RNA–Protein interactions for RNA: ENST00000433680.1

TNFAIP3-204, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-204ENST00000433680 ITGAMP11215 1152 aa13.73□□□□□ -0.21
TNFAIP3-204ENST00000433680 PRPS1L1P21108 318 aa13.73□□□□□ -0.21
TNFAIP3-204ENST00000433680 EPHA3P29320 983 aa13.73□□□□□ -0.21
TNFAIP3-204ENST00000433680 MPIP34949 423 aa13.73□□□□□ -0.21
TNFAIP3-204ENST00000433680 HPCAL1P37235 193 aa13.73□□□□□ -0.21
TNFAIP3-204ENST00000433680 GPR143P51810 404 aa13.73□□□□□ -0.21
TNFAIP3-204ENST00000433680 PGDP52209 483 aa13.73□□□□□ -0.21
TNFAIP3-204ENST00000433680 VWA5B1Q5TIE3 1220 aa13.73□□□□□ -0.21
TNFAIP3-204ENST00000433680 EPGNQ6UW88 154 aa13.73□□□□□ -0.21
TNFAIP3-204ENST00000433680 FAM47EQ6ZV65 393 aa13.73□□□□□ -0.21
TNFAIP3-204ENST00000433680 TICAM1Q8IUC6 712 aa13.73□□□□□ -0.21
TNFAIP3-204ENST00000433680 LGI4Q8N135 537 aa13.73□□□□□ -0.21
TNFAIP3-204ENST00000433680 NATD1Q8N6N6 113 aa13.73□□□□□ -0.21
TNFAIP3-204ENST00000433680 APCDD1LQ8NCL9 501 aa13.73□□□□□ -0.21
TNFAIP3-204ENST00000433680 OR1N1Q8NGS0 311 aa13.73□□□□□ -0.21
TNFAIP3-204ENST00000433680 TM9SF4Q92544 642 aa13.73□□□□□ -0.21
TNFAIP3-204ENST00000433680 PPWD1Q96BP3 646 aaKnown RBP13.73□□□□□ -0.21
TNFAIP3-204ENST00000433680 CNRIP1Q96F85 164 aaPredicted RBP13.73□□□□□ -0.21
TNFAIP3-204ENST00000433680 FBXL20Q96IG2 436 aa13.73□□□□□ -0.21
TNFAIP3-204ENST00000433680 ZNF681Q96N22 645 aa13.73□□□□□ -0.21
TNFAIP3-204ENST00000433680 PRPF18Q99633 342 aaKnown RBP13.73□□□□□ -0.21
TNFAIP3-204ENST00000433680 SIKE1Q9BRV8 207 aa13.73□□□□□ -0.21
TNFAIP3-204ENST00000433680 C1orf50Q9BV19 199 aa13.73□□□□□ -0.21
TNFAIP3-204ENST00000433680 NUDT9Q9BW91 350 aa13.73□□□□□ -0.21
TNFAIP3-204ENST00000433680 SEMA4CQ9C0C4 833 aa13.73□□□□□ -0.21
TNFAIP3-204ENST00000433680 CCDC134Q9H6E4 229 aa13.73□□□□□ -0.21
TNFAIP3-204ENST00000433680 ZNF552Q9H707 407 aaPredicted RBP13.73□□□□□ -0.21
TNFAIP3-204ENST00000433680 BAIAP2L1Q9UHR4 511 aa13.73□□□□□ -0.21
TNFAIP3-204ENST00000433680 EXO1Q9UQ84 846 aaKnown RBP13.73□□□□□ -0.21
TNFAIP3-204ENST00000433680 ZNF451Q9Y4E5 1061 aa13.73□□□□□ -0.21
TNFAIP3-204ENST00000433680 ATMQ13315 3056 aa13.72□□□□□ -0.21
TNFAIP3-204ENST00000433680 EDF1O60869 148 aaKnown RBP13.72□□□□□ -0.21
TNFAIP3-204ENST00000433680 SLITRK5O94991 958 aa13.72□□□□□ -0.21
TNFAIP3-204ENST00000433680 DDAH2O95865 285 aa13.72□□□□□ -0.21
TNFAIP3-204ENST00000433680 G6PDP11413 515 aa13.72□□□□□ -0.21
TNFAIP3-204ENST00000433680 FEN1P39748 380 aaKnown RBP13.72□□□□□ -0.21
TNFAIP3-204ENST00000433680 MDH1P40925 334 aaKnown RBP13.72□□□□□ -0.21
TNFAIP3-204ENST00000433680 C21orf58P58505 322 aa13.72□□□□□ -0.21
TNFAIP3-204ENST00000433680 MAP4K2Q12851 820 aa13.72□□□□□ -0.21
TNFAIP3-204ENST00000433680 PDE7AQ13946 482 aa13.72□□□□□ -0.21
TNFAIP3-204ENST00000433680 ISLR2Q6UXK2 745 aa13.72□□□□□ -0.21
TNFAIP3-204ENST00000433680 GALNT12Q8IXK2 581 aa13.72□□□□□ -0.21
TNFAIP3-204ENST00000433680 SLC5A8Q8N695 610 aa13.72□□□□□ -0.21
TNFAIP3-204ENST00000433680 EXD3Q8N9H8 876 aa13.72□□□□□ -0.21
TNFAIP3-204ENST00000433680 OR8K3Q8NH51 312 aa13.72□□□□□ -0.21
TNFAIP3-204ENST00000433680 CEP70Q8NHQ1 597 aa13.72□□□□□ -0.21
TNFAIP3-204ENST00000433680 SLC2A12Q8TD20 617 aa13.72□□□□□ -0.21
TNFAIP3-204ENST00000433680 BRIX1Q8TDN6 353 aaKnown RBP13.72□□□□□ -0.21
TNFAIP3-204ENST00000433680 STON2Q8WXE9 905 aa13.72□□□□□ -0.21
TNFAIP3-204ENST00000433680 PSMF1Q92530 271 aa13.72□□□□□ -0.21
TNFAIP3-204ENST00000433680 NCLNQ969V3 563 aa13.72□□□□□ -0.21
TNFAIP3-204ENST00000433680 EXOSC8Q96B26 276 aaKnown RBP13.72□□□□□ -0.21
TNFAIP3-204ENST00000433680 PPCDCQ96CD2 204 aa13.72□□□□□ -0.21
TNFAIP3-204ENST00000433680 ERP27Q96DN0 273 aa13.72□□□□□ -0.21
TNFAIP3-204ENST00000433680 SENP5Q96HI0 755 aaPredicted RBP13.72□□□□□ -0.21
TNFAIP3-204ENST00000433680 ZNF354BQ96LW1 612 aa13.72□□□□□ -0.21
TNFAIP3-204ENST00000433680 BBS4Q96RK4 519 aa13.72□□□□□ -0.21
TNFAIP3-204ENST00000433680 LMF1Q96S06 567 aa13.72□□□□□ -0.21
TNFAIP3-204ENST00000433680 DEFB126Q9BYW3 111 aa13.72□□□□□ -0.21
TNFAIP3-204ENST00000433680 WDR55Q9H6Y2 383 aaPredicted RBP13.72□□□□□ -0.21
TNFAIP3-204ENST00000433680 CXorf21Q9HAI6 301 aa13.72□□□□□ -0.21
TNFAIP3-204ENST00000433680 ATAD3AQ9NVI7 634 aa13.72□□□□□ -0.21
TNFAIP3-204ENST00000433680 ATP6V1HQ9UI12 483 aa13.72□□□□□ -0.21
TNFAIP3-204ENST00000433680 OR6C76A6NM76 312 aa13.71□□□□□ -0.21
TNFAIP3-204ENST00000433680 MYO1GB0I1T2 1018 aa13.71□□□□□ -0.21
TNFAIP3-204ENST00000433680 ZFAND5O76080 213 aa13.71□□□□□ -0.21
TNFAIP3-204ENST00000433680 LRATO95237 230 aa13.71□□□□□ -0.21
TNFAIP3-204ENST00000433680 IGKV3-11P04433 115 aa13.71□□□□□ -0.21
TNFAIP3-204ENST00000433680 CELA2AP08217 269 aa13.71□□□□□ -0.21
TNFAIP3-204ENST00000433680 NT5EP21589 574 aa13.71□□□□□ -0.21
TNFAIP3-204ENST00000433680 NTSP30990 170 aa13.71□□□□□ -0.21
TNFAIP3-204ENST00000433680 SOX11P35716 441 aa13.71□□□□□ -0.21
TNFAIP3-204ENST00000433680 CLDN8P56748 225 aa13.71□□□□□ -0.21
TNFAIP3-204ENST00000433680 PTGR1Q14914 329 aa13.71□□□□□ -0.21
TNFAIP3-204ENST00000433680 MEP1AQ16819 746 aa13.71□□□□□ -0.21
TNFAIP3-204ENST00000433680 PRICKLE4Q2TBC4 344 aa13.71□□□□□ -0.21
TNFAIP3-204ENST00000433680 SLC9B1Q4ZJI4 515 aa13.71□□□□□ -0.21
TNFAIP3-204ENST00000433680 LACTB2Q53H82 288 aaPredicted RBP13.71□□□□□ -0.21
TNFAIP3-204ENST00000433680 NXNQ6DKJ4 435 aa13.71□□□□□ -0.21
TNFAIP3-204ENST00000433680 PCSK4Q6UW60 755 aa13.71□□□□□ -0.21
TNFAIP3-204ENST00000433680 IGFL2Q6UWQ7 119 aa13.71□□□□□ -0.21
TNFAIP3-204ENST00000433680 IGFL3Q6UXB1 125 aa13.71□□□□□ -0.21
TNFAIP3-204ENST00000433680 HSDL2Q6YN16 418 aa13.71□□□□□ -0.21
TNFAIP3-204ENST00000433680 ACAD11Q709F0 780 aa13.71□□□□□ -0.21
TNFAIP3-204ENST00000433680 MAVSQ7Z434 540 aa13.71□□□□□ -0.21
TNFAIP3-204ENST00000433680 ARMC10Q8N2F6 343 aa13.71□□□□□ -0.21
TNFAIP3-204ENST00000433680 OR7G1Q8NGA0 311 aa13.71□□□□□ -0.21
TNFAIP3-204ENST00000433680 OR5L2Q8NGL0 311 aa13.71□□□□□ -0.21
TNFAIP3-204ENST00000433680 CLHC1Q8NHS4 586 aa13.71□□□□□ -0.21
TNFAIP3-204ENST00000433680 ZNF675Q8TD23 568 aa13.71□□□□□ -0.21
TNFAIP3-204ENST00000433680 ZNF721Q8TF20 911 aa13.71□□□□□ -0.21
TNFAIP3-204ENST00000433680 GFM2Q969S9 779 aaKnown RBP13.71□□□□□ -0.21
TNFAIP3-204ENST00000433680 OR8D2Q9GZM6 311 aa13.71□□□□□ -0.21
TNFAIP3-204ENST00000433680 SLC25A18Q9H1K4 315 aa13.71□□□□□ -0.21
TNFAIP3-204ENST00000433680 EPS8L2Q9H6S3 715 aa13.71□□□□□ -0.21
TNFAIP3-204ENST00000433680 RYDENQ9NUL5 291 aaKnown RBP13.71□□□□□ -0.21
TNFAIP3-204ENST00000433680 PTGFRNQ9P2B2 879 aa13.71□□□□□ -0.21
TNFAIP3-204ENST00000433680 MED13Q9UHV7 2174 aa13.71□□□□□ -0.22
TNFAIP3-204ENST00000433680 GOLGA8QA0A0J9YX86 632 aa13.7□□□□□ -0.22
TNFAIP3-204ENST00000433680 TRBV11-1A0A0K0K1C0 115 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms