RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 MYOTQ9UBF9 498 aa13.8□□□□□ -0.2
RTN4-210ENST00000427710 HEY2Q9UBP5 337 aa13.8□□□□□ -0.2
RTN4-210ENST00000427710 RAB21Q9UL25 225 aa13.8□□□□□ -0.2
RTN4-210ENST00000427710 OSGIN2Q9Y236 505 aa13.8□□□□□ -0.2
RTN4-210ENST00000427710 STK38LQ9Y2H1 464 aa13.8□□□□□ -0.2
RTN4-210ENST00000427710 FIS1Q9Y3D6 152 aa13.8□□□□□ -0.2
RTN4-210ENST00000427710 PCDHA9Q9Y5H5 950 aa13.8□□□□□ -0.2
RTN4-210ENST00000427710 PTGDR2Q9Y5Y4 395 aa13.8□□□□□ -0.2
RTN4-210ENST00000427710 SYNDIG1LA6NDD5 238 aa13.79□□□□□ -0.2
RTN4-210ENST00000427710 PCDH7O60245 1069 aa13.79□□□□□ -0.2
RTN4-210ENST00000427710 NME2P1O60361 137 aa13.79□□□□□ -0.2
RTN4-210ENST00000427710 ERAL1O75616 437 aaKnown RBP13.79□□□□□ -0.2
RTN4-210ENST00000427710 IGKV3-11P04433 115 aa13.79□□□□□ -0.2
RTN4-210ENST00000427710 HSD3B1P14060 373 aa13.79□□□□□ -0.2
RTN4-210ENST00000427710 NME2P22392 152 aa13.79□□□□□ -0.2
RTN4-210ENST00000427710 HSD3B2P26439 372 aa13.79□□□□□ -0.2
RTN4-210ENST00000427710 SSTR4P31391 388 aa13.79□□□□□ -0.2
RTN4-210ENST00000427710 TRHRP34981 398 aaPredicted RBP13.79□□□□□ -0.2
RTN4-210ENST00000427710 FEN1P39748 380 aaKnown RBP13.79□□□□□ -0.2
RTN4-210ENST00000427710 RFC3P40938 356 aa13.79□□□□□ -0.2
RTN4-210ENST00000427710 XKP51811 444 aa13.79□□□□□ -0.2
RTN4-210ENST00000427710 GPR85P60893 370 aa13.79□□□□□ -0.2
RTN4-210ENST00000427710 DUSP2Q05923 314 aa13.79□□□□□ -0.2
RTN4-210ENST00000427710 INAQ16352 499 aa13.79□□□□□ -0.2
RTN4-210ENST00000427710 KRT71Q3SY84 523 aa13.79□□□□□ -0.2
RTN4-210ENST00000427710 CLEC6AQ6EIG7 209 aa13.79□□□□□ -0.2
RTN4-210ENST00000427710 GFRALQ6UXV0 394 aa13.79□□□□□ -0.2
RTN4-210ENST00000427710 MREGQ8N565 214 aa13.79□□□□□ -0.2
RTN4-210ENST00000427710 CPSF7Q8N684 471 aaKnown RBP13.79□□□□□ -0.2
RTN4-210ENST00000427710 HORMAD2Q8N7B1 307 aa13.79□□□□□ -0.2
RTN4-210ENST00000427710 TMEM178AQ8NBL3 297 aa13.79□□□□□ -0.2
RTN4-210ENST00000427710 OR4K14Q8NGD5 310 aa13.79□□□□□ -0.2
RTN4-210ENST00000427710 TCP10LQ8TDR4 215 aa13.79□□□□□ -0.2
RTN4-210ENST00000427710 ASB15Q8WXK1 588 aa13.79□□□□□ -0.2
RTN4-210ENST00000427710 RIT1Q92963 219 aa13.79□□□□□ -0.2
RTN4-210ENST00000427710 RASL10BQ96S79 203 aa13.79□□□□□ -0.2
RTN4-210ENST00000427710 NMRK1Q9NWW6 199 aa13.79□□□□□ -0.2
RTN4-210ENST00000427710 MKS1Q9NXB0 559 aa13.79□□□□□ -0.2
RTN4-210ENST00000427710 COPS7AQ9UBW8 275 aa13.79□□□□□ -0.2
RTN4-210ENST00000427710 CES1P1Q9UKY3 287 aa13.79□□□□□ -0.2
RTN4-210ENST00000427710 ERVK-11Q9UQG0 969 aa13.79□□□□□ -0.2
RTN4-210ENST00000427710 YARS2Q9Y2Z4 477 aaKnown RBP13.79□□□□□ -0.2
RTN4-210ENST00000427710 A8MVJ9 347 aa13.78□□□□□ -0.2
RTN4-210ENST00000427710 G3V3Y1 287 aa13.78□□□□□ -0.2
RTN4-210ENST00000427710 CLPSP04118 112 aa13.78□□□□□ -0.2
RTN4-210ENST00000427710 IL3P08700 152 aa13.78□□□□□ -0.2
RTN4-210ENST00000427710 SLC35E2P0CK97 266 aa13.78□□□□□ -0.2
RTN4-210ENST00000427710 NT5EP21589 574 aa13.78□□□□□ -0.2
RTN4-210ENST00000427710 MEOX1P50221 254 aa13.78□□□□□ -0.2
RTN4-210ENST00000427710 ZNF844Q08AG5 666 aa13.78□□□□□ -0.2
RTN4-210ENST00000427710 ASPHQ12797 758 aa13.78□□□□□ -0.2
RTN4-210ENST00000427710 IMPG1Q17R60 797 aa13.78□□□□□ -0.2
RTN4-210ENST00000427710 RNFT1Q5M7Z0 435 aa13.78□□□□□ -0.2
RTN4-210ENST00000427710 SPDYAQ5MJ70 313 aa13.78□□□□□ -0.2
RTN4-210ENST00000427710 FAM111BQ6SJ93 734 aa13.78□□□□□ -0.2
RTN4-210ENST00000427710 ZCCHC23Q6ZST2 131 aa13.78□□□□□ -0.2
RTN4-210ENST00000427710 SULF2Q8IWU5 870 aa13.78□□□□□ -0.2
RTN4-210ENST00000427710 DNAJB8Q8NHS0 232 aa13.78□□□□□ -0.2
RTN4-210ENST00000427710 TMEM125Q96AQ2 219 aa13.78□□□□□ -0.2
RTN4-210ENST00000427710 FBXL20Q96IG2 436 aa13.78□□□□□ -0.2
RTN4-210ENST00000427710 FRMD6Q96NE9 622 aa13.78□□□□□ -0.2
RTN4-210ENST00000427710 GAL3ST4Q96RP7 486 aa13.78□□□□□ -0.2
RTN4-210ENST00000427710 TRIM45Q9H8W5 580 aaPredicted RBP13.78□□□□□ -0.2
RTN4-210ENST00000427710 HPF1Q9NWY4 346 aa13.78□□□□□ -0.2
RTN4-210ENST00000427710 MCM8Q9UJA3 840 aa13.78□□□□□ -0.2
RTN4-210ENST00000427710 ERRFI1Q9UJM3 462 aaPredicted RBP13.78□□□□□ -0.2
RTN4-210ENST00000427710 MID2Q9UJV3 735 aa13.78□□□□□ -0.2
RTN4-210ENST00000427710 DLGAP4Q9Y2H0 992 aa13.78□□□□□ -0.2
RTN4-210ENST00000427710 PCDHGB6Q9Y5F9 930 aa13.78□□□□□ -0.2
RTN4-210ENST00000427710 A0A0G2JMM0 328 aa13.77□□□□□ -0.21
RTN4-210ENST00000427710 A0A1W2PPB8 328 aa13.77□□□□□ -0.21
RTN4-210ENST00000427710 GNG14A0A1W2PPG7 69 aa13.77□□□□□ -0.21
RTN4-210ENST00000427710 A0A1W2PRS3 328 aa13.77□□□□□ -0.21
RTN4-210ENST00000427710 PINLYPA6NC86 204 aa13.77□□□□□ -0.21
RTN4-210ENST00000427710 KIR3DP1A8MWS1 328 aa13.77□□□□□ -0.21
RTN4-210ENST00000427710 NPIPA5E9PKD4 350 aa13.77□□□□□ -0.21
RTN4-210ENST00000427710 DYRK3O43781 588 aa13.77□□□□□ -0.21
RTN4-210ENST00000427710 TRIM13O60858 407 aa13.77□□□□□ -0.21
RTN4-210ENST00000427710 UNC5CO95185 931 aa13.77□□□□□ -0.21
RTN4-210ENST00000427710 CRYABP02511 175 aaKnown RBP13.77□□□□□ -0.21
RTN4-210ENST00000427710 CHRNGP07510 517 aa13.77□□□□□ -0.21
RTN4-210ENST00000427710 CPMP14384 443 aa13.77□□□□□ -0.21
RTN4-210ENST00000427710 DEKP35659 375 aaKnown RBP13.77□□□□□ -0.21
RTN4-210ENST00000427710 ALDH6A1Q02252 535 aaKnown RBP13.77□□□□□ -0.21
RTN4-210ENST00000427710 ACSM2AQ08AH3 577 aa13.77□□□□□ -0.21
RTN4-210ENST00000427710 BIKQ13323 160 aa13.77□□□□□ -0.21
RTN4-210ENST00000427710 LTB4RQ15722 352 aa13.77□□□□□ -0.21
RTN4-210ENST00000427710 SPRED3Q2MJR0 410 aa13.77□□□□□ -0.21
RTN4-210ENST00000427710 ACSM2BQ68CK6 577 aa13.77□□□□□ -0.21
RTN4-210ENST00000427710 SLC48A1Q6P1K1 146 aa13.77□□□□□ -0.21
RTN4-210ENST00000427710 RNF111Q6ZNA4 994 aa13.77□□□□□ -0.21
RTN4-210ENST00000427710 GBP7Q8N8V2 638 aaPredicted RBP13.77□□□□□ -0.21
RTN4-210ENST00000427710 ADCY4Q8NFM4 1077 aa13.77□□□□□ -0.21
RTN4-210ENST00000427710 CDC26Q8NHZ8 85 aa13.77□□□□□ -0.21
RTN4-210ENST00000427710 C16orf78Q8WTQ4 265 aa13.77□□□□□ -0.21
RTN4-210ENST00000427710 KLHL29Q96CT2 875 aa13.77□□□□□ -0.21
RTN4-210ENST00000427710 ART5Q96L15 291 aa13.77□□□□□ -0.21
RTN4-210ENST00000427710 ZIM3Q96PE6 472 aa13.77□□□□□ -0.21
RTN4-210ENST00000427710 SMC6Q96SB8 1091 aa13.77□□□□□ -0.21
RTN4-210ENST00000427710 PELOQ9BRX2 385 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms