RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 ACAD11Q709F0 780 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 ZZZ3Q8IYH5 903 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 MMP21Q8N119 569 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 OR8K3Q8NH51 312 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 SLC22A8Q8TCC7 542 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 UBTD2Q8WUN7 234 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 RIT1Q92963 219 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 SPACA9Q96E40 222 aaPredicted RBP13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 SGCZQ96LD1 299 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 WWTR1Q9GZV5 400 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 VPS11Q9H270 941 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 ZNF703Q9H7S9 590 aaPredicted RBP13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 SNX15Q9NRS6 342 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 TEX10Q9NXF1 929 aaPredicted RBP13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 ACOT9Q9Y305 439 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 ASB4Q9Y574 426 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 A0A096LPK6 155 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 A0A1B0GVC2 190 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 C2orf72A6NCS6 295 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 FIGNL2A6NMB9 653 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 AQP7O14520 342 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 KLK8O60259 260 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 AIFM1O95831 613 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 HOXD4P09016 255 aaPredicted RBP13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 FAM58BPP0C7Q3 252 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 TSPAN8P19075 237 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 CASQ1P31415 396 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 BSGP35613 385 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 ZFP36L2P47974 494 aaKnown RBP13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 AGFG1P52594 562 aaKnown RBP13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 ART1P52961 327 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 CBLBQ13191 982 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 MPEG1Q2M385 716 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 SYT10Q6XYQ8 523 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 RGS9BPQ6ZS82 235 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 SLC29A4Q7RTT9 530 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 OR52B6Q8NGF0 335 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 PHF21BQ96EK2 531 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 FBXL20Q96IG2 436 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 NSUN5Q96P11 429 aaKnown RBP13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 IPPKQ9H8X2 491 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 SH2D2AQ9NP31 389 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 RNF14Q9UBS8 474 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 CHCHD2Q9Y6H1 151 aaPredicted RBP13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 HRNRQ86YZ3 2850 aaPredicted RBP13.1□□□□□ -0.31
SMARCE1-205ENST00000431889 A0A0A6YYD5 115 aa13.1□□□□□ -0.31
SMARCE1-205ENST00000431889 C15orf38-AP3S2A0A0A6YYH1 394 aa13.1□□□□□ -0.31
SMARCE1-205ENST00000431889 OR7A17O14581 309 aa13.1□□□□□ -0.31
SMARCE1-205ENST00000431889 TRAPPC6AO75865 159 aa13.1□□□□□ -0.31
SMARCE1-205ENST00000431889 ZWINTO95229 277 aa13.1□□□□□ -0.31
SMARCE1-205ENST00000431889 ACSL3O95573 720 aa13.1□□□□□ -0.31
SMARCE1-205ENST00000431889 GPR75O95800 540 aa13.1□□□□□ -0.31
SMARCE1-205ENST00000431889 NR2F6P10588 404 aa13.1□□□□□ -0.31
SMARCE1-205ENST00000431889 CAPN3P20807 821 aa13.1□□□□□ -0.31
SMARCE1-205ENST00000431889 GDF1P27539 372 aa13.1□□□□□ -0.31
SMARCE1-205ENST00000431889 STX2P32856 288 aa13.1□□□□□ -0.31
SMARCE1-205ENST00000431889 SLC37A1P57057 533 aa13.1□□□□□ -0.31
SMARCE1-205ENST00000431889 EBPQ15125 230 aaKnown RBP13.1□□□□□ -0.31
SMARCE1-205ENST00000431889 TOMM20Q15388 145 aa13.1□□□□□ -0.31
SMARCE1-205ENST00000431889 PLXDC2Q6UX71 529 aa13.1□□□□□ -0.31
SMARCE1-205ENST00000431889 SEM1Q6ZVN7 128 aa13.1□□□□□ -0.31
SMARCE1-205ENST00000431889 NAXEQ8NCW5 288 aa13.1□□□□□ -0.31
SMARCE1-205ENST00000431889 NUBPLQ8TB37 319 aa13.1□□□□□ -0.31
SMARCE1-205ENST00000431889 PAQR8Q8TEZ7 354 aa13.1□□□□□ -0.31
SMARCE1-205ENST00000431889 DIO2Q92813 273 aa13.1□□□□□ -0.31
SMARCE1-205ENST00000431889 TANKQ92844 425 aa13.1□□□□□ -0.31
SMARCE1-205ENST00000431889 DOHHQ9BU89 302 aa13.1□□□□□ -0.31
SMARCE1-205ENST00000431889 NOL11Q9H8H0 719 aaKnown RBP13.1□□□□□ -0.31
SMARCE1-205ENST00000431889 ZFP64Q9NPA5 681 aa13.1□□□□□ -0.31
SMARCE1-205ENST00000431889 PHF11Q9UIL8 331 aa13.1□□□□□ -0.31
SMARCE1-205ENST00000431889 CNOT11Q9UKZ1 510 aaKnown RBP13.1□□□□□ -0.31
SMARCE1-205ENST00000431889 SLC6A5Q9Y345 797 aa13.1□□□□□ -0.31
SMARCE1-205ENST00000431889 MAP1AP78559 2803 aaPredicted RBP13.09□□□□□ -0.31
SMARCE1-205ENST00000431889 A0A1B0GTL3 188 aa13.09□□□□□ -0.31
SMARCE1-205ENST00000431889 OR14I1A6ND48 311 aa13.09□□□□□ -0.31
SMARCE1-205ENST00000431889 DYRK3O43781 588 aa13.09□□□□□ -0.31
SMARCE1-205ENST00000431889 GSTA2P09210 222 aa13.09□□□□□ -0.31
SMARCE1-205ENST00000431889 TLX1P31314 330 aaPredicted RBP13.09□□□□□ -0.31
SMARCE1-205ENST00000431889 UQCRC1P31930 480 aa13.09□□□□□ -0.31
SMARCE1-205ENST00000431889 BUD31P41223 144 aaPredicted RBP13.09□□□□□ -0.31
SMARCE1-205ENST00000431889 MRM1Q6IN84 353 aaKnown RBP13.09□□□□□ -0.31
SMARCE1-205ENST00000431889 CYS1Q717R9 158 aa13.09□□□□□ -0.31
SMARCE1-205ENST00000431889 ST13P4Q8IZP2 240 aaPredicted RBP13.09□□□□□ -0.31
SMARCE1-205ENST00000431889 ZCCHC7Q8N3Z6 543 aaKnown RBP13.09□□□□□ -0.31
SMARCE1-205ENST00000431889 PTGR2Q8N8N7 351 aaPredicted RBP13.09□□□□□ -0.31
SMARCE1-205ENST00000431889 SIMC1Q8NDZ2 872 aa13.09□□□□□ -0.31
SMARCE1-205ENST00000431889 TNIP2Q8NFZ5 429 aa13.09□□□□□ -0.31
SMARCE1-205ENST00000431889 UHMK1Q8TAS1 419 aaKnown RBP13.09□□□□□ -0.31
SMARCE1-205ENST00000431889 SARAFQ96BY9 339 aa13.09□□□□□ -0.31
SMARCE1-205ENST00000431889 GPR78Q96P69 363 aa13.09□□□□□ -0.31
SMARCE1-205ENST00000431889 GNRHR2Q96P88 292 aa13.09□□□□□ -0.31
SMARCE1-205ENST00000431889 GPATCH1Q9BRR8 931 aaKnown RBP13.09□□□□□ -0.31
SMARCE1-205ENST00000431889 FARSBQ9NSD9 589 aaKnown RBP13.09□□□□□ -0.31
SMARCE1-205ENST00000431889 MS4A12Q9NXJ0 267 aa13.09□□□□□ -0.31
SMARCE1-205ENST00000431889 DTX4Q9Y2E6 619 aa13.09□□□□□ -0.31
SMARCE1-205ENST00000431889 L3MBTL1Q9Y468 752 aa13.09□□□□□ -0.31
SMARCE1-205ENST00000431889 SPG11Q96JI7 2443 aa13.09□□□□□ -0.31
SMARCE1-205ENST00000431889 EXPH5Q8NEV8 1989 aa13.09□□□□□ -0.31
SMARCE1-205ENST00000431889 MED12Q93074 2177 aa13.08□□□□□ -0.32
SMARCE1-205ENST00000431889 A0A087X1B8 175 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms