RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 Q9UFV3 132 aa14.89□□□□□ -0.03
COL18A1-205ENST00000423214 ERVK-19Q9WJR5 959 aa14.89□□□□□ -0.03
COL18A1-205ENST00000423214 PCDHGA11Q9Y5H2 935 aa14.89□□□□□ -0.03
COL18A1-205ENST00000423214 ITPR3Q14573 2671 aa14.88□□□□□ -0.03
COL18A1-205ENST00000423214 PRKRAO75569 313 aaKnown RBP14.88□□□□□ -0.03
COL18A1-205ENST00000423214 NADKO95544 446 aaPredicted RBP14.88□□□□□ -0.03
COL18A1-205ENST00000423214 C1QAP02745 245 aa14.88□□□□□ -0.03
COL18A1-205ENST00000423214 NR2F6P10588 404 aa14.88□□□□□ -0.03
COL18A1-205ENST00000423214 GFAPP14136 432 aa14.88□□□□□ -0.03
COL18A1-205ENST00000423214 SERPINB3P29508 390 aa14.88□□□□□ -0.03
COL18A1-205ENST00000423214 PIK3CBP42338 1070 aa14.88□□□□□ -0.03
COL18A1-205ENST00000423214 HNRNPH2P55795 449 aaKnown RBP14.88□□□□□ -0.03
COL18A1-205ENST00000423214 SPRED3Q2MJR0 410 aa14.88□□□□□ -0.03
COL18A1-205ENST00000423214 C18orf63Q68DL7 685 aa14.88□□□□□ -0.03
COL18A1-205ENST00000423214 RTL6Q6ICC9 239 aa14.88□□□□□ -0.03
COL18A1-205ENST00000423214 C8orf74Q6P047 294 aa14.88□□□□□ -0.03
COL18A1-205ENST00000423214 CYP20A1Q6UW02 462 aa14.88□□□□□ -0.03
COL18A1-205ENST00000423214 ZCCHC7Q8N3Z6 543 aaKnown RBP14.88□□□□□ -0.03
COL18A1-205ENST00000423214 FBF1Q8TES7 1133 aa14.88□□□□□ -0.03
COL18A1-205ENST00000423214 ZNF597Q96LX8 424 aa14.88□□□□□ -0.03
COL18A1-205ENST00000423214 WWTR1Q9GZV5 400 aa14.88□□□□□ -0.03
COL18A1-205ENST00000423214 ACTR8Q9H981 624 aa14.88□□□□□ -0.03
COL18A1-205ENST00000423214 ZFP64Q9NPA5 681 aa14.88□□□□□ -0.03
COL18A1-205ENST00000423214 CNIH4Q9P003 139 aa14.88□□□□□ -0.03
COL18A1-205ENST00000423214 SPRR3Q9UBC9 169 aa14.88□□□□□ -0.03
COL18A1-205ENST00000423214 OR6C76A6NM76 312 aa14.87□□□□□ -0.03
COL18A1-205ENST00000423214 HRKO00198 91 aa14.87□□□□□ -0.03
COL18A1-205ENST00000423214 ENDOUP21128 410 aaKnown RBP14.87□□□□□ -0.03
COL18A1-205ENST00000423214 GDF1P27539 372 aa14.87□□□□□ -0.03
COL18A1-205ENST00000423214 ARL1P40616 181 aaPredicted RBP14.87□□□□□ -0.03
COL18A1-205ENST00000423214 RPS13P62277 151 aaKnown RBP14.87□□□□□ -0.03
COL18A1-205ENST00000423214 GUCY2DQ02846 1103 aa14.87□□□□□ -0.03
COL18A1-205ENST00000423214 PCDH1Q08174 1060 aa14.87□□□□□ -0.03
COL18A1-205ENST00000423214 ZNF267Q14586 743 aaPredicted RBP14.87□□□□□ -0.03
COL18A1-205ENST00000423214 SETDB1Q15047 1291 aa14.87□□□□□ -0.03
COL18A1-205ENST00000423214 EBPQ15125 230 aaKnown RBP14.87□□□□□ -0.03
COL18A1-205ENST00000423214 FAM83EQ2M2I3 478 aa14.87□□□□□ -0.03
COL18A1-205ENST00000423214 RIPPLY2Q5TAB7 128 aa14.87□□□□□ -0.03
COL18A1-205ENST00000423214 LIPJQ5W064 366 aa14.87□□□□□ -0.03
COL18A1-205ENST00000423214 DGAT2L6Q6ZPD8 337 aa14.87□□□□□ -0.03
COL18A1-205ENST00000423214 CCDC91Q7Z6B0 441 aa14.87□□□□□ -0.03
COL18A1-205ENST00000423214 OR10G3Q8NGC4 313 aa14.87□□□□□ -0.03
COL18A1-205ENST00000423214 DOK4Q8TEW6 326 aa14.87□□□□□ -0.03
COL18A1-205ENST00000423214 KCTD4Q8WVF5 259 aa14.87□□□□□ -0.03
COL18A1-205ENST00000423214 DOHHQ9BU89 302 aa14.87□□□□□ -0.03
COL18A1-205ENST00000423214 SLC6A15Q9H2J7 730 aa14.87□□□□□ -0.03
COL18A1-205ENST00000423214 SH2D2AQ9NP31 389 aa14.87□□□□□ -0.03
COL18A1-205ENST00000423214 IGSF5Q9NSI5 407 aa14.87□□□□□ -0.03
COL18A1-205ENST00000423214 RYDENQ9NUL5 291 aaKnown RBP14.87□□□□□ -0.03
COL18A1-205ENST00000423214 QPCTLQ9NXS2 382 aa14.87□□□□□ -0.03
COL18A1-205ENST00000423214 ACOT9Q9Y305 439 aa14.87□□□□□ -0.03
COL18A1-205ENST00000423214 MPDZO75970 2070 aa14.86□□□□□ -0.03
COL18A1-205ENST00000423214 ZFHX3Q15911 3703 aa14.86□□□□□ -0.03
COL18A1-205ENST00000423214 KIAA1549Q9HCM3 1950 aa14.86□□□□□ -0.03
COL18A1-205ENST00000423214 A0A087X1B8 175 aa14.86□□□□□ -0.03
COL18A1-205ENST00000423214 LRRC3CA6NJW4 275 aa14.86□□□□□ -0.03
COL18A1-205ENST00000423214 GLOD5A6NK44 160 aa14.86□□□□□ -0.03
COL18A1-205ENST00000423214 LRATO95237 230 aa14.86□□□□□ -0.03
COL18A1-205ENST00000423214 FBXO45P0C2W1 286 aa14.86□□□□□ -0.03
COL18A1-205ENST00000423214 ADH7P40394 386 aa14.86□□□□□ -0.03
COL18A1-205ENST00000423214 TRPC1P48995 793 aa14.86□□□□□ -0.03
COL18A1-205ENST00000423214 TMED10P49755 219 aaKnown RBP14.86□□□□□ -0.03
COL18A1-205ENST00000423214 ARFIP1P53367 373 aa14.86□□□□□ -0.03
COL18A1-205ENST00000423214 WHAMMP3Q1A5X7 153 aa14.86□□□□□ -0.03
COL18A1-205ENST00000423214 C6orf163Q5TEZ5 329 aa14.86□□□□□ -0.03
COL18A1-205ENST00000423214 ADGRD1Q6QNK2 874 aa14.86□□□□□ -0.03
COL18A1-205ENST00000423214 LYPD8Q6UX82 237 aa14.86□□□□□ -0.03
COL18A1-205ENST00000423214 NUDT13Q86X67 352 aa14.86□□□□□ -0.03
COL18A1-205ENST00000423214 TAGAPQ8N103 731 aa14.86□□□□□ -0.03
COL18A1-205ENST00000423214 LRRC25Q8N386 305 aaPredicted RBP14.86□□□□□ -0.03
COL18A1-205ENST00000423214 RHEBL1Q8TAI7 183 aa14.86□□□□□ -0.03
COL18A1-205ENST00000423214 NEIL3Q8TAT5 605 aa14.86□□□□□ -0.03
COL18A1-205ENST00000423214 RIT1Q92963 219 aa14.86□□□□□ -0.03
COL18A1-205ENST00000423214 NXNL1Q96CM4 212 aa14.86□□□□□ -0.03
COL18A1-205ENST00000423214 MRRFQ96E11 262 aaKnown RBP14.86□□□□□ -0.03
COL18A1-205ENST00000423214 LRRC46Q96FV0 321 aa14.86□□□□□ -0.03
COL18A1-205ENST00000423214 DNAJB12Q9NXW2 375 aaKnown RBP14.86□□□□□ -0.03
COL18A1-205ENST00000423214 TSC22D4Q9Y3Q8 395 aa14.86□□□□□ -0.03
COL18A1-205ENST00000423214 L3MBTL1Q9Y468 752 aa14.86□□□□□ -0.03
COL18A1-205ENST00000423214 CHCHD2Q9Y6H1 151 aaPredicted RBP14.86□□□□□ -0.03
COL18A1-205ENST00000423214 C15orf38-AP3S2A0A0A6YYH1 394 aa14.85□□□□□ -0.03
COL18A1-205ENST00000423214 HSPB2A8KAH6 182 aa14.85□□□□□ -0.03
COL18A1-205ENST00000423214 CAPN14A8MX76 684 aa14.85□□□□□ -0.03
COL18A1-205ENST00000423214 PROM1O43490 865 aa14.85□□□□□ -0.03
COL18A1-205ENST00000423214 UGDHO60701 494 aa14.85□□□□□ -0.03
COL18A1-205ENST00000423214 GPR75O95800 540 aa14.85□□□□□ -0.03
COL18A1-205ENST00000423214 RFPL3SP0C7P2 107 aa14.85□□□□□ -0.03
COL18A1-205ENST00000423214 FAM58BPP0C7Q3 252 aa14.85□□□□□ -0.03
COL18A1-205ENST00000423214 PTX3P26022 381 aaPredicted RBP14.85□□□□□ -0.03
COL18A1-205ENST00000423214 DNAJA1P31689 397 aaKnown RBP14.85□□□□□ -0.03
COL18A1-205ENST00000423214 PIK3CGP48736 1102 aa14.85□□□□□ -0.03
COL18A1-205ENST00000423214 SLC37A1P57057 533 aa14.85□□□□□ -0.03
COL18A1-205ENST00000423214 IRF9Q00978 393 aa14.85□□□□□ -0.03
COL18A1-205ENST00000423214 HSPB2Q16082 182 aa14.85□□□□□ -0.03
COL18A1-205ENST00000423214 NTRK2Q16620 822 aa14.85□□□□□ -0.03
COL18A1-205ENST00000423214 CPSF6Q16630 551 aaKnown RBP eCLIP14.85□□□□□ -0.03
COL18A1-205ENST00000423214 PFKFB4Q16877 469 aa14.85□□□□□ -0.03
COL18A1-205ENST00000423214 TBCELQ5QJ74 424 aa14.85□□□□□ -0.03
COL18A1-205ENST00000423214 HLA-DQA1Q5Y7H0 255 aa14.85□□□□□ -0.03
COL18A1-205ENST00000423214 OR52E8Q6IFG1 317 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms