RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 SYPL1Q16563 259 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 DUSP7Q16829 419 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 USP51Q70EK9 711 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 CYP4Z1Q86W10 505 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 DCP2Q8IU60 420 aaKnown RBP15.73■□□□□ 0.11
USHBP1-203ENST00000431146 ZFP28Q8NHY6 868 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 FAM174AQ8TBP5 190 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 DTNBP1Q96EV8 351 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 RSPO3Q9BXY4 272 aaPredicted RBP15.73■□□□□ 0.11
USHBP1-203ENST00000431146 GRIP2Q9C0E4 1043 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 FAM118AQ9NWS6 357 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 USE1Q9NZ43 259 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 NDUFAF4Q9P032 175 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 PDP1Q9P0J1 537 aaPredicted RBP15.73■□□□□ 0.11
USHBP1-203ENST00000431146 KCMF1Q9P0J7 381 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 PADI2Q9Y2J8 665 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 J3KTA2 159 aa15.72■□□□□ 0.11
USHBP1-203ENST00000431146 TFPTP0C1Z6 253 aa15.72■□□□□ 0.11
USHBP1-203ENST00000431146 CSNK2A2P19784 350 aaPredicted RBP15.72■□□□□ 0.11
USHBP1-203ENST00000431146 DNAJA1P31689 397 aaKnown RBP15.72■□□□□ 0.11
USHBP1-203ENST00000431146 MC3RP41968 323 aa15.72■□□□□ 0.11
USHBP1-203ENST00000431146 PPM1FP49593 454 aaPredicted RBP15.72■□□□□ 0.11
USHBP1-203ENST00000431146 DAPP51397 102 aa15.72■□□□□ 0.11
USHBP1-203ENST00000431146 LASP1Q14847 261 aaKnown RBP15.72■□□□□ 0.11
USHBP1-203ENST00000431146 IFI44LQ53G44 452 aa15.72■□□□□ 0.11
USHBP1-203ENST00000431146 RNF44Q7L0R7 432 aa15.72■□□□□ 0.11
USHBP1-203ENST00000431146 PIWIL3Q7Z3Z3 882 aaKnown RBP15.72■□□□□ 0.11
USHBP1-203ENST00000431146 HMGN2P46Q86SG4 172 aa15.72■□□□□ 0.11
USHBP1-203ENST00000431146 PATL1Q86TB9 770 aaKnown RBP15.72■□□□□ 0.11
USHBP1-203ENST00000431146 METTL25Q8N6Q8 603 aa15.72■□□□□ 0.11
USHBP1-203ENST00000431146 TSPAN14Q8NG11 270 aa15.72■□□□□ 0.11
USHBP1-203ENST00000431146 KAT2AQ92830 837 aa15.72■□□□□ 0.11
USHBP1-203ENST00000431146 COL26A1Q96A83 441 aa15.72■□□□□ 0.11
USHBP1-203ENST00000431146 MRPS26Q9BYN8 205 aaKnown RBP15.72■□□□□ 0.11
USHBP1-203ENST00000431146 REEP1Q9H902 201 aa15.72■□□□□ 0.11
USHBP1-203ENST00000431146 A4GALTQ9NPC4 353 aa15.72■□□□□ 0.11
USHBP1-203ENST00000431146 THUMPD1Q9NXG2 353 aaKnown RBP15.72■□□□□ 0.11
USHBP1-203ENST00000431146 IFT80Q9P2H3 777 aaPredicted RBP15.72■□□□□ 0.11
USHBP1-203ENST00000431146 POMT2Q9UKY4 750 aa15.72■□□□□ 0.11
USHBP1-203ENST00000431146 ENO4A6NNW6 628 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 H0YAE9 185 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 B3GALT2O43825 422 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 UBXN7O94888 489 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 FPR1P21462 350 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 MATN1P21941 496 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 FUT4P22083 530 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 CDH3P22223 829 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 TNFRSF17Q02223 184 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 ID2Q02363 134 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 APOFQ13790 326 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 LIN52Q52LA3 116 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 ABHD13Q7L211 337 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 GJD3Q8N144 294 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 OR5T3Q8NGG3 340 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 OR52J3Q8NH60 311 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 LZICQ8WZA0 190 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 C16orf58Q96GQ5 468 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 C10orf90Q96M02 699 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 ZNF681Q96N22 645 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 SERINC2Q96SA4 455 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 EQTNQ9NQ60 294 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 UCKL1Q9NWZ5 548 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 ZNF451Q9Y4E5 1061 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 KLK4Q9Y5K2 254 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 ZNF780BQ9Y6R6 833 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 URADA6NGE7 173 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 SLC28A2O43868 658 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 OR6B1O95007 311 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 HMGN2P05204 90 aaKnown RBP15.71■□□□□ 0.11
USHBP1-203ENST00000431146 CYP4B1P13584 511 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 ALOX12P18054 663 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 IGFBP5P24593 272 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 MPIP34949 423 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 BUD31P41223 144 aaPredicted RBP15.71■□□□□ 0.11
USHBP1-203ENST00000431146 CLCN2P51788 898 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 ARHGDIAP52565 204 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 PUS10Q3MIT2 529 aaKnown RBP15.71■□□□□ 0.11
USHBP1-203ENST00000431146 GKN2Q86XP6 184 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 APLFQ8IW19 511 aaPredicted RBP15.71■□□□□ 0.11
USHBP1-203ENST00000431146 CSNK1A1LQ8N752 337 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 AVL9Q8NBF6 648 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 C1orf216Q8TAB5 229 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 DOK4Q8TEW6 326 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 CLDN23Q96B33 292 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 TBC1D20Q96BZ9 403 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 SPACA7Q96KW9 195 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 CCDC3Q9BQI4 270 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 CLK4Q9HAZ1 481 aaKnown RBP15.71■□□□□ 0.11
USHBP1-203ENST00000431146 GIMAP4Q9NUV9 329 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 DAPP1Q9UN19 280 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 SIT1Q9Y3P8 196 aa15.71■□□□□ 0.11
USHBP1-203ENST00000431146 TMEM131Q92545 1883 aa15.7■□□□□ 0.1
USHBP1-203ENST00000431146 CABIN1Q9Y6J0 2220 aa15.7■□□□□ 0.1
USHBP1-203ENST00000431146 FRYLO94915 3013 aa15.7■□□□□ 0.1
USHBP1-203ENST00000431146 SLC9B1P1A6NJY1 282 aa15.7■□□□□ 0.1
USHBP1-203ENST00000431146 K7ESF4 209 aa15.7■□□□□ 0.1
USHBP1-203ENST00000431146 RECKO95980 971 aa15.7■□□□□ 0.1
USHBP1-203ENST00000431146 ELK4P28324 431 aa15.7■□□□□ 0.1
USHBP1-203ENST00000431146 CXCL12P48061 93 aa15.7■□□□□ 0.1
USHBP1-203ENST00000431146 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms