RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 ZNF704Q6ZNC4 412 aaPredicted RBP4.89□□□□□ -1.63
RIF1-203ENST00000428287 UTS2BQ765I0 119 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 RRM2BQ7LG56 351 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 KIAA0907Q7Z7F0 614 aaPredicted RBP4.89□□□□□ -1.63
RIF1-203ENST00000428287 MCATQ8IVS2 390 aaKnown RBP4.89□□□□□ -1.63
RIF1-203ENST00000428287 BBS7Q8IWZ6 715 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 LGI4Q8N135 537 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 POGLUT1Q8NBL1 392 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 DMBX1Q8NFW5 382 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 GEMIN6Q8WXD5 167 aaKnown RBP4.89□□□□□ -1.63
RIF1-203ENST00000428287 MYLPFQ96A32 169 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 GJD4Q96KN9 370 aaPredicted RBP4.89□□□□□ -1.63
RIF1-203ENST00000428287 SEMA4CQ9C0C4 833 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 PPIL3Q9H2H8 161 aaKnown RBP4.89□□□□□ -1.63
RIF1-203ENST00000428287 CRISPLD1Q9H336 500 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 POLMQ9NP87 494 aaPredicted RBP4.89□□□□□ -1.63
RIF1-203ENST00000428287 SNTG1Q9NSN8 517 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 CLN6Q9NWW5 311 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 ICKQ9UPZ9 632 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 RPL36Q9Y3U8 105 aaKnown RBP4.89□□□□□ -1.63
RIF1-203ENST00000428287 SNX10Q9Y5X0 201 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 H3BUI4 141 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 PRODHO43272 600 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 RAD1O60671 282 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 MMP20O60882 483 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 TMEM127O75204 238 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 FHP07954 510 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 COL6A1P12109 1028 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 EPHA5P54756 1037 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 MPPE1Q53F39 396 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 FBXO48Q5FWF7 155 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 NADSYN1Q6IA69 706 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 ELP2Q6IA86 826 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 OVOS1Q6IE37 1185 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 C16orf62Q7Z3J2 963 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 SLC37A3Q8NCC5 494 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 OR4K2Q8NGD2 314 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 LINGO1Q96FE5 620 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 POLDIP3Q9BY77 421 aaKnown RBP4.89□□□□□ -1.63
RIF1-203ENST00000428287 ZNF436Q9C0F3 470 aaPredicted RBP4.89□□□□□ -1.63
RIF1-203ENST00000428287 GALNT9Q9HCQ5 603 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 FAM105AQ9NUU6 356 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 POLR3HQ9Y535 204 aaPredicted RBP4.89□□□□□ -1.63
RIF1-203ENST00000428287 DCHS1Q96JQ0 3298 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 KCNE1BA0A087WTH5 132 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 TRBV5-4A0A0C4DH59 114 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 SUPT3HB4E1H0 165 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 F8W036 122 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 DFFAO00273 331 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 PRAMEF1O95521 474 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 RAP2BP61225 183 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 FABP5Q01469 135 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 GNA13Q14344 377 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 ZNF169Q14929 603 aaPredicted RBP4.89□□□□□ -1.63
RIF1-203ENST00000428287 FAM214AQ32MH5 1076 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 TRIQKQ629K1 86 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 SLC22A10Q63ZE4 541 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 DNM1P46Q6ZS02 220 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 BTN2A1Q7KYR7 527 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 GPRIN1Q7Z2K8 1008 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 LUZP2Q86TE4 346 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 ANKRD46Q86W74 232 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 AKAP1Q92667 903 aaKnown RBP eCLIP4.89□□□□□ -1.63
RIF1-203ENST00000428287 NANSQ9NR45 359 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 TINAGQ9UJW2 476 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 MGAT4AQ9UM21 535 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 NPFFR2Q9Y5X5 522 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 ASH1LQ9NR48 2969 aaKnown RBP4.89□□□□□ -1.63
RIF1-203ENST00000428287 ANKRD61A6NGH8 418 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 CCL22O00626 93 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 FPGTO14772 594 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 YY2O15391 372 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 CDRT1O95170 752 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 CNPP09543 421 aaKnown RBP4.89□□□□□ -1.63
RIF1-203ENST00000428287 TFPIP10646 304 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 OSMP13725 252 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 TYRP1P17643 537 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 SLC6A4P31645 630 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 RPL9P32969 192 aaKnown RBP4.89□□□□□ -1.63
RIF1-203ENST00000428287 MMP15P51511 669 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 SOX4Q06945 474 aaPredicted RBP4.89□□□□□ -1.63
RIF1-203ENST00000428287 PUM1Q14671 1186 aaKnown RBP eCLIP4.89□□□□□ -1.63
RIF1-203ENST00000428287 C3P1Q6ZMU1 363 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 GOLGA7Q7Z5G4 137 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 NR2C2APQ86WQ0 139 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 STPG2Q8N412 459 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 OR5T2Q8NGG2 359 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 OR13C4Q8NGS5 318 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 OR2T35Q8NGX2 323 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 PPTC7Q8NI37 304 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 BCL7CQ8WUZ0 217 aaPredicted RBP4.89□□□□□ -1.63
RIF1-203ENST00000428287 FUBP3Q96I24 572 aaKnown RBP eCLIP4.89□□□□□ -1.63
RIF1-203ENST00000428287 KCNC2Q96PR1 638 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 CDK15Q96Q40 435 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 PANX1Q96RD7 426 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 YIPF4Q9BSR8 244 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 H2AFJQ9BTM1 129 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 SARGQ9BW04 601 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 OR51J1Q9H342 316 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 BTNL2Q9UIR0 455 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms