■□□□□ 0.32
HLA-F-220ENST00000434407 SASH3O75995 380 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms